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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g042655.1.1
CDS Infomation

F-box/RNI-like superfamily protein (AHRD V3.3 *** AT1G13570.3)
Sequence

ATGAATCAAGATGGAGTAAGCGTTGCGGTTGAGGGGGACATAGAAGATAGAATTAGTGTC
CTACCAAGAAATGTTATTGATTGTATCCTTGAGCTCTTGCCTATTAAAGAAGCTGCAAAA
ACTTGTACATTGTCCAAAAGCTGGAGATACATTTGGAGCGAGCTTCCAAAACTGGTGCTG
TATTACGAGTTTTGTGATGAGTTAATAGATGAGTCTGAATCCAAATTCAGAGAAGTAGTA
GACGGGATTATGTTACTGCATATGGGCAAGATTGTGCAGTTTGATCTTGACGTTAGAGTA
GAAGATTTAGCTTCATATACAGCTATTGATAGGTGGGTTCTTTATGTCACCAGAAATAGT
GTCAAGAAGCTACACCTTAGAATTTCTAATATTGATGATCGTAGCTATGCACTGCCTCCT
TGTGTATTTCACTGTTCAACCCTGACACAGTTGAAACTTGCTAGATGTTCCTTTAAACCA
CCTGATTCTTTTCGTGGCTTTCCCAATCTTGTAACCCTTCGGTTGGCATCAGTAACCTTT
TCAGAGCATTGTGTTATCAAGGCCCCTCTTCTTGCTAATTTGACCTTGAACTGTTGTGAT
GGTATGCAATACCTAAACATTGTTTCACCAGTGTTGAAGTCCTTGTATGTTTGTTACCCT
CACTCCTATATCGCACTAAATTGCTTCATGAACTGCAAGAATTTGAGAGATTTAGGACTT
GTGTTTTCCAAAGTGGTTAATAATCCAAAACATGATCATAGATCAACATTGATGAAACTT
CTTGATAGCTTGCCTGCACTTGAGGTACTCCTGTTGGATTCACTTTTCATTGAGCTTTTG
AGTGCAGACGTAGTTCTATCAAGTGCTCCTCCTTTTATTCTCAACTGCTTGCAGAAGCTG
TCCCTCTCTGTTGACTTTGGAAAATTGGGTCATAGTTCTTGCGTTCTACAATTAATCAAG
TGTTCCCCCAATTTGAGTGAACTTAAGATTAGGGTAAGAAATGTCAAAGGTACCGATGAT
AATGTTGAAGCATTTGTGAAATGTCTGATGACGCCTGACTGCTTGCAACTACCATTGAAC
AAGCTAGAGTATGTGAGTTTCTATGGTTTCGCGAGTCCAAACTGTGTACAGGCCTTTGCT
ATGCTATTCATTTTTCAGGCACCGTCTTTGCTAAGGATCTTCATTGAACAACCGATAGGA
ACTAAATCCAGTAAAGATTTGAGTGATTTACCCAGAGCTTCTTCTAAGGTTGAGCTAGTT
ATAAGGTAA

Peptide Sequence

PEP ID

Solyc12g042655.1.1
PEP Infomation

F-box/RNI-like superfamily protein (AHRD V3.3 *** AT1G13570.3)
Sequence

MNQDGVSVAVEGDIEDRISVLPRNVIDCILELLPIKEAAKTCTLSKSWRYIWSELPKLVL
YYEFCDELIDESESKFREVVDGIMLLHMGKIVQFDLDVRVEDLASYTAIDRWVLYVTRNS
VKKLHLRISNIDDRSYALPPCVFHCSTLTQLKLARCSFKPPDSFRGFPNLVTLRLASVTF
SEHCVIKAPLLANLTLNCCDGMQYLNIVSPVLKSLYVCYPHSYIALNCFMNCKNLRDLGL
VFSKVVNNPKHDHRSTLMKLLDSLPALEVLLLDSLFIELLSADVVLSSAPPFILNCLQKL
SLSVDFGKLGHSSCVLQLIKCSPNLSELKIRVRNVKGTDDNVEAFVKCLMTPDCLQLPLN
KLEYVSFYGFASPNCVQAFAMLFIFQAPSLLRIFIEQPIGTKSSKDLSDLPRASSKVELV
IR*

Transcript Sequence

Transcript ID

Solyc12g042655.1.1
Transcript Infomation

F-box/RNI-like superfamily protein (AHRD V3.3 *** AT1G13570.3)
Sequence

CTAAAGAATACCAAATCATGCGTTTAAAATCTTTAATCAAATATGTTAGTACGAAAATAC
ATTAAATAGTAAAAGCATTTCACTCCGGTTCTGCTCTTCGCCGTCGCCGGCAGTCTTCGC
TGAGAGCAAGACACCTCTTTGCACAAATTATGCACTATTGCTAGTAAGGTGGGAAAAAAA
TCAAATCAGAAAAAGAAAATCAAACATGAATCAAGATGGAGTAAGCGTTGCGGTTGAGGG
GGACATAGAAGATAGAATTAGTGTCCTACCAAGAAATGTTATTGATTGTATCCTTGAGCT
CTTGCCTATTAAAGAAGCTGCAAAAACTTGTACATTGTCCAAAAGCTGGAGATACATTTG
GAGCGAGCTTCCAAAACTGGTGCTGTATTACGAGTTTTGTGATGAGTTAATAGATGAGTC
TGAATCCAAATTCAGAGAAGTAGTAGACGGGATTATGTTACTGCATATGGGCAAGATTGT
GCAGTTTGATCTTGACGTTAGAGTAGAAGATTTAGCTTCATATACAGCTATTGATAGGTG
GGTTCTTTATGTCACCAGAAATAGTGTCAAGAAGCTACACCTTAGAATTTCTAATATTGA
TGATCGTAGCTATGCACTGCCTCCTTGTGTATTTCACTGTTCAACCCTGACACAGTTGAA
ACTTGCTAGATGTTCCTTTAAACCACCTGATTCTTTTCGTGGCTTTCCCAATCTTGTAAC
CCTTCGGTTGGCATCAGTAACCTTTTCAGAGCATTGTGTTATCAAGGCCCCTCTTCTTGC
TAATTTGACCTTGAACTGTTGTGATGGTATGCAATACCTAAACATTGTTTCACCAGTGTT
GAAGTCCTTGTATGTTTGTTACCCTCACTCCTATATCGCACTAAATTGCTTCATGAACTG
CAAGAATTTGAGAGATTTAGGACTTGTGTTTTCCAAAGTGGTTAATAATCCAAAACATGA
TCATAGATCAACATTGATGAAACTTCTTGATAGCTTGCCTGCACTTGAGGTACTCCTGTT
GGATTCACTTTTCATTGAGCTTTTGAGTGCAGACGTAGTTCTATCAAGTGCTCCTCCTTT
TATTCTCAACTGCTTGCAGAAGCTGTCCCTCTCTGTTGACTTTGGAAAATTGGGTCATAG
TTCTTGCGTTCTACAATTAATCAAGTGTTCCCCCAATTTGAGTGAACTTAAGATTAGGGT
AAGAAATGTCAAAGGTACCGATGATAATGTTGAAGCATTTGTGAAATGTCTGATGACGCC
TGACTGCTTGCAACTACCATTGAACAAGCTAGAGTATGTGAGTTTCTATGGTTTCGCGAG
TCCAAACTGTGTACAGGCCTTTGCTATGCTATTCATTTTTCAGGCACCGTCTTTGCTAAG
GATCTTCATTGAACAACCGATAGGAACTAAATCCAGTAAAGATTTGAGTGATTTACCCAG
AGCTTCTTCTAAGGTTGAGCTAGTTATAAGGTAAATCGATATGATAGTTGTCAATAAGTG
TATCTAATATGTCACAAATGTTCATCTAGTTTTCTTTCATATTTACAGTTGGGAAAGTAT
GACTCATTGCAGTCCTGCTATTCCAACATATCTGAATCTTCATCTTTTGACAGTTAAGCT
TGTTTTGGTCTCTATATCTACACGAGGTCAATGTAAGATTT