Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g042600.2.1
CDS Infomation

Glycosyltransferase (AHRD V3.3 *** K4DF51_SOLLC)
Sequence

ATGGCAAATGTTACTCGTGATGATGAGCCACCACATTTTGTGTTACTTCCTTTTATGGCA
CAAGGCCATACAATCCCTATAATAGACATAGCTCGTTTGTTAGCACAAAGAGGTGTTATT
GTCACAATACTTATGACACCTTTAAATGCCACAAGGTTCAATAATGTCATAGCCCGCGCA
GTCGAAAAAGGACTCAATATTCATATAATTCACCTCAAGTTTCCAAGTTTAGAGGCAGGG
TTACCACAAGATTGTGAAAATTGTGACATGATTTTATCAATGGACATGATAAAGAAGTTC
TTTAATGCTACTCAAATGCTTGAGACACAAGTGGAACTGTTGTTGCAAGATTTGAAACCA
AATTGTCTAATTTCTGATTTGTGTTTTCCTTGGACAACAAATGTTGCTAAGAGAATTGGC
ATACCTAGGATTGTTTTTCATGGGATGGGAAGTTTCTCTTTGTTGTGTTTGCATAATTTG
AGAGATGTGAATTTGTTGGAGAGTGTTGAATCTGAGAATGAATACTTTTTTGTACCTGGA
CTTCCAAACAAAGTTGAAGTGACTAAAGCTCAAGTAAAAGCAATGGTGGATCCATCCAAT
CCTGAATGGAAAAAATTTGGAGACCAAATGAAGGAGGGAGAGGCTCAAGCTTATGGAATT
GTGGTCAATAGCTTTGAGGAGTTGGAACCTCAATATGTGCAAGGAGTGAAAAGGGCCAAA
GGTAAGAAAGTTTGGTCAATTGGTCCTGTTTCCTTGTGCAACAAAGAGAAACAAGACAAA
GTTGAAAGAGGAAACAAGGCTTCAATTGATGAACACCACTGCCTAAAATGGCTTGATTCT
AAGGCACAAGACTCCGTGCTCTACGTTTGTCTTGGAAGTCTATCACACTTGCCAACATCC
CAAATGATTGAACTTGCACTTGGCTTAGAGTCATCTAAACAACCCTTCGTATGGGTCATT
AGACACATATCAAATGGATTTAGAAAATGGCTAAATGAAGAGAACTTTGAGGAAAGAGTT
CAAAAACAAGGGATTTTAATCAATGGTTGGGCACCACAAGTACTAATACTATCTCATCCT
TCGATAGGAGGATTCCTGACACACTGTGGATGGAACTCGATCTTAGAAGGGATATCGGTT
GGTGTCCCAATGATCACTTGGCCATTATTTTCTGAACAATTTTGTAATGAGAAGCTTATT
GTGAATGTACTCAAGACAGGAGTGAAGGGTGGTATGGAGAATCCAGTGATGTTTTTAGAG
GATGAAAAAGGATGTGCACAAGTGAAGAAAGATGATATTAAGATGGTTATTGAAAGATTA
ATGGGTGAAGAAGAGGAAGCAAAAATGAGAAGAGAAAGAGCTAAAGGGCTTGCAGATATG
GCAACAAAGGCTGTGGAGGAAGGAGGTTCATCTCACATTAATTTGACAAAACTAATAGAA
GATGTCACACAACAACCAAAAATTGGGGGTTTAAAGTCTAGATAA

Peptide Sequence

PEP ID

Solyc12g042600.2.1
PEP Infomation

Glycosyltransferase (AHRD V3.3 *** K4DF51_SOLLC)
Sequence

MANVTRDDEPPHFVLLPFMAQGHTIPIIDIARLLAQRGVIVTILMTPLNATRFNNVIARA
VEKGLNIHIIHLKFPSLEAGLPQDCENCDMILSMDMIKKFFNATQMLETQVELLLQDLKP
NCLISDLCFPWTTNVAKRIGIPRIVFHGMGSFSLLCLHNLRDVNLLESVESENEYFFVPG
LPNKVEVTKAQVKAMVDPSNPEWKKFGDQMKEGEAQAYGIVVNSFEELEPQYVQGVKRAK
GKKVWSIGPVSLCNKEKQDKVERGNKASIDEHHCLKWLDSKAQDSVLYVCLGSLSHLPTS
QMIELALGLESSKQPFVWVIRHISNGFRKWLNEENFEERVQKQGILINGWAPQVLILSHP
SIGGFLTHCGWNSILEGISVGVPMITWPLFSEQFCNEKLIVNVLKTGVKGGMENPVMFLE
DEKGCAQVKKDDIKMVIERLMGEEEEAKMRRERAKGLADMATKAVEEGGSSHINLTKLIE
DVTQQPKIGGLKSR*

Transcript Sequence

Transcript ID

Solyc12g042600.2.1
Transcript Infomation

Glycosyltransferase (AHRD V3.3 *** K4DF51_SOLLC)
Sequence

AGGTAACACAAAACACATATCAAAATGGCAAATGTTACTCGTGATGATGAGCCACCACAT
TTTGTGTTACTTCCTTTTATGGCACAAGGCCATACAATCCCTATAATAGACATAGCTCGT
TTGTTAGCACAAAGAGGTGTTATTGTCACAATACTTATGACACCTTTAAATGCCACAAGG
TTCAATAATGTCATAGCCCGCGCAGTCGAAAAAGGACTCAATATTCATATAATTCACCTC
AAGTTTCCAAGTTTAGAGGCAGGGTTACCACAAGATTGTGAAAATTGTGACATGATTTTA
TCAATGGACATGATAAAGAAGTTCTTTAATGCTACTCAAATGCTTGAGACACAAGTGGAA
CTGTTGTTGCAAGATTTGAAACCAAATTGTCTAATTTCTGATTTGTGTTTTCCTTGGACA
ACAAATGTTGCTAAGAGAATTGGCATACCTAGGATTGTTTTTCATGGGATGGGAAGTTTC
TCTTTGTTGTGTTTGCATAATTTGAGAGATGTGAATTTGTTGGAGAGTGTTGAATCTGAG
AATGAATACTTTTTTGTACCTGGACTTCCAAACAAAGTTGAAGTGACTAAAGCTCAAGTA
AAAGCAATGGTGGATCCATCCAATCCTGAATGGAAAAAATTTGGAGACCAAATGAAGGAG
GGAGAGGCTCAAGCTTATGGAATTGTGGTCAATAGCTTTGAGGAGTTGGAACCTCAATAT
GTGCAAGGAGTGAAAAGGGCCAAAGGTAAGAAAGTTTGGTCAATTGGTCCTGTTTCCTTG
TGCAACAAAGAGAAACAAGACAAAGTTGAAAGAGGAAACAAGGCTTCAATTGATGAACAC
CACTGCCTAAAATGGCTTGATTCTAAGGCACAAGACTCCGTGCTCTACGTTTGTCTTGGA
AGTCTATCACACTTGCCAACATCCCAAATGATTGAACTTGCACTTGGCTTAGAGTCATCT
AAACAACCCTTCGTATGGGTCATTAGACACATATCAAATGGATTTAGAAAATGGCTAAAT
GAAGAGAACTTTGAGGAAAGAGTTCAAAAACAAGGGATTTTAATCAATGGTTGGGCACCA
CAAGTACTAATACTATCTCATCCTTCGATAGGAGGATTCCTGACACACTGTGGATGGAAC
TCGATCTTAGAAGGGATATCGGTTGGTGTCCCAATGATCACTTGGCCATTATTTTCTGAA
CAATTTTGTAATGAGAAGCTTATTGTGAATGTACTCAAGACAGGAGTGAAGGGTGGTATG
GAGAATCCAGTGATGTTTTTAGAGGATGAAAAAGGATGTGCACAAGTGAAGAAAGATGAT
ATTAAGATGGTTATTGAAAGATTAATGGGTGAAGAAGAGGAAGCAAAAATGAGAAGAGAA
AGAGCTAAAGGGCTTGCAGATATGGCAACAAAGGCTGTGGAGGAAGGAGGTTCATCTCAC
ATTAATTTGACAAAACTAATAGAAGATGTCACACAACAACCAAAAATTGGGGGTTTAAAG
TCTAGATAATGTTTCTTGATCAAGTATAAGAAAGGCAATATGTAGACAAATGTTGGAAAA
TCGATGTGAAATCTTATGCTGATTTACGTACGAATATTCAATTATGATTTACCGCTATAG
ATAAATTTGTAAGAGGTCAAGAACATACGATTTTGTTCAACTTGTTAAATCCAGTTACCA
GCTGAATTGAATATTATGATATAAGTAAATAAAGGAGAGAATCATATGAATCTTTAGACG
ATGCCATGAATGTTGTGTTCAAGGACGTTTGTCTTAGATAGTGTCTTTACAAATGAAAGG
AAATTAATAAAGTATTTATAGGTCACAAGAATGAGGCACCAACTAATCAAAAATAAGGTC
CACTTTGATACTTAAAATGCTAGCACCAATGTATGTTATGCTAATTAATATTCCAATGCA
ATTACTAAGATATGTTGGCTTGAATATTTAAACCTCTATCCCATATTTTTGAATATGCTT
CTCTCATTACTTTGCTATTTAATCTAAAAAAAGAAATCCTACACCTATATTGTATACGTT
CTT