Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g038340.2.1
CDS Infomation

Translation initiation factor eIF-2B subunit delta (AHRD V3.3 *** W9S6A9_9ROSA)
Sequence

ATGGATACTCGTCGACCTTCTCGCCTTATCGATCCAAAGGTTCGTCGGGTGGGATTCTTC
GCACCCGACCCGGATAACCATCCCAGACTTGCCTCATCTCCCTCCGGGTACTCTTCATCT
CCGGCGATGATCTCTCATGCCTTCGACAGCGTCTCACAAGCTGTGCCTGTTCCCAATTCT
ACCTTGTCGCGGCCTCGACGAACTTCTTTTGACGAAAGTGAGCAATTTGTGGTTGGAAGT
TACAATCCTATGCAGTCCGTGCTGGGAACTTCACCGGCATCCAGCGGAATTGGTGTAGAT
GGCGAATTTTCCGAGGACTCCTCTCAGTGGGTTCGTTTAACCGATGGTTTCGGTTTGACT
TCACCTGCGAAATCAATGACTGAGTTGAAAGACGATCAGGATACCTCTAGCATGGAACGG
GTCAGTGCACTAGTGGCTGAAACACCAACTGAAGTAGAAAGAAATGATAAGTCACTGAAA
GAAAAGACCACGAAAGCTGAAAGGCGTGCGCTGCAGGAGACTCAACGAGCTGCAAAAGCT
TCGGGAAAAGCTGGGGGAAAATCTGTGGTAAAGTTACATGGACAGTCTGGTAAACCTGCT
AAGCAGCCTCCACAAAAGAAAGATGGTGGACCAATGATGTCATCTGCAGCTCTTTCTGAG
ACAAAAGGAGGTGACGGACCACCAGAAAAGGATCGCAAGAAAGATGTACCAGCTCCTAGG
ATGCAATTTGATGATAAGAATCGTGTTGAAAAAGCTAAGAAGCGTGCACTAGTTAAAAAG
ATTGAAGCTAGAAATAGAGTAGAATTGTTTCGGCATTTACCGCAGTATGAACAAGGAACT
CAGCTACCTGATCTTGAATCGAGGTTTTTCCACCTTGATACCATGCATCCTGCAGTATAC
AAGGTCGGATTGCAGTATTTGGCTGGAGATGTAGTTGGGGCCAATGCTCGCTGTGTTGCA
ATGCTACAAGCATTTCAACAAGCCATCAAAGATTACTCTACACCTCGGGAAAAAGCTCTA
GGTAGAGATTTAACAGCAAGAATCAGTGGCTACGTATCATTTCTTAATGAGTGTAGGCCT
CTTTCTATTAGCATGGGGAATGCAATTCGCTTTCTTAAAGCTCGTATAGCCAAGTTATCT
TTAACTCTTTCTGAGTCAGAAGCAAAAGCTGCTCTGTATTCAGATATTGAGCGCTTCATG
AATGAGAAGATAGCATTAGCTGGCAGAGTAATAACAAGACAGGCAGTTATGAAGATCAGA
GATGGTGACGTTCTTCTCACGTATGGCTCTTCCTCTGTTGTTGAGATGATTCTGCTACAT
GCTTATGAGCTCGGGAAACAATTCCGTGTAATAGTGGTTGATTCTCGCCCTAAATTTGAA
GGCCGGGCACTACTTCGGAGGTTGGTAAGGAAGGGCCTAAGTTGTACATATACTCATCTA
AATGCTGTTTCGTACATTATGCATGAAGTCTCTAGAGTGTTAATGGGTGCTGAATCTGTA
TTATCTAATGGGACTGTGTACTCTATAATTGGGACTGCATGTGTTGCTATGGTTGCTCAT
GCATTCCGTGTTCCTCTGCTGATTTGTTGTGAAGCTTATAAGTTTCATGAGAGAGTACAA
CTTGATTCTGTTTCTTCCAATGAGCTGGGTAACCCAGATGTCATTTCCAAGATTCCTGGT
AGACTGGATGTCAATTACTTGGATAACTGGAGAAGTAATGATAATATTCAGCTTCTGAAT
TTGATGTATGACGCTACTCCGTCAGACTATATCTCAATGATCATTACAGATTATGGCATG
ATACCAACCACAAGTGTGCCTGTGATTGTGCACGAGTATGGGAGCGAACACCTCCTGATA
TAA

Peptide Sequence

PEP ID

Solyc12g038340.2.1
PEP Infomation

Translation initiation factor eIF-2B subunit delta (AHRD V3.3 *** W9S6A9_9ROSA)
Sequence

MDTRRPSRLIDPKVRRVGFFAPDPDNHPRLASSPSGYSSSPAMISHAFDSVSQAVPVPNS
TLSRPRRTSFDESEQFVVGSYNPMQSVLGTSPASSGIGVDGEFSEDSSQWVRLTDGFGLT
SPAKSMTELKDDQDTSSMERVSALVAETPTEVERNDKSLKEKTTKAERRALQETQRAAKA
SGKAGGKSVVKLHGQSGKPAKQPPQKKDGGPMMSSAALSETKGGDGPPEKDRKKDVPAPR
MQFDDKNRVEKAKKRALVKKIEARNRVELFRHLPQYEQGTQLPDLESRFFHLDTMHPAVY
KVGLQYLAGDVVGANARCVAMLQAFQQAIKDYSTPREKALGRDLTARISGYVSFLNECRP
LSISMGNAIRFLKARIAKLSLTLSESEAKAALYSDIERFMNEKIALAGRVITRQAVMKIR
DGDVLLTYGSSSVVEMILLHAYELGKQFRVIVVDSRPKFEGRALLRRLVRKGLSCTYTHL
NAVSYIMHEVSRVLMGAESVLSNGTVYSIIGTACVAMVAHAFRVPLLICCEAYKFHERVQ
LDSVSSNELGNPDVISKIPGRLDVNYLDNWRSNDNIQLLNLMYDATPSDYISMIITDYGM
IPTTSVPVIVHEYGSEHLLI*

Transcript Sequence

Transcript ID

Solyc12g038340.2.1
Transcript Infomation

Translation initiation factor eIF-2B subunit delta (AHRD V3.3 *** W9S6A9_9ROSA)
Sequence

GTTTTAAAAATATTATCTTAACTCACAATTGACTTAATTAAATTCTTAATTGACATTTGA
CCCTTACCTGGTTAAAGACGTTCTCAATATTAATTTTGAGACCCAAAAAAAAAAAAAGAA
CACCCCAATTCAATTTTCTTTGTTTGATTTGCTTTACAAACTTTATTTAAATTATCTTTT
AAATCGAAACGCCATAAAAATACAAGTTTCTGGCAAGCGTTTATCTTAGCAGTTAGCCAA
GTGATGAGCATTTGATTACCTGCAAATGTTTAATCAACTGCTCATTTTTCTCCCATTTAA
ACCCTAACCTTTGCTTCTATCATCTATCCATGGATACTCGTCGACCTTCTCGCCTTATCG
ATCCAAAGGTTCGTCGGGTGGGATTCTTCGCACCCGACCCGGATAACCATCCCAGACTTG
CCTCATCTCCCTCCGGGTACTCTTCATCTCCGGCGATGATCTCTCATGCCTTCGACAGCG
TCTCACAAGCTGTGCCTGTTCCCAATTCTACCTTGTCGCGGCCTCGACGAACTTCTTTTG
ACGAAAGTGAGCAATTTGTGGTTGGAAGTTACAATCCTATGCAGTCCGTGCTGGGAACTT
CACCGGCATCCAGCGGAATTGGTGTAGATGGCGAATTTTCCGAGGACTCCTCTCAGTGGG
TTCGTTTAACCGATGGTTTCGGTTTGACTTCACCTGCGAAATCAATGACTGAGTTGAAAG
ACGATCAGGATACCTCTAGCATGGAACGGGTCAGTGCACTAGTGGCTGAAACACCAACTG
AAGTAGAAAGAAATGATAAGTCACTGAAAGAAAAGACCACGAAAGCTGAAAGGCGTGCGC
TGCAGGAGACTCAACGAGCTGCAAAAGCTTCGGGAAAAGCTGGGGGAAAATCTGTGGTAA
AGTTACATGGACAGTCTGGTAAACCTGCTAAGCAGCCTCCACAAAAGAAAGATGGTGGAC
CAATGATGTCATCTGCAGCTCTTTCTGAGACAAAAGGAGGTGACGGACCACCAGAAAAGG
ATCGCAAGAAAGATGTACCAGCTCCTAGGATGCAATTTGATGATAAGAATCGTGTTGAAA
AAGCTAAGAAGCGTGCACTAGTTAAAAAGATTGAAGCTAGAAATAGAGTAGAATTGTTTC
GGCATTTACCGCAGTATGAACAAGGAACTCAGCTACCTGATCTTGAATCGAGGTTTTTCC
ACCTTGATACCATGCATCCTGCAGTATACAAGGTCGGATTGCAGTATTTGGCTGGAGATG
TAGTTGGGGCCAATGCTCGCTGTGTTGCAATGCTACAAGCATTTCAACAAGCCATCAAAG
ATTACTCTACACCTCGGGAAAAAGCTCTAGGTAGAGATTTAACAGCAAGAATCAGTGGCT
ACGTATCATTTCTTAATGAGTGTAGGCCTCTTTCTATTAGCATGGGGAATGCAATTCGCT
TTCTTAAAGCTCGTATAGCCAAGTTATCTTTAACTCTTTCTGAGTCAGAAGCAAAAGCTG
CTCTGTATTCAGATATTGAGCGCTTCATGAATGAGAAGATAGCATTAGCTGGCAGAGTAA
TAACAAGACAGGCAGTTATGAAGATCAGAGATGGTGACGTTCTTCTCACGTATGGCTCTT
CCTCTGTTGTTGAGATGATTCTGCTACATGCTTATGAGCTCGGGAAACAATTCCGTGTAA
TAGTGGTTGATTCTCGCCCTAAATTTGAAGGCCGGGCACTACTTCGGAGGTTGGTAAGGA
AGGGCCTAAGTTGTACATATACTCATCTAAATGCTGTTTCGTACATTATGCATGAAGTCT
CTAGAGTGTTAATGGGTGCTGAATCTGTATTATCTAATGGGACTGTGTACTCTATAATTG
GGACTGCATGTGTTGCTATGGTTGCTCATGCATTCCGTGTTCCTCTGCTGATTTGTTGTG
AAGCTTATAAGTTTCATGAGAGAGTACAACTTGATTCTGTTTCTTCCAATGAGCTGGGTA
ACCCAGATGTCATTTCCAAGATTCCTGGTAGACTGGATGTCAATTACTTGGATAACTGGA
GAAGTAATGATAATATTCAGCTTCTGAATTTGATGTATGACGCTACTCCGTCAGACTATA
TCTCAATGATCATTACAGATTATGGCATGATACCAACCACAAGTGTGCCTGTGATTGTGC
ACGAGTATGGGAGCGAACACCTCCTGATATAAATTGTCCTGTTTGGATGTGACAAAGAAG
GAACAATTACCAACTTACTGGCAATTTTTGCTGTCAGATAACAACACCTTATAGGAAATG
AATGCTTGCATTTAAATTATTTACCATATTAAAGAAAAGAATGCATGCATTAAAATTGTC
TTGGAGATCATAGAAATTTGCATAGTTTTCAATAAGGTCTTTCTCTTTTTACTCTGTGTC
TAACGACAG