Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g044800.2.1
CDS Infomation

Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B (AHRD V3.3 *** K4DFG5_SOLLC)
Sequence

ATGAAAGGTGGTGTTGGTGGAGAAGTCGCGGAAGCTCCGGCGGGTCCACCACCGCCGCTA
GAGTGGAAATTTTCACAGGTTTTTGGTGAACGTACGGCTGGTGAAGAAGTGCAGGAAGTT
GATATCATCTCAGCAATTGAGTTTGATAAATCTGGTGACCATCTTGCCACTGGGGATCGT
GGTGGTAGAGTGGTATTGTTTGAAAGAACTGATACCAAGGAGCAGGTTGGTAGTCGACGA
GAGTTAGAGAGAGTGGACTATCCAGTTAGTCGGCATCCAGAGTTCCGCTACAAGACAGAA
TTTCAAAGCCACGAGCCTGAGTTTGATTATTTGAAGAGTTTGGAGATTGAGGAGAAAATC
AACAAGATCCGGTGGTGCCAAACAGCAAATGGTGCCCTTTTCCTTCTGTCTACTAATGAC
AAAACTATTAAGTATTGGAAGGCAATTTGCACGGATTGTTTGCAAAACAATTGTCTCATT
GTTTATGTCAGCCATGTCCAAGAGAAGAAAGTTAAGAAAATATCTGAAATGAATATTGAC
CCTTCGAAAGTTGCTGGAAATGGCAGTATAGCCAGTTCGAGTTTATGTTCCAGCCCAAAG
CAGTGTCTTGCAAATGGGGGCTGTGGAGATAAAGCTTACAGTTCTTTGAGCAATGATTTG
TCATTTCCGCCTGAGGGCATCCCCTCACTCCGTTTGCCCATGGTAGTTGTTCTATTAACC
TATTATATTATGTTTGTTTATGATGCTGATGACATGTCAAGTTTGTCAATCTATAGCCTT
CTGGTAACGAGCAACGAGACCAGCCTTCTTGCAAGGTGTAGAAGAGTGTATGCACATGCT
CATGACTACCATATTAATTCGATATCAAATAACAGTGATGGTGAAACATTCATATCAGCC
GATGATCTTCGAATAAACCTTTGGAACTTGGAAATAAGTAATCAAAGTTTCAATATTGTC
GATGTCAAGCCATCAAATATGGAAGATCTTACTGAGGTGATAACATCAGCAGAATTCCAT
CCTACACATTGTAACACATTAGCTTATAGTAGTTCAAAAGGATCAGTTCGTTTAATAGAT
TTGCGGCAGTCAGCATTGTGTGACTCACATTCTAAATTGTTTGAGGAACAGGAAGCACCT
GGTTCAAGATCTTTTTTCACCGAGATAATCGCTTCAATTTCAGATATAAAATTTGCGAAG
GATGGAAGATACATACTTAGTCGTGACTACATGACCCTTAAGAAAACAATTCAAACTGAG
GCAGTCGTTTTGCATTCACTCCGCGATACAGCGTTGCTTCCCATTCTATGGGACATAAAC
ATGGATTCAGGTCCAGTTTCAACATTCCAGGTTCATGAATATTTAAGACCAAAGCTTTGT
GACTTATATGAGAATGATTCCATCTTTGATAAATTTGAGTGTTGCCTTAGTGGTGATGGT
TCGCGAGTAGCAACGGGGTCTTATAGCAATCTTTTCCGCGTATTTGGCTGTGCTGCGGGG
AGCACTGAAGCAACTACCTTGGAAGCAAGCAAAAATCCTATGAGAAGACAAGTCCAGACT
CCTTCAAGGCCATCCAGGTCCTTGGGCAGCAGTTTAACACGTGTTGTCAGGAGAGGAGCT
GATAATGCCGGTGTTGATGCAAATGGAAACTCATTTGATTTTACGACAAAACTGCTTCAT
CTGGCATGGCATCCGACGGAAAATTCCATAGCATGTGCTGCCGCAAACAGCTTGTATATG
TATTACGCATAA

Peptide Sequence

PEP ID

Solyc12g044800.2.1
PEP Infomation

Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B (AHRD V3.3 *** K4DFG5_SOLLC)
Sequence

MKGGVGGEVAEAPAGPPPPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDR
GGRVVLFERTDTKEQVGSRRELERVDYPVSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKI
NKIRWCQTANGALFLLSTNDKTIKYWKAICTDCLQNNCLIVYVSHVQEKKVKKISEMNID
PSKVAGNGSIASSSLCSSPKQCLANGGCGDKAYSSLSNDLSFPPEGIPSLRLPMVVVLLT
YYIMFVYDADDMSSLSIYSLLVTSNETSLLARCRRVYAHAHDYHINSISNNSDGETFISA
DDLRINLWNLEISNQSFNIVDVKPSNMEDLTEVITSAEFHPTHCNTLAYSSSKGSVRLID
LRQSALCDSHSKLFEEQEAPGSRSFFTEIIASISDIKFAKDGRYILSRDYMTLKKTIQTE
AVVLHSLRDTALLPILWDINMDSGPVSTFQVHEYLRPKLCDLYENDSIFDKFECCLSGDG
SRVATGSYSNLFRVFGCAAGSTEATTLEASKNPMRRQVQTPSRPSRSLGSSLTRVVRRGA
DNAGVDANGNSFDFTTKLLHLAWHPTENSIACAAANSLYMYYA*

Transcript Sequence

Transcript ID

Solyc12g044800.2.1
Transcript Infomation

Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B (AHRD V3.3 *** K4DFG5_SOLLC)
Sequence

TCACCGACAAGTAATACCAACATATCTTCTGCAAAAATATAAAATGAAGAGAGAGAAAAA
AGAAGAATGATATTATAGATAGAACTTAACATTTTGGTACTTTTTCCGATGGCATAAAAC
GGTTCAATCTGTGTTATAGAAGCTAATACGTCGTCGTTTTATTGAATCTGAATCGATTAT
GGTGTTCTTCTGACGACGGCGATTCCAAAAAACCTACCGGCGATCGGTTCTGATGAAGTG
AACATTCTAGAATCTTCGATTTGATCGGCGGATTTTCAGTTTATTTATTTGGCTGTTATT
GATTTATTGGGAAAGAGGAAGAAATAAAGGGATTCAATGAAAGGTGGTGTTGGTGGAGAA
GTCGCGGAAGCTCCGGCGGGTCCACCACCGCCGCTAGAGTGGAAATTTTCACAGGTTTTT
GGTGAACGTACGGCTGGTGAAGAAGTGCAGGAAGTTGATATCATCTCAGCAATTGAGTTT
GATAAATCTGGTGACCATCTTGCCACTGGGGATCGTGGTGGTAGAGTGGTATTGTTTGAA
AGAACTGATACCAAGGAGCAGGTTGGTAGTCGACGAGAGTTAGAGAGAGTGGACTATCCA
GTTAGTCGGCATCCAGAGTTCCGCTACAAGACAGAATTTCAAAGCCACGAGCCTGAGTTT
GATTATTTGAAGAGTTTGGAGATTGAGGAGAAAATCAACAAGATCCGGTGGTGCCAAACA
GCAAATGGTGCCCTTTTCCTTCTGTCTACTAATGACAAAACTATTAAGTATTGGAAGGCA
ATTTGCACGGATTGTTTGCAAAACAATTGTCTCATTGTTTATGTCAGCCATGTCCAAGAG
AAGAAAGTTAAGAAAATATCTGAAATGAATATTGACCCTTCGAAAGTTGCTGGAAATGGC
AGTATAGCCAGTTCGAGTTTATGTTCCAGCCCAAAGCAGTGTCTTGCAAATGGGGGCTGT
GGAGATAAAGCTTACAGTTCTTTGAGCAATGATTTGTCATTTCCGCCTGAGGGCATCCCC
TCACTCCGTTTGCCCATGGTAGTTGTTCTATTAACCTATTATATTATGTTTGTTTATGAT
GCTGATGACATGTCAAGTTTGTCAATCTATAGCCTTCTGGTAACGAGCAACGAGACCAGC
CTTCTTGCAAGGTGTAGAAGAGTGTATGCACATGCTCATGACTACCATATTAATTCGATA
TCAAATAACAGTGATGGTGAAACATTCATATCAGCCGATGATCTTCGAATAAACCTTTGG
AACTTGGAAATAAGTAATCAAAGTTTCAATATTGTCGATGTCAAGCCATCAAATATGGAA
GATCTTACTGAGGTGATAACATCAGCAGAATTCCATCCTACACATTGTAACACATTAGCT
TATAGTAGTTCAAAAGGATCAGTTCGTTTAATAGATTTGCGGCAGTCAGCATTGTGTGAC
TCACATTCTAAATTGTTTGAGGAACAGGAAGCACCTGGTTCAAGATCTTTTTTCACCGAG
ATAATCGCTTCAATTTCAGATATAAAATTTGCGAAGGATGGAAGATACATACTTAGTCGT
GACTACATGACCCTTAAGAAAACAATTCAAACTGAGGCAGTCGTTTTGCATTCACTCCGC
GATACAGCGTTGCTTCCCATTCTATGGGACATAAACATGGATTCAGGTCCAGTTTCAACA
TTCCAGGTTCATGAATATTTAAGACCAAAGCTTTGTGACTTATATGAGAATGATTCCATC
TTTGATAAATTTGAGTGTTGCCTTAGTGGTGATGGTTCGCGAGTAGCAACGGGGTCTTAT
AGCAATCTTTTCCGCGTATTTGGCTGTGCTGCGGGGAGCACTGAAGCAACTACCTTGGAA
GCAAGCAAAAATCCTATGAGAAGACAAGTCCAGACTCCTTCAAGGCCATCCAGGTCCTTG
GGCAGCAGTTTAACACGTGTTGTCAGGAGAGGAGCTGATAATGCCGGTGTTGATGCAAAT
GGAAACTCATTTGATTTTACGACAAAACTGCTTCATCTGGCATGGCATCCGACGGAAAAT
TCCATAGCATGTGCTGCCGCAAACAGCTTGTATATGTATTACGCATAAGTCATAACAGGA
GATGTAGTTTCTTGGCTAGCATTTTTGGGTTGCTTTTCGGGAAAGGGTTTCTTTCAGAGC
AACTTGAGGTTCTACCATTTCTCACTTCCAGGTGCCTCAAAAAGGTGTAGGTCCATGCTT
TTGATGTCAGGGTCCAGATGTACCTGAAAGGATCACCAACAGAGCGACTTACATCTTCGT
GAGTGGACAGATGGCGTGGGATTCTTGCTCCCTTCTCCCTGTTTCTACTTCACCCTTTCC
GAGATCTCCTATTTTGTTGGGTTGAAGTCATGACAGAATGTCATTGTAGGTTCCTTACAA
GTAATACTGTTGGATGTGCAAACTTGCCACTAGTTCTAAGCTAAATATAGCTTTACTTGG
AATCTTGCTGAAAAGAGCAGCTGCTAACTTGCAATGGCGTTGAGCTTATTTTCATGGATA
GTCTTATTTTCTTTTGTAGGTTAACTTAGTGTGCTTTTTGCTATAGATTATTAACTAAAG
TAATTTTTTTCTTTCTGTAAAAGAAGTTCAAGAGAAACTGCATTTGTTTCTGTATTCTTT
CCTTTGGTGAAGTGTGGCTGGTACAGCTAAAACTTGTGTCAACTTCAGAATCTCAGTTTT
CAATTTGGATAAAAATTGCTAGTTTTACTTTGCTTCTGGACCAATGTGAGGAAACGTTTT
GTGACTAATATGAAGGAACATTTGTATTCATGTAGTGTGCATATCGCTCTTGGCTTTTTG
ACTTGTCAACTACAGGCAATGTTGGAAGTTTTTCAAGTAGTCTCATCTTTGCCCAAGTGC
TGTTATTTCTGTCTGACCCAACAAAAAAATAGTTAGAATTCCCATCAATGAAACTGTGTA
GTGAAGAACATTGGAAAAGTACTTGGCTCTCTCCTTAAAATAGACACTTGTACATTAACC
CTTCTTAGGGGAGCAAGAATCTGCATGCCAGTCCCCTTGAACTACCGGGGGATACAGGAA
CCATTTCTTATAGTTTGATGTTTGAAAATTGTTTTGATCAATTTAATTTTGGTGACGTGG
ACTTCTAATAAGAGGCCATGTGGAAAAAAA