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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g040390.2.1
CDS Infomation

RING/U-box superfamily protein (AHRD V3.3 *-* AT1G73760.1)
Sequence

ATGGCACAGTCCATACTCATGCCTGGAAGAAGCTTCACAATGTCCAGAAATCAAGCAAGA
AACAAAGAAACCAGAAGCAAAAATCAAAAGAACCCAGAAAAAAAAATCAAAAGAAACCCC
ATAAACTCCACCATTTCTTCTACCCATGAATGGCCAACAACACCCATCGCTAAAAAGAAG
AAGAATTTCACACCATTTAGGTGTGTGGGTTGCAGGGAAACTTCACAACTCTCTGTCCCT
GCACCAATTGCTGATAGCCAATCCAAGAAGAAGAAGAAGAAGCTGAGAACCAAAACCCTT
AATTTTTTTGATGGTGATTTTGATGATTTTGTTGTTTCAAGAAAACCCCATTCTTCTAAA
GGGAGAGTTGATGCTGACAAGATTACGCCCAAGGAGCAGTCTATGCAAAGAATGGTGACA
GGCTCAGAAGACTATCCTGTTCTTGATACTGCAACTCTGGAAAGGCCACACTCGCGAGCA
GATTGGTTTGGATTTGGGCATCATTCTCATTTTGATTTTTCTGAAGGGCTTTCTGAGTTT
GTGATGCTTCAGAATAGTTTTATGGGAGGAAGAACAGATTGTCCTGATCGATACCGAAGC
TTGAGGCTTAATGTGGATAACATGTCATATGAGGCAAGTCATTTCCTTGGATCTCTCTGT
CCTTGTAACTCTATCTGTGTGTTAACGATAAGTTCCCTTTGCTTACAGGAATTGGTGGAA
CTCGGTGATAGAATTGGATATGTGAGTACAGGATTGAAAGAAAACGAGATAACTCAATGT
GTTAGGAGAACAAAGCCCGTCTCTTTGAATAATTTCTCTCATTTACACACAGTAGTGGAG
AAAAATTGTAGCATTTGTCAGGAAGAATATGAGGCTGATGATGAAATGGGCAAGCTGGGT
TGTGGACACTTTTATCATATCGACTGCATAAAACAGTGGCTTATGCACAAAAATAACTGT
CCCGTCTGTAAATCTGTTGCCATGTCAACCTGTTGA

Peptide Sequence

PEP ID

Solyc12g040390.2.1
PEP Infomation

RING/U-box superfamily protein (AHRD V3.3 *-* AT1G73760.1)
Sequence

MAQSILMPGRSFTMSRNQARNKETRSKNQKNPEKKIKRNPINSTISSTHEWPTTPIAKKK
KNFTPFRCVGCRETSQLSVPAPIADSQSKKKKKKLRTKTLNFFDGDFDDFVVSRKPHSSK
GRVDADKITPKEQSMQRMVTGSEDYPVLDTATLERPHSRADWFGFGHHSHFDFSEGLSEF
VMLQNSFMGGRTDCPDRYRSLRLNVDNMSYEASHFLGSLCPCNSICVLTISSLCLQELVE
LGDRIGYVSTGLKENEITQCVRRTKPVSLNNFSHLHTVVEKNCSICQEEYEADDEMGKLG
CGHFYHIDCIKQWLMHKNNCPVCKSVAMSTC*

Transcript Sequence

Transcript ID

Solyc12g040390.2.1
Transcript Infomation

RING/U-box superfamily protein (AHRD V3.3 *-* AT1G73760.1)
Sequence

GTATATGGATATATTACTCGACGTTTTATTTAATTCTAGAACTTCCTCGGTTGCTTGTAT
AAATAGATAGATTGTATTGTTTTATTGTTTTGATTCTCTCATAAGCATTTCTTCTTCTTC
TTTCCTTTTGTGTTAACACACATTTTTCTTTCTTTCGCTCGTCAATAACATGGCACAGTC
CATACTCATGCCTGGAAGAAGCTTCACAATGTCCAGAAATCAAGCAAGAAACAAAGAAAC
CAGAAGCAAAAATCAAAAGAACCCAGAAAAAAAAATCAAAAGAAACCCCATAAACTCCAC
CATTTCTTCTACCCATGAATGGCCAACAACACCCATCGCTAAAAAGAAGAAGAATTTCAC
ACCATTTAGGTGTGTGGGTTGCAGGGAAACTTCACAACTCTCTGTCCCTGCACCAATTGC
TGATAGCCAATCCAAGAAGAAGAAGAAGAAGCTGAGAACCAAAACCCTTAATTTTTTTGA
TGGTGATTTTGATGATTTTGTTGTTTCAAGAAAACCCCATTCTTCTAAAGGGAGAGTTGA
TGCTGACAAGATTACGCCCAAGGAGCAGTCTATGCAAAGAATGGTGACAGGCTCAGAAGA
CTATCCTGTTCTTGATACTGCAACTCTGGAAAGGCCACACTCGCGAGCAGATTGGTTTGG
ATTTGGGCATCATTCTCATTTTGATTTTTCTGAAGGGCTTTCTGAGTTTGTGATGCTTCA
GAATAGTTTTATGGGAGGAAGAACAGATTGTCCTGATCGATACCGAAGCTTGAGGCTTAA
TGTGGATAACATGTCATATGAGGCAAGTCATTTCCTTGGATCTCTCTGTCCTTGTAACTC
TATCTGTGTGTTAACGATAAGTTCCCTTTGCTTACAGGAATTGGTGGAACTCGGTGATAG
AATTGGATATGTGAGTACAGGATTGAAAGAAAACGAGATAACTCAATGTGTTAGGAGAAC
AAAGCCCGTCTCTTTGAATAATTTCTCTCATTTACACACAGTAGTGGAGAAAAATTGTAG
CATTTGTCAGGAAGAATATGAGGCTGATGATGAAATGGGCAAGCTGGGTTGTGGACACTT
TTATCATATCGACTGCATAAAACAGTGGCTTATGCACAAAAATAACTGTCCCGTCTGTAA
ATCTGTTGCCATGTCAACCTGTTGATTTTCGTATTCCTTTTGTATATAGCCTTTGTGCAT
CCTGAAACTGATGGCTCTTTTGTTCGGACAGCAGTTCAATATGAGACTTGCTGAAACAAG
GTGGTTCACAATCTTCAATTGTACATAACTCTATCAGATAATGAACTTTTAAGCGTGATG
TTGATTT