Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc12g044270.2.1
CDS Infomation	rop guanine nucleotide exchange factor-like protein (AHRD V3.3 *** AT1G52240.1)
Sequence	ATGGTTCGAGCAGCGCTTGAGGAAGCGAAAGAAATGTGCAAGGCAAAGTTGTTGCATTTC AAAGGAAAATCTGAAGATGTTATTATTGAGACTAGTAATACTAGTGACTCTGGGGATGAA TTGGCCACATCGAAAAGTGAAGATCAGCCTGTGTTTAGTCGCAGTGAGTCTGTTATGATG CGACCAAACGAGACCCCTGTTGTCTCTAGCCCACCCGCGAAACAGGGCCCACCTTCAGAT ATGGAGCTGATGAGGGAAAAATTTGCAAAGTTGTTGCTTGGCGAGGATATGTCTGGTGGA GGAAAGGGTGTGTCTTCTGCGTTGGCATTGTCAAACGCGATAACAAACCTAGCAGCATCT GTGTTTGGGGAACAGAAGAGATTAGAGCCAATGCCAGCAGATAGAAAAGCCAAATGGAGA AGAGAAATCGATTGGTTGTTATCTGTAACAGATCATGTTGTTGAATTCGTTCCTTCTAAA CAAATATCAAAAGACGGAACAAGCATGGAGGTTATGGTGACAAAGCAGAGAAATGATCTT CAAATGAACGTTCCAGCTTTACGCAAGCTAGATGCTATGCTTCTTGATTGCTTAGATAGC TTTAAAGACCAAAATGAGTTCTCGTATGTATCAAAGGATGACGAATCACAGGAAGGGAGG AACGATGACAAATGGTGGATACCGACTCCTAAGGTTCCAAAGAATGGCTTGTCTGATGTT ACAAGGAAATGGCTGCAATTTCAAAAGGATTCAGTAAACCAAGTTCTTAAAGCAGCCATG GCCATAAATGCTCAAATCTTGTTAGAAATGGAAATCCCCGAAAGTTATATAGATTCCCTA CCTAAGAATGGGAGAGCAAGTCTTGGAGATACGATCTATAGGAGTATCACTGACGAATAC TTTGATCCCGACTACTTCCTCACAACTATGGACTTGTCTTCGGAGCATAAAATTTTAGAC CTCAAGAACAAACTTGAGGCTTCTGTTATTATTTGGAGACGAAAGATGACGTCTAAAGAT GGGAAGTCAGCATGGGGCTCTGCCGTTAGTGTAGAGAAGAGAGAAATCTTTGAAGACAGA GCCGAGACTATCTTGCTCATTCTTAAGCAGCGATTCCCTGGAATTCCTCAGTCATCTCTA GACATTAGCAAAATCCAATACAATGAGGACGTGGGGCAAGCTATTTTAGAAAGCTATTCA AGAATAATAGAGAGCAGGGCGCACACAGTGATGTCACGGATTGAAGATGTTCTCCAAGTA GATGCTACGGCCCAAAATCCTTCCTGTGCTGATCTGAAGAGGTCTCCTTTAAGAGATTCA CTACGGGTATCACCATCAGGCAGCTTCCCAAATGCTAGGGAAGAAGTAGAAAAGCTTAAC GCTGCAGAGAATCCAACGTCAATGACATTGTTGGATTTCATGGGTTGGACAGTAGAACAA GGAGATAATGACACAAAGAAAGATGTGAAGGAGGATATAGACGTCGATGCAAAGAAACCA CCTAGTATAGTTACAAACAAGAAACTTTCTTACTTAGATAACATAGTTGGTGCTAGAAGT CCAACTGCACGCCACTAA

Peptide Sequence

PEP ID	Solyc12g044270.2.1
PEP Infomation	rop guanine nucleotide exchange factor-like protein (AHRD V3.3 *** AT1G52240.1)
Sequence	MVRAALEEAKEMCKAKLLHFKGKSEDVIIETSNTSDSGDELATSKSEDQPVFSRSESVMM RPNETPVVSSPPAKQGPPSDMELMREKFAKLLLGEDMSGGGKGVSSALALSNAITNLAAS VFGEQKRLEPMPADRKAKWRREIDWLLSVTDHVVEFVPSKQISKDGTSMEVMVTKQRNDL QMNVPALRKLDAMLLDCLDSFKDQNEFSYVSKDDESQEGRNDDKWWIPTPKVPKNGLSDV TRKWLQFQKDSVNQVLKAAMAINAQILLEMEIPESYIDSLPKNGRASLGDTIYRSITDEY FDPDYFLTTMDLSSEHKILDLKNKLEASVIIWRRKMTSKDGKSAWGSAVSVEKREIFEDR AETILLILKQRFPGIPQSSLDISKIQYNEDVGQAILESYSRIIESRAHTVMSRIEDVLQV DATAQNPSCADLKRSPLRDSLRVSPSGSFPNAREEVEKLNAAENPTSMTLLDFMGWTVEQ GDNDTKKDVKEDIDVDAKKPPSIVTNKKLSYLDNIVGARSPTARH*

Transcript Sequence

Transcript ID	Solyc12g044270.2.1
Transcript Infomation	rop guanine nucleotide exchange factor-like protein (AHRD V3.3 *** AT1G52240.1)
Sequence	TCATCAAATTAGGAAAAAAAAAAAGTGACTTGTTTTCTATAAAACATGCACCGCACGTTG TCTCAACCATCCAAAAAAAATCTCTTCCATTCTCCATCAAAAGAGCAAAACTTTCTCTAA TTAAATTCCTTTTCTTTGCTAATTGAATCCATTTTCTTCTCTAAAACGCTAAAACTTTGC ATTAATTTTCCTTCTTTTCACCTCCTCTTTATATCCGTTTCCTCAAGAACAATTATATCT ATTGCATTGTCACTAGTGTAACATACCTATTTCAATTCAGCTTGAATCAAAAAGATGGTT CGAGCAGCGCTTGAGGAAGCGAAAGAAATGTGCAAGGCAAAGTTGTTGCATTTCAAAGGA AAATCTGAAGATGTTATTATTGAGACTAGTAATACTAGTGACTCTGGGGATGAATTGGCC ACATCGAAAAGTGAAGATCAGCCTGTGTTTAGTCGCAGTGAGTCTGTTATGATGCGACCA AACGAGACCCCTGTTGTCTCTAGCCCACCCGCGAAACAGGGCCCACCTTCAGATATGGAG CTGATGAGGGAAAAATTTGCAAAGTTGTTGCTTGGCGAGGATATGTCTGGTGGAGGAAAG GGTGTGTCTTCTGCGTTGGCATTGTCAAACGCGATAACAAACCTAGCAGCATCTGTGTTT GGGGAACAGAAGAGATTAGAGCCAATGCCAGCAGATAGAAAAGCCAAATGGAGAAGAGAA ATCGATTGGTTGTTATCTGTAACAGATCATGTTGTTGAATTCGTTCCTTCTAAACAAATA TCAAAAGACGGAACAAGCATGGAGGTTATGGTGACAAAGCAGAGAAATGATCTTCAAATG AACGTTCCAGCTTTACGCAAGCTAGATGCTATGCTTCTTGATTGCTTAGATAGCTTTAAA GACCAAAATGAGTTCTCGTATGTATCAAAGGATGACGAATCACAGGAAGGGAGGAACGAT GACAAATGGTGGATACCGACTCCTAAGGTTCCAAAGAATGGCTTGTCTGATGTTACAAGG AAATGGCTGCAATTTCAAAAGGATTCAGTAAACCAAGTTCTTAAAGCAGCCATGGCCATA AATGCTCAAATCTTGTTAGAAATGGAAATCCCCGAAAGTTATATAGATTCCCTACCTAAG AATGGGAGAGCAAGTCTTGGAGATACGATCTATAGGAGTATCACTGACGAATACTTTGAT CCCGACTACTTCCTCACAACTATGGACTTGTCTTCGGAGCATAAAATTTTAGACCTCAAG AACAAACTTGAGGCTTCTGTTATTATTTGGAGACGAAAGATGACGTCTAAAGATGGGAAG TCAGCATGGGGCTCTGCCGTTAGTGTAGAGAAGAGAGAAATCTTTGAAGACAGAGCCGAG ACTATCTTGCTCATTCTTAAGCAGCGATTCCCTGGAATTCCTCAGTCATCTCTAGACATT AGCAAAATCCAATACAATGAGGACGTGGGGCAAGCTATTTTAGAAAGCTATTCAAGAATA ATAGAGAGCAGGGCGCACACAGTGATGTCACGGATTGAAGATGTTCTCCAAGTAGATGCT ACGGCCCAAAATCCTTCCTGTGCTGATCTGAAGAGGTCTCCTTTAAGAGATTCACTACGG GTATCACCATCAGGCAGCTTCCCAAATGCTAGGGAAGAAGTAGAAAAGCTTAACGCTGCA GAGAATCCAACGTCAATGACATTGTTGGATTTCATGGGTTGGACAGTAGAACAAGGAGAT AATGACACAAAGAAAGATGTGAAGGAGGATATAGACGTCGATGCAAAGAAACCACCTAGT ATAGTTACAAACAAGAAACTTTCTTACTTAGATAACATAGTTGGTGCTAGAAGTCCAACT GCACGCCACTAA