Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g036220.2.1
CDS Infomation

APOLLO (AHRD V3.3 *** U5U566_9BRAS)
Sequence

ATGCAGGCCGGCCCCTCTACTCCACAAGAAACGACGATGGGAAGTGGGGAAGATAGGTCG
GAGATAGTGTTTTTCGACGTGGAGACAACTATACCAACGCGAACTGGACAGAAATATGCA
CTCTTGGAATTTGGGGCAATTCTTGTTTGCCCAAGAAAACTTGTTGAACAACATAGTTAC
TCTACCCTTGTACGACCCTCTGACCTCTCTCTAATTTCTACCCTTTCTGTTCGCTGCAAT
GGAATTACCAGAGATGCTGTCACTTCTGCCCCTTCATTTGCTGATATCGCCGATAAAGTC
TTTGATGTTCTCCATGGGAGGATATGGGCGGGCCACAATATACTGAAATTTGATTGTCCA
AGGATTCGGGAGGCATTTGCTGGAATTAACAGGCCTGCACCAGAATCTAAGGGGACAATT
GATACACTTACTTTGTTGACTGAAAAATTTGGAAAGAGAGCTGGTAACATGAAGATGGCC
TCTCTTGCTACATATTTTGGCCTTGGAGAGCAAACACATAGTGTGAACTGCAAGGTTTGG
AATATTTTTCATTGTCTCAAGGTTGATGTTTTACTTTTCAGAAGTTTGGATGATGTCCGA
ATGAATTTCGAAGTACTAAAGCACTGTGCAACTGTCTTGTTTTTGGAATCTAGCCTGCCT
GACGTATTAACCAATAACAGTTGGGTGTCTCCTAATGCTGCCATAAGAAGTCGTGCTAAT
GGAAATACTAATTCGGAGGGGATGGGCTTGAGTATAGATACACCTTCATCAAGTGTCAAG
ACAGGACGTCCTATGAAATCTGTTGCAGAAGCTTACATAGAATCAGACAATCCAATACTT
CCGCTTGTGAGCAGAAATATGGAGGAGGTACCAGATCTTATTGAAACAAATTCCTCGAGG
CCTGACCCTTTTAACTTGGTCCAATTCAGTGCAGAAGTAAGGGAATCCATTCAATTAGAT
GCAATGGAAGAAGAACCTGCTTCATGTTCTCAAGATTTTTCTGCATCAATTGCAACAGAG
GGTTACATTGGCTTCACAGACTTCTTAGAACCAAATAAAATTTCAATTTCTTCTGTCTCC
TCAATTCTTTCCCCCATACATCGTGGAATGCCGAAGATACAAATCTTGCACAACAATACT
GAGTTGCAAGTTTGCTCTAAATTCCTGAAGGTGCGGTTCGGAATTAGCACAAAGTTTGTC
AATTATGCTGGTCGGCCACGGTTGAGTTTTGTGGTTGATACATCATCAGAGTTGTGCCAA
CTTTTGGATGCAATTGATAATCTCGCTCAGAAGTTGAACGAGGATTCAGGTAGCATGTCA
GAATGGAGGCCTTTAGTAAACAGAAAACCTGGCTTTATGAACTGCCCTACCGTTCGTTTA
AATTTACCAACTGTTATAGATGGTAATATCTCCCGCTGGGTAACAGAGATATACCAGAAA
GAGTCTTCTGCAACACAGAAGCTTATGTTCAGTAGGTTTGATGTGACAGAACTGGATTCC
CTGATTACTCCAGGGACTCTGTTAGATGCATACTTCTTGGTGGATTCATACGACTATCAA
CAGATTGCAGGCATCCGGCTGGTGGCTAAAAAATTGATTGTTCATTCCTCCCTTATAGAT
AAAGTGACTTGTCCATCAAAATAA

Peptide Sequence

PEP ID

Solyc12g036220.2.1
PEP Infomation

APOLLO (AHRD V3.3 *** U5U566_9BRAS)
Sequence

MQAGPSTPQETTMGSGEDRSEIVFFDVETTIPTRTGQKYALLEFGAILVCPRKLVEQHSY
STLVRPSDLSLISTLSVRCNGITRDAVTSAPSFADIADKVFDVLHGRIWAGHNILKFDCP
RIREAFAGINRPAPESKGTIDTLTLLTEKFGKRAGNMKMASLATYFGLGEQTHSVNCKVW
NIFHCLKVDVLLFRSLDDVRMNFEVLKHCATVLFLESSLPDVLTNNSWVSPNAAIRSRAN
GNTNSEGMGLSIDTPSSSVKTGRPMKSVAEAYIESDNPILPLVSRNMEEVPDLIETNSSR
PDPFNLVQFSAEVRESIQLDAMEEEPASCSQDFSASIATEGYIGFTDFLEPNKISISSVS
SILSPIHRGMPKIQILHNNTELQVCSKFLKVRFGISTKFVNYAGRPRLSFVVDTSSELCQ
LLDAIDNLAQKLNEDSGSMSEWRPLVNRKPGFMNCPTVRLNLPTVIDGNISRWVTEIYQK
ESSATQKLMFSRFDVTELDSLITPGTLLDAYFLVDSYDYQQIAGIRLVAKKLIVHSSLID
KVTCPSK*

Transcript Sequence

Transcript ID

Solyc12g036220.2.1
Transcript Infomation

APOLLO (AHRD V3.3 *** U5U566_9BRAS)
Sequence

AAAATATATTTTTTTTTGGATGTTGATTGCGTGTGAGGTGAAACAATTGTGATTAGTTTC
TTGGTCCTTGTGTAAAGCACAATGGAAAACCTGACTGTCACGTTTCAGCACACAAAACCC
TCCACCGGAAGCAATACCCTAACCCTATATAAATATGCAGGCCGGCCCCTCTACTCCACA
AGAAACGACGATGGGAAGTGGGGAAGATAGGTCGGAGATAGTGTTTTTCGACGTGGAGAC
AACTATACCAACGCGAACTGGACAGAAATATGCACTCTTGGAATTTGGGGCAATTCTTGT
TTGCCCAAGAAAACTTGTTGAACAACATAGTTACTCTACCCTTGTACGACCCTCTGACCT
CTCTCTAATTTCTACCCTTTCTGTTCGCTGCAATGGAATTACCAGAGATGCTGTCACTTC
TGCCCCTTCATTTGCTGATATCGCCGATAAAGTCTTTGATGTTCTCCATGGGAGGATATG
GGCGGGCCACAATATACTGAAATTTGATTGTCCAAGGATTCGGGAGGCATTTGCTGGAAT
TAACAGGCCTGCACCAGAATCTAAGGGGACAATTGATACACTTACTTTGTTGACTGAAAA
ATTTGGAAAGAGAGCTGGTAACATGAAGATGGCCTCTCTTGCTACATATTTTGGCCTTGG
AGAGCAAACACATAGTGTGAACTGCAAGGTTTGGAATATTTTTCATTGTCTCAAGGTTGA
TGTTTTACTTTTCAGAAGTTTGGATGATGTCCGAATGAATTTCGAAGTACTAAAGCACTG
TGCAACTGTCTTGTTTTTGGAATCTAGCCTGCCTGACGTATTAACCAATAACAGTTGGGT
GTCTCCTAATGCTGCCATAAGAAGTCGTGCTAATGGAAATACTAATTCGGAGGGGATGGG
CTTGAGTATAGATACACCTTCATCAAGTGTCAAGACAGGACGTCCTATGAAATCTGTTGC
AGAAGCTTACATAGAATCAGACAATCCAATACTTCCGCTTGTGAGCAGAAATATGGAGGA
GGTACCAGATCTTATTGAAACAAATTCCTCGAGGCCTGACCCTTTTAACTTGGTCCAATT
CAGTGCAGAAGTAAGGGAATCCATTCAATTAGATGCAATGGAAGAAGAACCTGCTTCATG
TTCTCAAGATTTTTCTGCATCAATTGCAACAGAGGGTTACATTGGCTTCACAGACTTCTT
AGAACCAAATAAAATTTCAATTTCTTCTGTCTCCTCAATTCTTTCCCCCATACATCGTGG
AATGCCGAAGATACAAATCTTGCACAACAATACTGAGTTGCAAGTTTGCTCTAAATTCCT
GAAGGTGCGGTTCGGAATTAGCACAAAGTTTGTCAATTATGCTGGTCGGCCACGGTTGAG
TTTTGTGGTTGATACATCATCAGAGTTGTGCCAACTTTTGGATGCAATTGATAATCTCGC
TCAGAAGTTGAACGAGGATTCAGGTAGCATGTCAGAATGGAGGCCTTTAGTAAACAGAAA
ACCTGGCTTTATGAACTGCCCTACCGTTCGTTTAAATTTACCAACTGTTATAGATGGTAA
TATCTCCCGCTGGGTAACAGAGATATACCAGAAAGAGTCTTCTGCAACACAGAAGCTTAT
GTTCAGTAGGTTTGATGTGACAGAACTGGATTCCCTGATTACTCCAGGGACTCTGTTAGA
TGCATACTTCTTGGTGGATTCATACGACTATCAACAGATTGCAGGCATCCGGCTGGTGGC
TAAAAAATTGATTGTTCATTCCTCCCTTATAGATAAAGTGACTTGTCCATCAAAATAACA
TAATAGTTGTACAATTTGCTTCTATTGTCTAACCTAGTTCTTTACTAAGAACATGGGAGT
ATCCTGTACAGTGACAAGAATGCTATTCAAATTGTTTACTCTAATGTAATAATTTGGGTG
GTTCATCCACTTAATATAAGTTGAATGACTTTTATACAC