Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g040680.2.1
CDS Infomation

mitogen-activated protein kinase 16
Sequence

ATGGGGGGTAGTAGTACATTTGTTGATGGAGTTCTTCGATGGTTTCATCATCGTCGTCAC
ACTAATGAAGATGCAATCTTGACTCAAACCCACAATTCTACAGATACCCATTTACAAGAA
AAACAACACGAATTTACTATTACTGAAGACTTTGACTTCACCGGTTTAAAGCTCATCAAA
GTACCCAAGCGTTTTCATTTGCCTATTTCTTCTTCTTCTTCTTCCATGGATCCTACCAAA
AAGAATGCGTTAGAGACGGAATTCTTTACTGAATATGGAGAGGCAAGTAGATACCAAGTT
CAGGAAGTAATTGGCAAAGGAAGCTATGGAGTTGTGGGTTCTGCTGTTGATACACATACT
GGTGAAAGAGTTGCAATCAAGAAAATTAATGATGTCTTTGACCATGTTTCTGATGCGACA
AGAATCTTGAGAGAAATTAAGCTTCTTCGGCTACTTAGGCATCCAGATATCGTAGAAATA
AAGCACATTATGTTGCCTCCTTCTCGAAGAGAGTTTAAAGATATTTATGTTGTTTTTGAA
TTGATGGAATCTGATCTCCATCAAGTAATTAAGGCCAATAATGATCTTACACATGAGCAT
TATCAATTTTTCCTCTACCAGCTTCTGCGTGGACTAAAATATATTCATACAGCAAATATC
TTCCACAGGGATTTAAAGCCGAAAAATATCCTTGCTAATGCTGACTGTAAGTTGAAGATA
TGTGATTTTGGGCTTGCTCGTGTATCATTCAATGATGTGCCATCAGCTATTTTCTGGACC
GATTATGTTGCAACTCGATGGTATCGTGCTCCTGAGCTATGTGGATCCTTCTTTTCTAAG
TATACTCCTGCTATTGATATATGGAGCATCGGATGCATATTTGCAGAGTTGCTTTCTGGA
AAACCATTATTTCCTGGAAAGAATGTGGTGCATCAATTGGACCTAATCACAGATTTGCTT
GGGACACCTCCTCCAGAAACAGTTGCAAAGATAAGAAATGAAAAAGCTAGAAGATACCTC
AGTAGCATGCGGAAGAAACAACCGGTTGGGTTTGCAAAAAAGTTTCCAAATGCAGATCCT
TTGGCATTACGCCTACTTGAACGACTGCTTGCATTTGACCCTAAAGATCGGCCATCTGCA
GAAGAGGGATTAGAGGATCCTTATTTCCATGGTTTATCAAATGCTGATCGTGAACCATGT
AGACCACCAATATCGAAGCTTGAGTTTGAATTTGAGAAGAGGAAACTGGCAAAAGATGAT
GTTAGAGAACTCATATATCGCGAGATTTTAGAATATCATCCGCAGATGCTTCAGGAGTAT
CTTTCTGGTGCAGATCAGACTAGTGGCTTTATGTACCCAAGTGGTGTTGATCGATTCAAG
CGACAATTTGCACATCTTGAGGAGCATGCTGGTAAAGGTGAACATAGTGCTCCGATTCTG
AGGCAGCATGCTTCCTTGCCTAGAGAGCGAGTACCTGCACCAAAAGATGACACCTCTTCC
CAAAATAATGATTGTGAAAAGAGAACTGTTTCAACAACTCTACAGAGTCCACCAACGCAA
TCTGAGGGATCAGAGAACTACAGTGCTCGTAGCTTGCTGAAGAGTGCTAGCATCAGTGGT
TCCAAGTGTGTGGAAGTAAAAAGAAAAAACGCAGAGGAAGAGCCAATCGAAGAACAAAAT
GAAGAAGTTGATGGTTTGTCTCAAGAAGTTGCTTCTCTTCATGTTTAA

Peptide Sequence

PEP ID

Solyc12g040680.2.1
PEP Infomation

mitogen-activated protein kinase 16
Sequence

MGGSSTFVDGVLRWFHHRRHTNEDAILTQTHNSTDTHLQEKQHEFTITEDFDFTGLKLIK
VPKRFHLPISSSSSSMDPTKKNALETEFFTEYGEASRYQVQEVIGKGSYGVVGSAVDTHT
GERVAIKKINDVFDHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFE
LMESDLHQVIKANNDLTHEHYQFFLYQLLRGLKYIHTANIFHRDLKPKNILANADCKLKI
CDFGLARVSFNDVPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLSG
KPLFPGKNVVHQLDLITDLLGTPPPETVAKIRNEKARRYLSSMRKKQPVGFAKKFPNADP
LALRLLERLLAFDPKDRPSAEEGLEDPYFHGLSNADREPCRPPISKLEFEFEKRKLAKDD
VRELIYREILEYHPQMLQEYLSGADQTSGFMYPSGVDRFKRQFAHLEEHAGKGEHSAPIL
RQHASLPRERVPAPKDDTSSQNNDCEKRTVSTTLQSPPTQSEGSENYSARSLLKSASISG
SKCVEVKRKNAEEEPIEEQNEEVDGLSQEVASLHV*

Transcript Sequence

Transcript ID

Solyc12g040680.2.1
Transcript Infomation

mitogen-activated protein kinase 16
Sequence

GATCGTTAATAAAGTTATCAATTTTATTGACATGTCCCCCTCCTGACGTTCCCCTAGCGG
GGGAACTCTCAATAGCGATTGTTGCTCCTTATGCCTGGTTCCGATGACTCAAAAAATAAT
TAATTTTAAATTAACATGTGCTGCTATACACAAGTAATAACAGAAAACAATAATACCCAA
TTTGAAAGGTAGGAAACCAATATTTTTGACTTGATACCAAATTACATGTTATTTTAGTAG
GTTTCAAACATTTAAAAGGTAGGAAATCAAATTGCCCACTTGGCAGCCATAATTTGCCTA
ATATAATTTTCCAAAATTTCAAAGGTAGGAAGATGGAAGCATCTGCCAGTATAACACGAT
TGTCCTAACTCGTATACACTCTATTATTGCTACTTCCTTCCTTGCATCAATCTGTACCAA
TAAAAATAGGAGGGAGAATATTGGAGAAGAGAGAAAGCGTGGAATGCTGAGATCTTGTGG
TAGAATCAATACGAAAGTTTAGGGGAGAAGTTGGGTTGTGTATATGGGGGGTAGTAGTAC
ATTTGTTGATGGAGTTCTTCGATGGTTTCATCATCGTCGTCACACTAATGAAGATGCAAT
CTTGACTCAAACCCACAATTCTACAGATACCCATTTACAAGAAAAACAACACGAATTTAC
TATTACTGAAGACTTTGACTTCACCGGTTTAAAGCTCATCAAAGTACCCAAGCGTTTTCA
TTTGCCTATTTCTTCTTCTTCTTCTTCCATGGATCCTACCAAAAAGAATGCGTTAGAGAC
GGAATTCTTTACTGAATATGGAGAGGCAAGTAGATACCAAGTTCAGGAAGTAATTGGCAA
AGGAAGCTATGGAGTTGTGGGTTCTGCTGTTGATACACATACTGGTGAAAGAGTTGCAAT
CAAGAAAATTAATGATGTCTTTGACCATGTTTCTGATGCGACAAGAATCTTGAGAGAAAT
TAAGCTTCTTCGGCTACTTAGGCATCCAGATATCGTAGAAATAAAGCACATTATGTTGCC
TCCTTCTCGAAGAGAGTTTAAAGATATTTATGTTGTTTTTGAATTGATGGAATCTGATCT
CCATCAAGTAATTAAGGCCAATAATGATCTTACACATGAGCATTATCAATTTTTCCTCTA
CCAGCTTCTGCGTGGACTAAAATATATTCATACAGCAAATATCTTCCACAGGGATTTAAA
GCCGAAAAATATCCTTGCTAATGCTGACTGTAAGTTGAAGATATGTGATTTTGGGCTTGC
TCGTGTATCATTCAATGATGTGCCATCAGCTATTTTCTGGACCGATTATGTTGCAACTCG
ATGGTATCGTGCTCCTGAGCTATGTGGATCCTTCTTTTCTAAGTATACTCCTGCTATTGA
TATATGGAGCATCGGATGCATATTTGCAGAGTTGCTTTCTGGAAAACCATTATTTCCTGG
AAAGAATGTGGTGCATCAATTGGACCTAATCACAGATTTGCTTGGGACACCTCCTCCAGA
AACAGTTGCAAAGATAAGAAATGAAAAAGCTAGAAGATACCTCAGTAGCATGCGGAAGAA
ACAACCGGTTGGGTTTGCAAAAAAGTTTCCAAATGCAGATCCTTTGGCATTACGCCTACT
TGAACGACTGCTTGCATTTGACCCTAAAGATCGGCCATCTGCAGAAGAGGGATTAGAGGA
TCCTTATTTCCATGGTTTATCAAATGCTGATCGTGAACCATGTAGACCACCAATATCGAA
GCTTGAGTTTGAATTTGAGAAGAGGAAACTGGCAAAAGATGATGTTAGAGAACTCATATA
TCGCGAGATTTTAGAATATCATCCGCAGATGCTTCAGGAGTATCTTTCTGGTGCAGATCA
GACTAGTGGCTTTATGTACCCAAGTGGTGTTGATCGATTCAAGCGACAATTTGCACATCT
TGAGGAGCATGCTGGTAAAGGTGAACATAGTGCTCCGATTCTGAGGCAGCATGCTTCCTT
GCCTAGAGAGCGAGTACCTGCACCAAAAGATGACACCTCTTCCCAAAATAATGATTGTGA
AAAGAGAACTGTTTCAACAACTCTACAGAGTCCACCAACGCAATCTGAGGGATCAGAGAA
CTACAGTGCTCGTAGCTTGCTGAAGAGTGCTAGCATCAGTGGTTCCAAGTGTGTGGAAGT
AAAAAGAAAAAACGCAGAGGAAGAGCCAATCGAAGAACAAAATGAAGAAGTTGATGGTTT
GTCTCAAGAAGTTGCTTCTCTTCATGTTTAATTCTCTGCAGAAATCAACATTTTGAAGTT
TCAGTCCTTGATTTCAGCTAGAAGCTAACTGTAGGTTATCAGTTCCTATTGTGTTATAAA
ATATTACTTGCTATATATAGTAGGAAAACACTCCAGCTATTCAAATTTTCTCATTAGATT
ACAAGGTTTGAAATTTGTAACGATTTCATAAACACTACTTCCTCTACCCTAACTAACAGA
GTCTTTCTTAAATATCGTTCATTGTATGCCCGTGTACTTTACCTGCGTGTTGCGTGGATA
ATATTGAAGAGAACAACAGTATACATTCTGCTCGAATATGTCTTATTTATTTGAAAATTT
TTAATTTTATTTCAACCATATTCATAAGAGGGCTAACTTAGAAGAAAATGTTTTTCTTCT
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