Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc12g043150.2.1
CDS Infomation	Regulator of Vps4 activity in the MVB pathway protein, putative (AHRD V3.3 *** A0A061GBK3_THECC)
Sequence	ATGAAACAAAATCATAGAGTTGAAGGCTCAATGGTTCAATTCCATCTTGGTAGGGAGATA ACTAATTTTGGTTCTTATTACTTTAAAAGAAGTGTGTCATGCTTTCAAAATAGACCCAAT TGCCATGACGATGGTGGTGAGACTATGAAGCCACTATCAATCTTCAATCAACCAGGCAAA GGTTCAAAAAAACGCACAAAGAGGAATCTTAGTGCCATTGAGTTGCAGTCTGCATCTACA CATGTCTTATTGAATTGCCCACAAGTTAAACCATTTGTTGATTACTTTGTGCATTTATAT GGCAATGAAAGATTATTTGAGAATTTCTCAAAGTGGTTTCAAGATTACATTTATGACACA AAAAATGGTCAATTTGACCAATTTTTGAAGGACATTTCTTGGGGATCCATCAAGACTTAT TCAATGAATAAGTATGTTGTTAATGGTTTTAAATTCACTACTGAAGAATACTCCAAATAT AAAAAAACTAACAATAGTGGAGTTTGGGTAAAAGGTGGTGATGGAAATCTAGAAGGAGTT GATTATTATGGGGTACTCAAGGAGTACTTGAGGTCATGTGTTTTGGATCCTAGATTAGAT TTTCCTTTGTGGACAATTAGCAAGTCTACAATCAAGCAGACAAAGACGCGAATCGAGATG ATCAGAAAAAAAAGAGATGCTATGTTGAAATATTTGAAGAATGATATGGCTGATCTTATT AAATCTGGAGCTGATATCAATGCCTATAGCAGGGCAGATGGCCTTGTAGTTGAGCTCAAT ATCTCGAGCTGTTACGATTTCTTGGAACAGTACTGTTTGCATATCTCGAGTCACCTCGCT ACCATGAGTAAACAGAGGGAGTGTCCGGAGGAATGCAGAGAAGCTGTATCGACTTTGATG TTTTCAGCAGCAAGACTATCTGATATACCAGAATTACGCGAACTGAGAGATATATTTAAT GAAAGATACGGAAATTCCCTTGAATGTTATGTGAATAAAGAGATTGTTAGTAAGCTTAAG TCTCAACCGTCTATAAAGGATATGAAGCTTCAGTTGATGCGAGATATAGCAGTAGAATCT GGTGTAAGATGGAATTCAAAGGCTTTGGAACATAAGCTATCGAAACCACAGATAGCTGTA CAAGACTCGCTGATGAGTCATAGTAATGAAGAGCACAAATTGCAGAAGAAAATCGATGAA TCAGTTCAGAGGAAAGAACATCAAAAGGCTAAGATTAATCACGAGAATGCAAGGACACAT ACGACTTCTAAGACGAAAAGGGAGAATCATTCATCTCATGGGAGAAAAGAAGTCCCTGGC GATGTACGTAGCTTGAGGGAGAGTGATAAACAGATCAGAGATAATATAAATCGCGCATCC AACAGATACTTAGATGACAAACCTCCAGTAAAAGATACTAAAGCAGATATTATTGGAAAA AATGGGCAACGGAATGATCCAAAGATCATTAAAAGTGTATCTGAGGAAAAATCTGATGAC AATACACCATTCTATTATAGACCAATTCAACCTAGTTACAACAAGTCAAGAGCCTGCATT GTTAAAATCAGTTCAGATACATCGGCTAACGTCTCCACAGGGAAAACACACGGACATACA GAGATGAATCAGAGGGGAATAACGATTGTTAAAGAAGAAGATAGTTGTGTAAATGATACA TTACAGAAGCCAAAACCGAAATCAGTTAGGACACGAATGCAGCCAATGCATGATTGTGAA GAGGACTCGCATAGAAGATTGAGACACGGAAAACATGGGATAAAAATTGCAAGTGGAGAT CATGTTGATCAACGCGATGAAGAGGAAAAGATGATGGATAGGCTTCTAATGCACTATACT AGGAAACAGGCTTCTAAAATTGAAGTTAAAACACCAAAACCAGTTGTTAAATTAGCTGAA GTTGAGAGCACTGAAGTATCAAGGAAGAGATCAATTCGTGTTGAATTGAAACAAGCAGGC CCTCCAGTGATACTTCGAGAAGGAGACACTCAAGCAAATCGCGATTCGTTGAGTCCAAAC GGGCATATACATCCCAAGCTGCCAGATTACGATGACTTTGTCACTCGACTAGCAGCTCTC AAAGGGAACTAA

Peptide Sequence

PEP ID	Solyc12g043150.2.1
PEP Infomation	Regulator of Vps4 activity in the MVB pathway protein, putative (AHRD V3.3 *** A0A061GBK3_THECC)
Sequence	MKQNHRVEGSMVQFHLGREITNFGSYYFKRSVSCFQNRPNCHDDGGETMKPLSIFNQPGK GSKKRTKRNLSAIELQSASTHVLLNCPQVKPFVDYFVHLYGNERLFENFSKWFQDYIYDT KNGQFDQFLKDISWGSIKTYSMNKYVVNGFKFTTEEYSKYKKTNNSGVWVKGGDGNLEGV DYYGVLKEYLRSCVLDPRLDFPLWTISKSTIKQTKTRIEMIRKKRDAMLKYLKNDMADLI KSGADINAYSRADGLVVELNISSCYDFLEQYCLHISSHLATMSKQRECPEECREAVSTLM FSAARLSDIPELRELRDIFNERYGNSLECYVNKEIVSKLKSQPSIKDMKLQLMRDIAVES GVRWNSKALEHKLSKPQIAVQDSLMSHSNEEHKLQKKIDESVQRKEHQKAKINHENARTH TTSKTKRENHSSHGRKEVPGDVRSLRESDKQIRDNINRASNRYLDDKPPVKDTKADIIGK NGQRNDPKIIKSVSEEKSDDNTPFYYRPIQPSYNKSRACIVKISSDTSANVSTGKTHGHT EMNQRGITIVKEEDSCVNDTLQKPKPKSVRTRMQPMHDCEEDSHRRLRHGKHGIKIASGD HVDQRDEEEKMMDRLLMHYTRKQASKIEVKTPKPVVKLAEVESTEVSRKRSIRVELKQAG PPVILREGDTQANRDSLSPNGHIHPKLPDYDDFVTRLAALKGN*

Transcript Sequence

Transcript ID	Solyc12g043150.2.1
Transcript Infomation	Regulator of Vps4 activity in the MVB pathway protein, putative (AHRD V3.3 *** A0A061GBK3_THECC)
Sequence	ATTAATGTTTTTAGATTAATATGTTGTTTAAATCAATGATAACAATGTATAATGTAGGAC TATTGGAAAGTCTAAACGGGGCATGAAACAAAATCATAGAGTTGAAGGCTCAATGGTTCA ATTCCATCTTGGTAGGGAGATAACTAATTTTGGTTCTTATTACTTTAAAAGAAGTGTGTC ATGCTTTCAAAATAGACCCAATTGCCATGACGATGGTGGTGAGACTATGAAGCCACTATC AATCTTCAATCAACCAGGCAAAGGTTCAAAAAAACGCACAAAGAGGAATCTTAGTGCCAT TGAGTTGCAGTCTGCATCTACACATGTCTTATTGAATTGCCCACAAGTTAAACCATTTGT TGATTACTTTGTGCATTTATATGGCAATGAAAGATTATTTGAGAATTTCTCAAAGTGGTT TCAAGATTACATTTATGACACAAAAAATGGTCAATTTGACCAATTTTTGAAGGACATTTC TTGGGGATCCATCAAGACTTATTCAATGAATAAGTATGTTGTTAATGGTTTTAAATTCAC TACTGAAGAATACTCCAAATATAAAAAAACTAACAATAGTGGAGTTTGGGTAAAAGGTGG TGATGGAAATCTAGAAGGAGTTGATTATTATGGGGTACTCAAGGAGTACTTGAGGTCATG TGTTTTGGATCCTAGATTAGATTTTCCTTTGTGGACAATTAGCAAGTCTACAATCAAGCA GACAAAGACGCGAATCGAGATGATCAGAAAAAAAAGAGATGCTATGTTGAAATATTTGAA GAATGATATGGCTGATCTTATTAAATCTGGAGCTGATATCAATGCCTATAGCAGGGCAGA TGGCCTTGTAGTTGAGCTCAATATCTCGAGCTGTTACGATTTCTTGGAACAGTACTGTTT GCATATCTCGAGTCACCTCGCTACCATGAGTAAACAGAGGGAGTGTCCGGAGGAATGCAG AGAAGCTGTATCGACTTTGATGTTTTCAGCAGCAAGACTATCTGATATACCAGAATTACG CGAACTGAGAGATATATTTAATGAAAGATACGGAAATTCCCTTGAATGTTATGTGAATAA AGAGATTGTTAGTAAGCTTAAGTCTCAACCGTCTATAAAGGATATGAAGCTTCAGTTGAT GCGAGATATAGCAGTAGAATCTGGTGTAAGATGGAATTCAAAGGCTTTGGAACATAAGCT ATCGAAACCACAGATAGCTGTACAAGACTCGCTGATGAGTCATAGTAATGAAGAGCACAA ATTGCAGAAGAAAATCGATGAATCAGTTCAGAGGAAAGAACATCAAAAGGCTAAGATTAA TCACGAGAATGCAAGGACACATACGACTTCTAAGACGAAAAGGGAGAATCATTCATCTCA TGGGAGAAAAGAAGTCCCTGGCGATGTACGTAGCTTGAGGGAGAGTGATAAACAGATCAG AGATAATATAAATCGCGCATCCAACAGATACTTAGATGACAAACCTCCAGTAAAAGATAC TAAAGCAGATATTATTGGAAAAAATGGGCAACGGAATGATCCAAAGATCATTAAAAGTGT ATCTGAGGAAAAATCTGATGACAATACACCATTCTATTATAGACCAATTCAACCTAGTTA CAACAAGTCAAGAGCCTGCATTGTTAAAATCAGTTCAGATACATCGGCTAACGTCTCCAC AGGGAAAACACACGGACATACAGAGATGAATCAGAGGGGAATAACGATTGTTAAAGAAGA AGATAGTTGTGTAAATGATACATTACAGAAGCCAAAACCGAAATCAGTTAGGACACGAAT GCAGCCAATGCATGATTGTGAAGAGGACTCGCATAGAAGATTGAGACACGGAAAACATGG GATAAAAATTGCAAGTGGAGATCATGTTGATCAACGCGATGAAGAGGAAAAGATGATGGA TAGGCTTCTAATGCACTATACTAGGAAACAGGCTTCTAAAATTGAAGTTAAAACACCAAA ACCAGTTGTTAAATTAGCTGAAGTTGAGAGCACTGAAGTATCAAGGAAGAGATCAATTCG TGTTGAATTGAAACAAGCAGGCCCTCCAGTGATACTTCGAGAAGGAGACACTCAAGCAAA TCGCGATTCGTTGAGTCCAAACGGGCATATACATCCCAAGCTGCCAGATTACGATGACTT TGTCACTCGACTAGCAGCTCTCAAAGGGAACTAACTAAAAGAAAAACTTTGTAGTCAATT ATTAGATGGAATTAACCATTGTACCATTCTAGCATACTAAACTAGAATTGTTAGAAGAAA CTAAATCATCGATGATATTACTACAGTTGTGGAGAAGACAATTATTATCAAATAAACCAC TTATATACTGTATTATAGTTACATTAGAGTGTCTACACAAGTTAAATGTCGATGAAATTG CATTTTGTTAGTGGTTCTTGTACATATCAAAGAATATAGAGCGATACATTCATAACTTGA GATTAATACAAAAGAACTTTTGGAATCAAAATAACTTCTAAATGCTATGCATTTCTATAT ATATCTTTGTTAATGTGGAAGGAACAACAGAAGCTCGACACATAGGACAATCTTTTTTTC TCAACAACCATTGTTTGATGCAGCCTGCGTGATATTCATGTCCGCATCCAAGTGTTCCAA CGATCTCTTCATGTTCGAATTCCATATGACATATGACACAAATTTCTTCAATTTCCTCTG GATTAATATTTACTCTGTCTTTAGGCACAACAATATGATGAGTTCTTGTTTTAATACTTC ATTATAGAGTCCTCCCCCTTTTGATTATCCTTATTGGCATTATCAATTGGCAGATTTGGC CAATTTTGATAATCTGACCTCAAGGGTCTATCTATCCAATCGCGATCACTCAAATTAGTA ATATTTATTTCATCATCCATGATTATAAGGGGTTTTCTTTTAATTGTTGAAAGAAGAAAT CAAGTTATAATAATAAGTTCTCAAAACAATAAAATATTTATAGAGATGCACATGATATTT CCTACTTTGTTAATAAGTTGTATTTCCTAGGTTTGTTTCAAATAGGATTTATGGATATGA TCGGTATTAGTTCCATTTATGGTAATATTACTATTATTAAATCTATTTAGAAAGTAATAG TAATAATATTATTACTTGATAAATAGGTTTAATATCATAAACTTTTTGTTATTTTTGAAA CTTAAAGAGTCCAAAGAACAACGGAAATATCGTAAAAAAATAATCTCTTCAGATTTGCCC TTTTAAAAAATGCAAACATTAATGTAATTAGCGAGCACCCT