Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc12g043070.2.1
CDS Infomation	E3 ubiquitin-protein ligase SHPRH (AHRD V3.3 - A0A151U027_CAJCA)
Sequence	ATGGGTCGGAAGAAATCTAAGCCAAATCATTCTGTTGGAATTTTGGAAGGAGAAGTTCCT AAGGGGAAATTAAACGGTGAAACAGATGCTGGAACTGCGGAAAAAGATGAGTCTTTTGTA GTTGATGTGCCATTTTTTGTTGAAATTGATAGGTCTAATTGGTTATTGGACAAACATATG GATATTTCTGAAATTGTTTTATCAAACTTGAATGTTAGTGATGAGTTTGGTACTTATGTA TTGGATGAGGATTTTTTCAGGGATTCTAGGTATTTATTGAGGTTTAGGGTCAGTAATGTT AATGAGCATCTTACTAGGATAAAGTTGGGTCATTGGCCTGTATTATCTGCTACTAGTGTA TGTCTTGAAATTGTAGCAAAGCAGGAGAAAGAGGGTTTGGAGGAAACAGTTGTGTTGATA GAGGGAAGTTTTGATGGACCTGATGAGGGTATATCAGGGTTAGTCCATCTGGCTAGTTTG AAGTTCTTCACATTGAGGACTGTTATTGTTCCGAGTTATTTAGCATCTATACGGATGAAG GTCGAGATTTTGAAAAGTGCCTTTGATGGGTGTGAGTCACTTCTGGATACATCCAGACAG CTATGGAAAAAGAGCATGATGAATGTGATGGCTTGGCTACGTCCAGAGGTTGTCACAGCA GAGGCTAGATATGGATACCAGGTGGAAGCACATGCAGATATTGGTCTAGCTTCGGGGCTG GATGAAAGTTCTTCTTCTGCAAGGAAACTTTCTAGGTTTGATGTAGCTAGTTTCTATGAA GCTATTAAGCCATCAAAGGAGGAGCCGATGCTTGATGATGACCTCCCTGGTTTGCTTCCT AAGCTTAGACCTTACCAGCGCCGTGCTGCTTATTGGATGGTGCAGAGGGAGAAAAGAAAT TCCGATGGCTCCTTCCTAAGCAAAATAAATCACTTTATTTCTCCTCTGTGTATGCCACTG AGTTTAATTGACACCCCTATAACAATATATTACAATCCATTTTGGTATGTTTCTCTTTCT ATGATCTACAGAAAATGTTATCATTGGATTCACTGTACTTCTACCATCCGTTGA

Peptide Sequence

PEP ID	Solyc12g043070.2.1
PEP Infomation	E3 ubiquitin-protein ligase SHPRH (AHRD V3.3 - A0A151U027_CAJCA)
Sequence	MGRKKSKPNHSVGILEGEVPKGKLNGETDAGTAEKDESFVVDVPFFVEIDRSNWLLDKHM DISEIVLSNLNVSDEFGTYVLDEDFFRDSRYLLRFRVSNVNEHLTRIKLGHWPVLSATSV CLEIVAKQEKEGLEETVVLIEGSFDGPDEGISGLVHLASLKFFTLRTVIVPSYLASIRMK VEILKSAFDGCESLLDTSRQLWKKSMMNVMAWLRPEVVTAEARYGYQVEAHADIGLASGL DESSSSARKLSRFDVASFYEAIKPSKEEPMLDDDLPGLLPKLRPYQRRAAYWMVQREKRN SDGSFLSKINHFISPLCMPLSLIDTPITIYYNPFWYVSLSMIYRKCYHWIHCTSTIR*

Transcript Sequence

Transcript ID	Solyc12g043070.2.1
Transcript Infomation	E3 ubiquitin-protein ligase SHPRH (AHRD V3.3 - A0A151U027_CAJCA)
Sequence	GGAACAGGGCTTCTAAAAGTTTCTAAAAACATCCATTTCTAAAGAGCAGCTGAAGAACGT AGGTGAAGTGAAGATCGAAGAGAACAAGCTGAAGAACGTAGCTGACTGAAGAACGTAGTT GAGCTGAAGAACTTAGGTTAACTGAAGTACTGATCAACATCTGAGCTGCAGATTGTCTTC TCTAGAACATGATTTTCTCAAAGGGATGAAATGTTGAAGCTTAAGAACTGTGGATCGAAG AACTAAAGTGTGGAATCTGAAAAATCTAAAGAGCTTAGCTGAAGAACTAAAGTGTGGATG AAAGTGCCTTCTGTCGCTTGTACTAGTAGAGTACTTTTTTTTTCAATTCTCTACAGAATT CACCTCGGAAATTTTGTAGCTTATTTCACTTCTATTGGTTTTCCGAGAAACCGTTCAAAT TATGTACCAAATATTTGTTAGTTCATGTGAGACTCTTTATTATTTACAGGTTCTTGGTTG TTCGAATAAGAATAAAGGATTGGTTTTTATCCGTTAACCGTATTGCACTTTGTATATCTT ACTTGTTACTGCAATGGGTCGGAAGAAATCTAAGCCAAATCATTCTGTTGGAATTTTGGA AGGAGAAGTTCCTAAGGGGAAATTAAACGGTGAAACAGATGCTGGAACTGCGGAAAAAGA TGAGTCTTTTGTAGTTGATGTGCCATTTTTTGTTGAAATTGATAGGTCTAATTGGTTATT GGACAAACATATGGATATTTCTGAAATTGTTTTATCAAACTTGAATGTTAGTGATGAGTT TGGTACTTATGTATTGGATGAGGATTTTTTCAGGGATTCTAGGTATTTATTGAGGTTTAG GGTCAGTAATGTTAATGAGCATCTTACTAGGATAAAGTTGGGTCATTGGCCTGTATTATC TGCTACTAGTGTATGTCTTGAAATTGTAGCAAAGCAGGAGAAAGAGGGTTTGGAGGAAAC AGTTGTGTTGATAGAGGGAAGTTTTGATGGACCTGATGAGGGTATATCAGGGTTAGTCCA TCTGGCTAGTTTGAAGTTCTTCACATTGAGGACTGTTATTGTTCCGAGTTATTTAGCATC TATACGGATGAAGGTCGAGATTTTGAAAAGTGCCTTTGATGGGTGTGAGTCACTTCTGGA TACATCCAGACAGCTATGGAAAAAGAGCATGATGAATGTGATGGCTTGGCTACGTCCAGA GGTTGTCACAGCAGAGGCTAGATATGGATACCAGGTGGAAGCACATGCAGATATTGGTCT AGCTTCGGGGCTGGATGAAAGTTCTTCTTCTGCAAGGAAACTTTCTAGGTTTGATGTAGC TAGTTTCTATGAAGCTATTAAGCCATCAAAGGAGGAGCCGATGCTTGATGATGACCTCCC TGGTTTGCTTCCTAAGCTTAGACCTTACCAGCGCCGTGCTGCTTATTGGATGGTGCAGAG GGAGAAAAGAAATTCCGATGGCTCCTTCCTAAGCAAAATAAATCACTTTATTTCTCCTCT GTGTATGCCACTGAGTTTAATTGACACCCCTATAACAATATATTACAATCCATTTTGGTA TGTTTCTCTTTCTATGATCTACAGAAAATGTTATCATTGGATTCACTGTACTTCTACCAT CCGTTGAAGTTTTTCATCCATGGTTCATCCATTATGTCCCTTATGATAAAATGGACACTT TCAACTGTTGGCACTAACTGAATTTGATTTTGCTATCGTGCATTTTATGAATTCAAAATG TGGATGATCAACTTCTCGTCATCTTTTGTTCTTTGGATTGGGGTGTGACTTGCTATGTAC ATCCCTAATTCCAGAACAAGTATCCATGTTCCCCTTCTTTTTTCTTGCAAATATGAATGG TAAAATTCGTCTTCCTGATAAGGCA