Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g038970.2.1
CDS Infomation

EMB1873 protein (AHRD V3.3 *** A0A097PRP8_SOLLC)
Sequence

ATGGATCTGAAAGGTACGCCGGTTGAAAATGGATACCGTATGCCTGCAGAATGGGAACCC
CACTCTGGTTGTTGGATGGGTTGGCCGGAACGTCCAGATAACTGGAGAAATAATGCAGTC
CACGGTCAGCGTGCATTTGCAACTGTAGCATCTGCTATTTCAAGATTTGAATCAGTAACA
GTCTGCGCTAGTGCTGCTCAGTGGGAAAATGCACGCAGCTTGTTGCCTAAGCATATCAGG
GTTGTGGAAATGAGCATCAATGATTCTTGGTTTCGTGACACTGGTCCAACTTTCGTCATC
AGAAATACCACAGCAAATGCAGAAAATGCAGTGTCAAGTGTTGCAGGGGTTGATTGGAAC
TTCAATAGCTGGGGTGATGTCAAGATGGTTATTAAGGAAGAAATGCAGTTTATTCTGGAG
GATATTGGTTCTGTAGTCAAAGAGGAGGGTAAGCATAATGACTTTAAAACGAATAACACT
AACAGTCTCAAATCTGCAATTTACGGAACTAAAGGTGTTGTTGAGGGCTGTTACAAAGAC
TGGAATCTTGACCTTCTTGTTGCAAGAAAGATTTTGGCAATTGAGAAGCTCCCAAAGTTT
CCACATTCTATGGTTCTTGAAGGTGGAAGCATTCATGTTGATGGAGAAGGGACTTGTCTC
ACAACCGAAGAGTGCCTCCTGAACAAAAACAGGAATCCCCATTTGTCTAAAGAACAGATT
GAGAATGAACTAAAAGCATATCTCGGAGTCAGGAAGATTATTTGGCTGCCTCGAGGGTTG
CTTGGTGATGAGGATACAAATGGTCATATCGACAACATGTGCTGTTTTGTGAAACCTGGT
GTCGTTTTGTTGTCTTGGACTGATGATGTATCTGATGAACAGTATGAAAGATCCTTTGAA
GCACTCTCTATTCTTGAAAATACTTCTGATGCCAGTGGTAGAAAAATAGAAGTGATCAAA
CTCCATGTACCTGGGCCACTCTATATGACAGATGAGGAAGCAGCTGGAATAGTTCAGGAT
GGCGAAGCTAAACCTAGGCCTTCAGGTACAAGGCTTGCTGCTTCTTATGTAAACTTCTAC
ATTGCTAATGGTGCAATTATTACTCCGCAATTTGGGGATAAAAAATGGGATGAAGAAGCT
ATTAGAGTCCTCTCACTGGCATTTCCAAATCATGAGGTTGTAGGAATTGAAGGTGCTAGG
GAAATTGTACTAGCAGGTGGAAATATACATTGTATCACACAACAGCAGCCAACCGGCCCA
GAATAA

Peptide Sequence

PEP ID

Solyc12g038970.2.1
PEP Infomation

EMB1873 protein (AHRD V3.3 *** A0A097PRP8_SOLLC)
Sequence

MDLKGTPVENGYRMPAEWEPHSGCWMGWPERPDNWRNNAVHGQRAFATVASAISRFESVT
VCASAAQWENARSLLPKHIRVVEMSINDSWFRDTGPTFVIRNTTANAENAVSSVAGVDWN
FNSWGDVKMVIKEEMQFILEDIGSVVKEEGKHNDFKTNNTNSLKSAIYGTKGVVEGCYKD
WNLDLLVARKILAIEKLPKFPHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLSKEQI
ENELKAYLGVRKIIWLPRGLLGDEDTNGHIDNMCCFVKPGVVLLSWTDDVSDEQYERSFE
ALSILENTSDASGRKIEVIKLHVPGPLYMTDEEAAGIVQDGEAKPRPSGTRLAASYVNFY
IANGAIITPQFGDKKWDEEAIRVLSLAFPNHEVVGIEGAREIVLAGGNIHCITQQQPTGP
E*

Transcript Sequence

Transcript ID

Solyc12g038970.2.1
Transcript Infomation

EMB1873 protein (AHRD V3.3 *** A0A097PRP8_SOLLC)
Sequence

GTATAATAATTATAATTTTAAAAAAATACAAATTACAAATGCGGCAGTGCTTTTTCTAAT
AAGACCACCTTTAAAACAGTGTACGGTCATGTTCGCTTGTGTTTGTTGTGGTGGTGCTGC
TGGCGAGAGAGAAGAAGAGGGTAGTGATGGATCTGAAAGGTACGCCGGTTGAAAATGGAT
ACCGTATGCCTGCAGAATGGGAACCCCACTCTGGTTGTTGGATGGGTTGGCCGGAACGTC
CAGATAACTGGAGAAATAATGCAGTCCACGGTCAGCGTGCATTTGCAACTGTAGCATCTG
CTATTTCAAGATTTGAATCAGTAACAGTCTGCGCTAGTGCTGCTCAGTGGGAAAATGCAC
GCAGCTTGTTGCCTAAGCATATCAGGGTTGTGGAAATGAGCATCAATGATTCTTGGTTTC
GTGACACTGGTCCAACTTTCGTCATCAGAAATACCACAGCAAATGCAGAAAATGCAGTGT
CAAGTGTTGCAGGGGTTGATTGGAACTTCAATAGCTGGGGTGATGTCAAGATGGTTATTA
AGGAAGAAATGCAGTTTATTCTGGAGGATATTGGTTCTGTAGTCAAAGAGGAGGGTAAGC
ATAATGACTTTAAAACGAATAACACTAACAGTCTCAAATCTGCAATTTACGGAACTAAAG
GTGTTGTTGAGGGCTGTTACAAAGACTGGAATCTTGACCTTCTTGTTGCAAGAAAGATTT
TGGCAATTGAGAAGCTCCCAAAGTTTCCACATTCTATGGTTCTTGAAGGTGGAAGCATTC
ATGTTGATGGAGAAGGGACTTGTCTCACAACCGAAGAGTGCCTCCTGAACAAAAACAGGA
ATCCCCATTTGTCTAAAGAACAGATTGAGAATGAACTAAAAGCATATCTCGGAGTCAGGA
AGATTATTTGGCTGCCTCGAGGGTTGCTTGGTGATGAGGATACAAATGGTCATATCGACA
ACATGTGCTGTTTTGTGAAACCTGGTGTCGTTTTGTTGTCTTGGACTGATGATGTATCTG
ATGAACAGTATGAAAGATCCTTTGAAGCACTCTCTATTCTTGAAAATACTTCTGATGCCA
GTGGTAGAAAAATAGAAGTGATCAAACTCCATGTACCTGGGCCACTCTATATGACAGATG
AGGAAGCAGCTGGAATAGTTCAGGATGGCGAAGCTAAACCTAGGCCTTCAGGTACAAGGC
TTGCTGCTTCTTATGTAAACTTCTACATTGCTAATGGTGCAATTATTACTCCGCAATTTG
GGGATAAAAAATGGGATGAAGAAGCTATTAGAGTCCTCTCACTGGCATTTCCAAATCATG
AGGTTGTAGGAATTGAAGGTGCTAGGGAAATTGTACTAGCAGGTGGAAATATACATTGTA
TCACACAACAGCAGCCAACCGGCCCAGAATAATTACCCAAGGTTAGAAATGGGATTCCAT
GTCTTAGCAGAGGGATAACAAGATTTGCATGTACAAGTGATAACATGGAATTCTTCATGA
TCACACGTGCAAAACTTTAGTTTCTGTATTTGCTTCTTCGTTCGAAATTCTGGAGTGCCA
AAATAATGTCTGGGTCCAGGTCAAAGTAAGATTTTTTGGTTAAAGCTTTAGATTTCAATA
GTATTACGTTTGATCAAACTTGTATTCAGGCTTCTATCTACGCTCCCTGGTTCATTTTTA
CACCATGAAATGAACGAGTTGCATGTGCAAATGTTTCTTAACAACCGTTACTGTCAGCAA
AACAGCCTTAGTTTCTCTTCTAGGCTCTATTGGGTTACATCATTTCAATTCAAGGTTGCT
TGCGGCATTGCAAAAAATGTTTCATACAATTTGACTAAAAAATACGTACTAATAGGTTCT
TTCAAAAAAAATGCAATATTCATTTTGAAAGGACTAATTTTTATAGTATTATAATCTCAA
TCAAGAAACTTGATAAACTTGTTTGGATTGATTTTTGTGAATAGCACTTCTTGATAATGC
TAAACTTCGAATCGTTTTTGTACATTATTAATATCA