Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g036500.2.1
CDS Infomation

DUF1666 family protein (AHRD V3.3 *** G7KN40_MEDTR)
Sequence

ATGCAATGTTCAGAAGAAACTATAGCTAGTTTGTTCTACAATATCTCTAGCTCTTTTCTA
ATTTTACTACTCTTCACCTATTTCACTTCCAGTTTGCTTGCCAAATTCTTCTATTTCCTT
GGTGGAAATCCGTTTTTCTGGAGGAATCAAGATGCGTATGAATTTTCTGATGACGAAGAA
GTGGAGGAAGAGCATGAGTATTATCATAATAATAATTATGAGTTTGTGGAAGAAAATCAT
TTCATAGATAATGAATTTCTTGGTGTTGAGAAAGAGATAGAAGAAAGTTGTAGCAATACT
GACGATGATTATGAAGAGGAGTCGATTTATAGCTCAATAATGTATTCAGAATCTATTTAT
AGTGATGATAATGAAATGGAAGTTATAGAAATATTAGATGATCATTATGATTCTTATTCT
AATTCTGATCCTTCTGGTTATTCTGATTCTCAAATCAACGAAGTTGGGCCCACTTTACCT
CTTCCTAGGGACATGAATACAAATGTATTAACGAATACCATTGACAAGGACATAAATCAT
GGAAATTGCTACAGGGAATTGATTGAAGACAAAAAAGTGATAGAGATTAATTTGTGTACT
AGAGAGGAAAATATGTTTGTTAATGCATCATCATCAAAGTTAGAGAACAATAAGAAGATT
GTGCAATCAGTGCAAGATGAAGAAAAGGATGAGCATGAAATATTTGGGGATTCTTGTACT
AATGGCTCAACTTCTAAGAGCTCTACTGAATGGAGAAGTTCAATTAAAGATTCAACAACT
GATGATCCATTTTCTTCATCATCAAGAAGAAGTTGCCCTAAATGGGAGTCTTACACAATC
TTTCAAAAATATGATGAAGAGATGTTGTTTTTTGATAGAATTAGTGCACAAAAACTACAT
GAAACAGAAACATTAAGATCAATTCAAGCATGTCCAAGATCAATATCAGATAAGATTGTC
CATAAATTATTCGTAAATAAGAAGTCAAGGCAGCATCATAACCCTTATTATGAACTAGAG
GCTGCTTATGTAGCACAGGTATGTTTAGCATGGGAAGCTCTGAGTTGGAATTACAAGTAC
TTTCAACGACTACGAGCTTCCCATAATAATAATAATAATAAGGAATCAAAGGACGACCAA
GGTTGTCCTGCTTATGTAGCACAACATTTCCAACAGTTTCAAGTTCATTTACAAAGATAC
ATTGAGAATGAGCCATATGAAAATGGAAAGAGACCGGAAATTTATGCTAAAATGAGAAGT
TTAGCTCCTAAATTGCTTCAAGTCCCAGAATATCGAGATTCAGTGGAGGAGGATAAAGGG
GCGGATCAAGATTATTGCTCAAGAATATCTTCAGAATCATTTCATGAAATAATGAAAGAA
GCAATCAGAACGTTTATGAATTTCCTAAAGGCAGACAAGGAGAATCGTTACCAAATATTA
GTGGCAGCTTTCTTTAGAAGAAAAAGAAGAGGTTCACCTCATGCTACCATCTTCTTGCTA
AACAAACAAAACAAAAAGAAAAAATCAAAGGTGAAAGATTTACAAAGATCAGGAAAGTGC
TTGAGGAATAAAAGAAGGTTAAAAGAAGAAGAAGAGATGGAGATGTTGATGTCATTAATA
GACTTGAAATTAGTGTCAAGGGTATTGAGAATGAGGCAAGTAAATGAAGAACAATTGCAT
TGGTGTGAAGACAAGATGAGCAAAGTAAAAATAAGTGATGGCAAATTACAAAGAGATTCT
TCACCACTTTTCTTTCCAGCACAATAG

Peptide Sequence

PEP ID

Solyc12g036500.2.1
PEP Infomation

DUF1666 family protein (AHRD V3.3 *** G7KN40_MEDTR)
Sequence

MQCSEETIASLFYNISSSFLILLLFTYFTSSLLAKFFYFLGGNPFFWRNQDAYEFSDDEE
VEEEHEYYHNNNYEFVEENHFIDNEFLGVEKEIEESCSNTDDDYEEESIYSSIMYSESIY
SDDNEMEVIEILDDHYDSYSNSDPSGYSDSQINEVGPTLPLPRDMNTNVLTNTIDKDINH
GNCYRELIEDKKVIEINLCTREENMFVNASSSKLENNKKIVQSVQDEEKDEHEIFGDSCT
NGSTSKSSTEWRSSIKDSTTDDPFSSSSRRSCPKWESYTIFQKYDEEMLFFDRISAQKLH
ETETLRSIQACPRSISDKIVHKLFVNKKSRQHHNPYYELEAAYVAQVCLAWEALSWNYKY
FQRLRASHNNNNNKESKDDQGCPAYVAQHFQQFQVHLQRYIENEPYENGKRPEIYAKMRS
LAPKLLQVPEYRDSVEEDKGADQDYCSRISSESFHEIMKEAIRTFMNFLKADKENRYQIL
VAAFFRRKRRGSPHATIFLLNKQNKKKKSKVKDLQRSGKCLRNKRRLKEEEEMEMLMSLI
DLKLVSRVLRMRQVNEEQLHWCEDKMSKVKISDGKLQRDSSPLFFPAQ*

Transcript Sequence

Transcript ID

Solyc12g036500.2.1
Transcript Infomation

DUF1666 family protein (AHRD V3.3 *** G7KN40_MEDTR)
Sequence

CAAGATTAGATTTTTTTCGACTTTCACAAAAAATCAACCTCCTAAATTCGTTTTTTCCAA
ATTTTTGCTTTGTTTTTTTTTCTTCTTAAATTTATGGAAGTTGGATGCAATATTTGATAA
AAAGTGGTGTACATATTATCACCTAAATAAAGTTAATAGCGCGTATTAATATGACACCAA
AAAGATCAATCTCAAGCATAAGGATATTTAAGTAAACTCCATAATAATATAAAAGGCAAT
AGACCATCTTGTGACAAACAATATAAATTTTATAAAGCAATTAAAGTTGACACCTTTTTT
TCCTAGTGCTACTTTGCTTTGTGAAAAAATCGATAGAGACTCTAAAATCTTTGTAAGCCT
TCAACCTTATAGAAAAACAAAAAAGAAAAATGCAATGTTCAGAAGAAACTATAGCTAGTT
TGTTCTACAATATCTCTAGCTCTTTTCTAATTTTACTACTCTTCACCTATTTCACTTCCA
GTTTGCTTGCCAAATTCTTCTATTTCCTTGGTGGAAATCCGTTTTTCTGGAGGAATCAAG
ATGCGTATGAATTTTCTGATGACGAAGAAGTGGAGGAAGAGCATGAGTATTATCATAATA
ATAATTATGAGTTTGTGGAAGAAAATCATTTCATAGATAATGAATTTCTTGGTGTTGAGA
AAGAGATAGAAGAAAGTTGTAGCAATACTGACGATGATTATGAAGAGGAGTCGATTTATA
GCTCAATAATGTATTCAGAATCTATTTATAGTGATGATAATGAAATGGAAGTTATAGAAA
TATTAGATGATCATTATGATTCTTATTCTAATTCTGATCCTTCTGGTTATTCTGATTCTC
AAATCAACGAAGTTGGGCCCACTTTACCTCTTCCTAGGGACATGAATACAAATGTATTAA
CGAATACCATTGACAAGGACATAAATCATGGAAATTGCTACAGGGAATTGATTGAAGACA
AAAAAGTGATAGAGATTAATTTGTGTACTAGAGAGGAAAATATGTTTGTTAATGCATCAT
CATCAAAGTTAGAGAACAATAAGAAGATTGTGCAATCAGTGCAAGATGAAGAAAAGGATG
AGCATGAAATATTTGGGGATTCTTGTACTAATGGCTCAACTTCTAAGAGCTCTACTGAAT
GGAGAAGTTCAATTAAAGATTCAACAACTGATGATCCATTTTCTTCATCATCAAGAAGAA
GTTGCCCTAAATGGGAGTCTTACACAATCTTTCAAAAATATGATGAAGAGATGTTGTTTT
TTGATAGAATTAGTGCACAAAAACTACATGAAACAGAAACATTAAGATCAATTCAAGCAT
GTCCAAGATCAATATCAGATAAGATTGTCCATAAATTATTCGTAAATAAGAAGTCAAGGC
AGCATCATAACCCTTATTATGAACTAGAGGCTGCTTATGTAGCACAGGTATGTTTAGCAT
GGGAAGCTCTGAGTTGGAATTACAAGTACTTTCAACGACTACGAGCTTCCCATAATAATA
ATAATAATAAGGAATCAAAGGACGACCAAGGTTGTCCTGCTTATGTAGCACAACATTTCC
AACAGTTTCAAGTTCATTTACAAAGATACATTGAGAATGAGCCATATGAAAATGGAAAGA
GACCGGAAATTTATGCTAAAATGAGAAGTTTAGCTCCTAAATTGCTTCAAGTCCCAGAAT
ATCGAGATTCAGTGGAGGAGGATAAAGGGGCGGATCAAGATTATTGCTCAAGAATATCTT
CAGAATCATTTCATGAAATAATGAAAGAAGCAATCAGAACGTTTATGAATTTCCTAAAGG
CAGACAAGGAGAATCGTTACCAAATATTAGTGGCAGCTTTCTTTAGAAGAAAAAGAAGAG
GTTCACCTCATGCTACCATCTTCTTGCTAAACAAACAAAACAAAAAGAAAAAATCAAAGG
TGAAAGATTTACAAAGATCAGGAAAGTGCTTGAGGAATAAAAGAAGGTTAAAAGAAGAAG
AAGAGATGGAGATGTTGATGTCATTAATAGACTTGAAATTAGTGTCAAGGGTATTGAGAA
TGAGGCAAGTAAATGAAGAACAATTGCATTGGTGTGAAGACAAGATGAGCAAAGTAAAAA
TAAGTGATGGCAAATTACAAAGAGATTCTTCACCACTTTTCTTTCCAGCACAATAGTAGT
ACTCTATGAGGACCCCATTTAGCATTAAGTAAAGTGTTTCATTTTACTTTAATGACTAGA
TCATGAATCATGTGTCATGTAGATGAATATCCTCTTTTT