Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc12g044220.2.1
CDS Infomation	Phox-associated domain,Phox-like,Sorting nexin isoform 1 (AHRD V3.3 *** A0A061GBL5_THECC)
Sequence	ATGAGCACCGAAAGGCAATCGGTGACTGTTCGAGACCTTGTTGAAGAAGCTAAGAAGAGA GTTGTTTTCTTAGTCATATGTGCTATTGGGCTCTCCTATTTAATGTCTCTGACGAGCTCC TCAGTTTTTGTCAACTTGCCTGTAGCTGCACTCTTTATTGTTTCCCTTCGTTATCTGTCT CTTGATTTTGACGCGCGGATGAAAGCTGTAACATATAAAAGTAAGTCATCCATATCAAAC AGCACTTTTCAGAGGAAACATATTGATATTCCAAGAACAGTTAATGAGAAGCCCACCTGG AGGAAGAAAGTAAATTCACCTGCTGTCGAAGAAGCAATAGATCACTTCACCAGGCATATA GTTTCTGAGTGGGTCACAGATCTCTGGTACTCCCGCATAACCTCTGATACACAGGGTCCT GAGGAACTAGTGCAGATCATGAATGGTGTACTAGGGGAAATTTCACGTCGCATGAGAACT ATTAATCTTATAGATCTCATCACAAGAGATATTATCAATCTAATACGCACTCACTTGGAG CTGTTTCGTGCAAGCAAAATAAAGATTCAGAAGAAACGCCCAATTTCTTTGACAATTGAA GAGCTAGATGTGGAGCTTAAACTGGTGTTGGCTGCAGACAACAAATTACATCCTGCTTTG TTTTCTCCGGAGGCTGAGCACAAAGTACTCCAGCATCTTATGGATGGTCTCATTTCATAC ACTTTTCAGTCAGAGGATGCACAGTGCTCTTTATTCCACAACATTGTCAGGGAGCTTCTT GCTTGTGTTGTAATGCGACCAGTATTAAATATAGCTAATCCAAGGTTCATCAACGAGAGG ATTGAGTCTCTAGTTGTTTCTGTAAAGAAGGGTGATAAAGGGAACACAGCAGCAGAAACT GAACCACAGTCCAGGCCGGTTGGATCTGGTAAAATATCAGCAGATCATTTTTCTCGGGTT TTAGATCCTTCTGCCAAGGGCGTAGAGCTTGTACAACTAAAAAATGACCAACCTAATAAC ACTGAGGAGCATGCCATGAACACTATGAATGGAACAGATTTGTTGTTGGACCCTTTGCTT TCACTTGATGCTCGGTCTACTCGTTCTTGGAGTTCTTTGCCATCACAAGCCGATGCAGAT GACGGAAGAGGTATTCATAGACACCATTCTGGAGGAGAGTGGGGTGAAAGGCTAGATTTG CTTTCTCGTAGAAAGACTGAAGCCCTGGCCCCTGAAAATTTAGACAATATATGGGCAAAA GGCAGAAACTATAAACGGAAAGAAGAGGCCAATCTAGCATCTGATAAACTCAAGAAGAGT TCGTTGATAAGTGCACCAAAATCGCCAGGACACTCAAAGGAAGCTAAACAGAAAGAGAGT GAGAGAGCAAACAAGGTTGGAGCTAAGCATTATGTGAAGGACAATGCTACCTCGCAAGGT GATTTGAAAAGACCAATTTATCCTCCAGATTACTCGTATCAAGAGGAAAATGAACATAGC TCAGATGAGGATGAATCAGAGAGCACTAGTTCTTACACTACTGAAGATGAAGAACCCAGC AGTGTGACTGGTTTTGACTCTCCAGGAACTCAAGTGTGGGATGGGAAAAATATAAGGAAT GTCAATCACATTCATCATCCACTTGAAAATAATGAAGGCCATAAGAGAAGAAATGGAAAA GCTAGTAAAACACATATTCGCTCTAAACACTTAAATAGAGTACTGTCTGGACGGAAAAGG TCTAGATTAAGCAACCAAACGGAACACTTGTGGCAAGAGACACAAAGAACCAGCTTCTTA CAGGGGGATGGACAAGATATATTAAAATCCAAAGAAAATGTGAAACTGGATGGTCCAAGT GATGACTCTGAGACAGAAATATTCAGTAGAATTTCTAGTGACACTAACGCATCATCATAT GTATCGTCAAGAAGCTTTTCGGAAATTCATAGTATGGGTCCTTATTCTACAACAGGTTCT ATAATTGCTGATTCTTTTTTGAAATTAAGAAGTGAGGTCCTGAGTGCTAATATCGTAAGA AGTGGCTCCAAAACTTTTGCTGTTTATTCCATATCTGTTACAGACATGAACAATAATAGT TGGTCTATCAAAAGAAGGTTTCAACATTTTGAGGAGCTACACTGGCGTCTTAAGGAGTTT CCGGAGTACAATCTTCATTTACCTCCCAAGCATTTCCTCTCTTCAAGTCTGGATGGTCCT GTCATTCGAGAACGGTGCAAATCACTTGACATATATTTGAAGAAACTTTTGCTGCTCCCA ACTGTTTCCAACTCCATCGAAGTATGGGACTTCCTCAGTGTGGATTCACAGACATATAGC TTCTCAAACTCCTTGTCCATAATTGAAACATTACAGGCTGACCTGGACAGGACTGTACGC CAAAAGAGTAAAGAACCTCCGCATGGTATAAGCCCTCGAACTGATCTGTTATCCTCCAAG GGGAAGCATTCTAATACTGAAAGCAAGAATCTGACTTCAAGGATAGAACACGATCATGCA GGACATGAATCAAGGTTCAGGAAAGATTATGTTGCACTCTCTCCTCCAAAAAGACCTCTC ACAGAAACTTTTGAGGATTCAAATAGTGACAACAAGGTGCATGCAAATAGAAAATCAACC CCAAACATGCAGACGACATCAAAATCAGTTGAAACTAACTCACTTGCATCACCTGAATCT CTTGTTGCTGCTACCGTGGATCCTACCTTTCCCAGTGAGTGGGTGCCACCAAATTTAACT GTGCCTATATTAGATCTTGTCGACGTCATTTTTCAGCTCCAAGATGGTGGATGGATCAGG AGGAATGCATTCTGGGTGGCTAAACAGGTTTTACAACTAGGAATGGGTGATGCATTTGAT GATTGGCTGATTGAGAAAATCCAGCGTCTGCGCAGGGGTTCAGTAGTTGCAGCAGGTATC CAACGTGTTGAGCAGATTCTCTGGCCGGATGGTATATTCATCACAAAGCACCCAGCACGT CAACATCCTGCTCCCACCTCATCCCCTAATTGTCCTCCAGGCCAACCTTCAACTCCATTA TCTTCGCCCAGGCTGGAGAATTCACAGAAACTGGATGAGATGCAGAAACTAGAAGCAGAG CAACGTGCAAAATTTGTTTATGAGCTAATGATTGATAAGGCACCAGCTGCTATTGTAGGA CTTGTTGGTCACAAAGAATACGAACAGTGTGCAAAGGATCTTTATTACTTCATCCAGTCA TCTGTGTGTATGAAGCAGTTAGTCCTTGATCTTCTCGAGCTATTACTGGTGTCCGCATTC CCAGAGCTGACTTCTGTATTTAACACATTGCATGAGGAGAAGGAGAGATTTGGAGAACTC AAAATAGATTAA

Peptide Sequence

PEP ID	Solyc12g044220.2.1
PEP Infomation	Phox-associated domain,Phox-like,Sorting nexin isoform 1 (AHRD V3.3 *** A0A061GBL5_THECC)
Sequence	MSTERQSVTVRDLVEEAKKRVVFLVICAIGLSYLMSLTSSSVFVNLPVAALFIVSLRYLS LDFDARMKAVTYKSKSSISNSTFQRKHIDIPRTVNEKPTWRKKVNSPAVEEAIDHFTRHI VSEWVTDLWYSRITSDTQGPEELVQIMNGVLGEISRRMRTINLIDLITRDIINLIRTHLE LFRASKIKIQKKRPISLTIEELDVELKLVLAADNKLHPALFSPEAEHKVLQHLMDGLISY TFQSEDAQCSLFHNIVRELLACVVMRPVLNIANPRFINERIESLVVSVKKGDKGNTAAET EPQSRPVGSGKISADHFSRVLDPSAKGVELVQLKNDQPNNTEEHAMNTMNGTDLLLDPLL SLDARSTRSWSSLPSQADADDGRGIHRHHSGGEWGERLDLLSRRKTEALAPENLDNIWAK GRNYKRKEEANLASDKLKKSSLISAPKSPGHSKEAKQKESERANKVGAKHYVKDNATSQG DLKRPIYPPDYSYQEENEHSSDEDESESTSSYTTEDEEPSSVTGFDSPGTQVWDGKNIRN VNHIHHPLENNEGHKRRNGKASKTHIRSKHLNRVLSGRKRSRLSNQTEHLWQETQRTSFL QGDGQDILKSKENVKLDGPSDDSETEIFSRISSDTNASSYVSSRSFSEIHSMGPYSTTGS IIADSFLKLRSEVLSANIVRSGSKTFAVYSISVTDMNNNSWSIKRRFQHFEELHWRLKEF PEYNLHLPPKHFLSSSLDGPVIRERCKSLDIYLKKLLLLPTVSNSIEVWDFLSVDSQTYS FSNSLSIIETLQADLDRTVRQKSKEPPHGISPRTDLLSSKGKHSNTESKNLTSRIEHDHA GHESRFRKDYVALSPPKRPLTETFEDSNSDNKVHANRKSTPNMQTTSKSVETNSLASPES LVAATVDPTFPSEWVPPNLTVPILDLVDVIFQLQDGGWIRRNAFWVAKQVLQLGMGDAFD DWLIEKIQRLRRGSVVAAGIQRVEQILWPDGIFITKHPARQHPAPTSSPNCPPGQPSTPL SSPRLENSQKLDEMQKLEAEQRAKFVYELMIDKAPAAIVGLVGHKEYEQCAKDLYYFIQS SVCMKQLVLDLLELLLVSAFPELTSVFNTLHEEKERFGELKID*

Transcript Sequence

Transcript ID	Solyc12g044220.2.1
Transcript Infomation	Phox-associated domain,Phox-like,Sorting nexin isoform 1 (AHRD V3.3 *** A0A061GBL5_THECC)
Sequence	CACAATGAGACGTGAGTAATTATTAGAACGGATACCTAACCAATCGCTACTCCACCTCCT TCTCAACATTTCCACACATTCAATTTCATCATATTGAAAATTGCAAAATCATCAAAATTC TACAGTACGATCATCTCTATTGTTGAAAGATCAAATTCAGCTTGTTTGTGACTGAGTTAT AGTAATTGTTGCTGCTGTAATTGTGTGGTCAATTAGGTAATCGATGATAATTGTGAAGGA TTTGATTTGAAAAAGCACAAAAAATGAGCACCGAAAGGCAATCGGTGACTGTTCGAGACC TTGTTGAAGAAGCTAAGAAGAGAGTTGTTTTCTTAGTCATATGTGCTATTGGGCTCTCCT ATTTAATGTCTCTGACGAGCTCCTCAGTTTTTGTCAACTTGCCTGTAGCTGCACTCTTTA TTGTTTCCCTTCGTTATCTGTCTCTTGATTTTGACGCGCGGATGAAAGCTGTAACATATA AAAGTAAGTCATCCATATCAAACAGCACTTTTCAGAGGAAACATATTGATATTCCAAGAA CAGTTAATGAGAAGCCCACCTGGAGGAAGAAAGTAAATTCACCTGCTGTCGAAGAAGCAA TAGATCACTTCACCAGGCATATAGTTTCTGAGTGGGTCACAGATCTCTGGTACTCCCGCA TAACCTCTGATACACAGGGTCCTGAGGAACTAGTGCAGATCATGAATGGTGTACTAGGGG AAATTTCACGTCGCATGAGAACTATTAATCTTATAGATCTCATCACAAGAGATATTATCA ATCTAATACGCACTCACTTGGAGCTGTTTCGTGCAAGCAAAATAAAGATTCAGAAGAAAC GCCCAATTTCTTTGACAATTGAAGAGCTAGATGTGGAGCTTAAACTGGTGTTGGCTGCAG ACAACAAATTACATCCTGCTTTGTTTTCTCCGGAGGCTGAGCACAAAGTACTCCAGCATC TTATGGATGGTCTCATTTCATACACTTTTCAGTCAGAGGATGCACAGTGCTCTTTATTCC ACAACATTGTCAGGGAGCTTCTTGCTTGTGTTGTAATGCGACCAGTATTAAATATAGCTA ATCCAAGGTTCATCAACGAGAGGATTGAGTCTCTAGTTGTTTCTGTAAAGAAGGGTGATA AAGGGAACACAGCAGCAGAAACTGAACCACAGTCCAGGCCGGTTGGATCTGGTAAAATAT CAGCAGATCATTTTTCTCGGGTTTTAGATCCTTCTGCCAAGGGCGTAGAGCTTGTACAAC TAAAAAATGACCAACCTAATAACACTGAGGAGCATGCCATGAACACTATGAATGGAACAG ATTTGTTGTTGGACCCTTTGCTTTCACTTGATGCTCGGTCTACTCGTTCTTGGAGTTCTT TGCCATCACAAGCCGATGCAGATGACGGAAGAGGTATTCATAGACACCATTCTGGAGGAG AGTGGGGTGAAAGGCTAGATTTGCTTTCTCGTAGAAAGACTGAAGCCCTGGCCCCTGAAA ATTTAGACAATATATGGGCAAAAGGCAGAAACTATAAACGGAAAGAAGAGGCCAATCTAG CATCTGATAAACTCAAGAAGAGTTCGTTGATAAGTGCACCAAAATCGCCAGGACACTCAA AGGAAGCTAAACAGAAAGAGAGTGAGAGAGCAAACAAGGTTGGAGCTAAGCATTATGTGA AGGACAATGCTACCTCGCAAGGTGATTTGAAAAGACCAATTTATCCTCCAGATTACTCGT ATCAAGAGGAAAATGAACATAGCTCAGATGAGGATGAATCAGAGAGCACTAGTTCTTACA CTACTGAAGATGAAGAACCCAGCAGTGTGACTGGTTTTGACTCTCCAGGAACTCAAGTGT GGGATGGGAAAAATATAAGGAATGTCAATCACATTCATCATCCACTTGAAAATAATGAAG GCCATAAGAGAAGAAATGGAAAAGCTAGTAAAACACATATTCGCTCTAAACACTTAAATA GAGTACTGTCTGGACGGAAAAGGTCTAGATTAAGCAACCAAACGGAACACTTGTGGCAAG AGACACAAAGAACCAGCTTCTTACAGGGGGATGGACAAGATATATTAAAATCCAAAGAAA ATGTGAAACTGGATGGTCCAAGTGATGACTCTGAGACAGAAATATTCAGTAGAATTTCTA GTGACACTAACGCATCATCATATGTATCGTCAAGAAGCTTTTCGGAAATTCATAGTATGG GTCCTTATTCTACAACAGGTTCTATAATTGCTGATTCTTTTTTGAAATTAAGAAGTGAGG TCCTGAGTGCTAATATCGTAAGAAGTGGCTCCAAAACTTTTGCTGTTTATTCCATATCTG TTACAGACATGAACAATAATAGTTGGTCTATCAAAAGAAGGTTTCAACATTTTGAGGAGC TACACTGGCGTCTTAAGGAGTTTCCGGAGTACAATCTTCATTTACCTCCCAAGCATTTCC TCTCTTCAAGTCTGGATGGTCCTGTCATTCGAGAACGGTGCAAATCACTTGACATATATT TGAAGAAACTTTTGCTGCTCCCAACTGTTTCCAACTCCATCGAAGTATGGGACTTCCTCA GTGTGGATTCACAGACATATAGCTTCTCAAACTCCTTGTCCATAATTGAAACATTACAGG CTGACCTGGACAGGACTGTACGCCAAAAGAGTAAAGAACCTCCGCATGGTATAAGCCCTC GAACTGATCTGTTATCCTCCAAGGGGAAGCATTCTAATACTGAAAGCAAGAATCTGACTT CAAGGATAGAACACGATCATGCAGGACATGAATCAAGGTTCAGGAAAGATTATGTTGCAC TCTCTCCTCCAAAAAGACCTCTCACAGAAACTTTTGAGGATTCAAATAGTGACAACAAGG TGCATGCAAATAGAAAATCAACCCCAAACATGCAGACGACATCAAAATCAGTTGAAACTA ACTCACTTGCATCACCTGAATCTCTTGTTGCTGCTACCGTGGATCCTACCTTTCCCAGTG AGTGGGTGCCACCAAATTTAACTGTGCCTATATTAGATCTTGTCGACGTCATTTTTCAGC TCCAAGATGGTGGATGGATCAGGAGGAATGCATTCTGGGTGGCTAAACAGGTTTTACAAC TAGGAATGGGTGATGCATTTGATGATTGGCTGATTGAGAAAATCCAGCGTCTGCGCAGGG GTTCAGTAGTTGCAGCAGGTATCCAACGTGTTGAGCAGATTCTCTGGCCGGATGGTATAT TCATCACAAAGCACCCAGCACGTCAACATCCTGCTCCCACCTCATCCCCTAATTGTCCTC CAGGCCAACCTTCAACTCCATTATCTTCGCCCAGGCTGGAGAATTCACAGAAACTGGATG AGATGCAGAAACTAGAAGCAGAGCAACGTGCAAAATTTGTTTATGAGCTAATGATTGATA AGGCACCAGCTGCTATTGTAGGACTTGTTGGTCACAAAGAATACGAACAGTGTGCAAAGG ATCTTTATTACTTCATCCAGTCATCTGTGTGTATGAAGCAGTTAGTCCTTGATCTTCTCG AGCTATTACTGGTGTCCGCATTCCCAGAGCTGACTTCTGTATTTAACACATTGCATGAGG AGAAGGAGAGATTTGGAGAACTCAAAATAGATTAAGTGGATCGTTTGCCAAAATGCCATT TTTCGTCGTACAATTTTAAGGGAAATCGTCAACAAGTTTATCCCGTTAATCATGGTATTC TTTCTGTGGAAGCACAAAATGCTAGGTTCATTTTGTCAAATATGTTGTCTGGAAATCCAC AAATGATGGATTAGTAAAAGCAAGATATGACTTAGTTATACTGAATTTGACTA