Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc12g042400.1.1
CDS Infomation	Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A199UJF3_ANACO)
Sequence	ATGGTGAGGCTTCCCTCCAAATTCAAACCTCCAAAACCCAAAACCCTAATCTCTCTTCTT ACATCTCAAACTCAAAAATCACTTCACCACACATTCTCTCCATCTCTTTTGCAAACCCAT AAACTCTTCAATCATTTCACCCAAATCCTCTCTCATGCCATTACTTCAGGCTACTTCACA AATCCATTCATTTCCAGCCAACTCCTCCAACATTGTCTAACAAATTCTGATTTCACTCTC ACTTTTTCTCACACCCTTTTCACTCAAATCCCTAACCACAATGTCTTCTCTTGGAATTTC CTCATCCGTGCATACTGCCACAGTTCATTTCCCCAAGAAGCCGTTAGTCTTTACAATCAA ATGATGCGGGAAAGTTTGAGTCTTGATAATTTTACTTTCCCTTTTGTACTGAAAGCTTGT GGTAGATTAGTTAGTTTTCATAAGGGTCGAGAAGTTCATTGTGTGAGTTTGAAAATGGGG TTTGAATTTGATGTTTTTGTGCAAAATTCTTTGATTTATATGTATTTTCAATGTGGGGTT GTTGAGTTTGCACAGAAGGTGTTTGATTTTATTCCTGATTCAGTTCGTGATGTTGTTACT TGGAATAGTATGATTTCTGGGTATTTACAAGGTGGGTGTTGTTATCAAGCAGTGAAGGTG TTTGGAAAATTGTTGCGCGAAAGTGATGTGAGGTTGAATGATGTAAGTATTGTGAGTGCT CTTACAGCTTGTGCAAGAACTGAGTTGCTTGACGTGGGGAAGAGGATTCACGGGTTGATT GTGGTCTATGGAGTTGTAATGGATGTCTTCTTAGGTTCTTCTTTGGTTGATATGTACACG AAATGTGGGTGTTTAGAAGATGCTAAAACTGTTTTTGACCAATTGATAGATAAAAATATA GTTTGTTGGACTTCTATGATTGCAGGTTATTTGAAATGTGATATGTGTAAGGAAGCGATA GAGTTATTCAGGGAGATGCTCATAGCTGGGGTTATGGCCGAACCTGCCACAATTGCTTGT GTTGTTTCTGCATGTGGACATTCAGGTGCACTGGATCTCGGAAGGTGGGTGCATAATTAT AGCGAAAGGAGTGGAATAGAAATGAACCTTATAGTGAAGAATTCTTTGATTGATATGTAC TCTAAATGTGGACTTGTTGATAAAGCTCTCGAAGTTTTTCATTCGTTAACTAATAAGGAT GTTTATTCGTGGAGTATGATGATTTCTGGGCTAGCTATGAATGCAAGGTCCAAAGAGGCT TTGCAGTTATTTTCACTTATGGAAGGATCAAGTGAAGTAAGTCCAAATGAAGTAACGTTT CTTGGAATCTTATCTGCCTGTAGTCATGGTGGATTTGTTGATGAAGGGTTTTACTTTTTT GAGAAAATGACAACGAGATACAAAATTTTCCCAGGGATTGAGCACTACGGTTGCCTGGTT GATCTTTTGGGTCGTGCAAATCTTCTGGTTGAGGCTATGGATTTGATAGGTTCCATGTCC ATTCAGCGGGATGCTGTCATTTGGCGATCTCTGCTTTTTGCTTGTAGCAGACACGGTAAT GTAGAGTTGGCCGAGGTTGCTGCCAAAAAGATTAATGAATTGGAACCAGAGAAGTGTGGG GCACATGTACTGTTGTCTAATGCCTATGCCTCTGCATCTAGGTGGAAAGATGTGAAGATG GTAAGGAGGAATATGGGTGCTGAGGGAATCCAAAAGCAACCTGGATGCTCTTTTATTGAA ATAGATGGTTTTGTTCATGAATTTCTTGTTGCTGATAGAGCGCACTGTCAGATTGACATC ATATGTGATACACTTCTGGCAATGAATGTCGTTCTAAAATCAAGAGCACCTGAGCTTGTT TTCCTGGATTTCTTTCATTGA

Peptide Sequence

PEP ID	Solyc12g042400.1.1
PEP Infomation	Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A199UJF3_ANACO)
Sequence	MVRLPSKFKPPKPKTLISLLTSQTQKSLHHTFSPSLLQTHKLFNHFTQILSHAITSGYFT NPFISSQLLQHCLTNSDFTLTFSHTLFTQIPNHNVFSWNFLIRAYCHSSFPQEAVSLYNQ MMRESLSLDNFTFPFVLKACGRLVSFHKGREVHCVSLKMGFEFDVFVQNSLIYMYFQCGV VEFAQKVFDFIPDSVRDVVTWNSMISGYLQGGCCYQAVKVFGKLLRESDVRLNDVSIVSA LTACARTELLDVGKRIHGLIVVYGVVMDVFLGSSLVDMYTKCGCLEDAKTVFDQLIDKNI VCWTSMIAGYLKCDMCKEAIELFREMLIAGVMAEPATIACVVSACGHSGALDLGRWVHNY SERSGIEMNLIVKNSLIDMYSKCGLVDKALEVFHSLTNKDVYSWSMMISGLAMNARSKEA LQLFSLMEGSSEVSPNEVTFLGILSACSHGGFVDEGFYFFEKMTTRYKIFPGIEHYGCLV DLLGRANLLVEAMDLIGSMSIQRDAVIWRSLLFACSRHGNVELAEVAAKKINELEPEKCG AHVLLSNAYASASRWKDVKMVRRNMGAEGIQKQPGCSFIEIDGFVHEFLVADRAHCQIDI ICDTLLAMNVVLKSRAPELVFLDFFH*

Transcript Sequence

Transcript ID	Solyc12g042400.1.1
Transcript Infomation	Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A199UJF3_ANACO)
Sequence	ATGGTGAGGCTTCCCTCCAAATTCAAACCTCCAAAACCCAAAACCCTAATCTCTCTTCTT ACATCTCAAACTCAAAAATCACTTCACCACACATTCTCTCCATCTCTTTTGCAAACCCAT AAACTCTTCAATCATTTCACCCAAATCCTCTCTCATGCCATTACTTCAGGCTACTTCACA AATCCATTCATTTCCAGCCAACTCCTCCAACATTGTCTAACAAATTCTGATTTCACTCTC ACTTTTTCTCACACCCTTTTCACTCAAATCCCTAACCACAATGTCTTCTCTTGGAATTTC CTCATCCGTGCATACTGCCACAGTTCATTTCCCCAAGAAGCCGTTAGTCTTTACAATCAA ATGATGCGGGAAAGTTTGAGTCTTGATAATTTTACTTTCCCTTTTGTACTGAAAGCTTGT GGTAGATTAGTTAGTTTTCATAAGGGTCGAGAAGTTCATTGTGTGAGTTTGAAAATGGGG TTTGAATTTGATGTTTTTGTGCAAAATTCTTTGATTTATATGTATTTTCAATGTGGGGTT GTTGAGTTTGCACAGAAGGTGTTTGATTTTATTCCTGATTCAGTTCGTGATGTTGTTACT TGGAATAGTATGATTTCTGGGTATTTACAAGGTGGGTGTTGTTATCAAGCAGTGAAGGTG TTTGGAAAATTGTTGCGCGAAAGTGATGTGAGGTTGAATGATGTAAGTATTGTGAGTGCT CTTACAGCTTGTGCAAGAACTGAGTTGCTTGACGTGGGGAAGAGGATTCACGGGTTGATT GTGGTCTATGGAGTTGTAATGGATGTCTTCTTAGGTTCTTCTTTGGTTGATATGTACACG AAATGTGGGTGTTTAGAAGATGCTAAAACTGTTTTTGACCAATTGATAGATAAAAATATA GTTTGTTGGACTTCTATGATTGCAGGTTATTTGAAATGTGATATGTGTAAGGAAGCGATA GAGTTATTCAGGGAGATGCTCATAGCTGGGGTTATGGCCGAACCTGCCACAATTGCTTGT GTTGTTTCTGCATGTGGACATTCAGGTGCACTGGATCTCGGAAGGTGGGTGCATAATTAT AGCGAAAGGAGTGGAATAGAAATGAACCTTATAGTGAAGAATTCTTTGATTGATATGTAC TCTAAATGTGGACTTGTTGATAAAGCTCTCGAAGTTTTTCATTCGTTAACTAATAAGGAT GTTTATTCGTGGAGTATGATGATTTCTGGGCTAGCTATGAATGCAAGGTCCAAAGAGGCT TTGCAGTTATTTTCACTTATGGAAGGATCAAGTGAAGTAAGTCCAAATGAAGTAACGTTT CTTGGAATCTTATCTGCCTGTAGTCATGGTGGATTTGTTGATGAAGGGTTTTACTTTTTT GAGAAAATGACAACGAGATACAAAATTTTCCCAGGGATTGAGCACTACGGTTGCCTGGTT GATCTTTTGGGTCGTGCAAATCTTCTGGTTGAGGCTATGGATTTGATAGGTTCCATGTCC ATTCAGCGGGATGCTGTCATTTGGCGATCTCTGCTTTTTGCTTGTAGCAGACACGGTAAT GTAGAGTTGGCCGAGGTTGCTGCCAAAAAGATTAATGAATTGGAACCAGAGAAGTGTGGG GCACATGTACTGTTGTCTAATGCCTATGCCTCTGCATCTAGGTGGAAAGATGTGAAGATG GTAAGGAGGAATATGGGTGCTGAGGGAATCCAAAAGCAACCTGGATGCTCTTTTATTGAA ATAGATGGTTTTGTTCATGAATTTCTTGTTGCTGATAGAGCGCACTGTCAGATTGACATC ATATGTGATACACTTCTGGCAATGAATGTCGTTCTAAAATCAAGAGCACCTGAGCTTGTT TTCCTGGATTTCTTTCATTGA