Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g035130.2.1
CDS Infomation

RNA helicase DEAD36
Sequence

ATGGCTGCTATTTTAACTGCATCATCTGGTCCAAGCTATGCACCAGAAGACCCCACTCTC
CCCAAACCTTGGAAAGGCCTAGTTGATGGTACAACAGGATATATCTACTTCTGGAATCCA
GAGACCAATGATACCCAATATGAGAGGCCTGTTCACTCATCCAATGGAGTGTCTGCTCTA
GCACAAAAGTCAGCTGTATTTGTTAGTTCATCTGTCCAAAAACCCTCTCAAGGTCAACAT
TATGATCCAGACGGTAGGCATAGCAGAGGTAGCAACAACAAGGTTACATCCCTGAAGGGA
GATCAGAATGCGAGAAGCAGTTCTGATCATCACGAAGGCTATGATTCTCTAGGTGTAGGA
ACTGACATATCTCAGGAATCCTATTGCCGCCACAATGAGATCTCTGTTACGGGAGGTGAT
GTTCCTGCACCTTTGACATCATTTGAAGCGACTGGGTTTCCTTCAGAGATTGTGAGGGAG
ATGCGTCAAGCTGGGTTTTCAGCTCCTACTCCAATTCAGGCACAATCGTGGCCTGTTGCC
CTTCAGGGCCGTGACATAGTAGCTATTGCCAAGACTGGGTCTGGGAAAACTTTGGGTTAC
TTAATTCCAGGCTTTATTCATCTAAAAAATCGCCGCAGTAATCCTCAATTAGGCCCAACT
ATTTTGGTTCTCTCACCAACAAGAGAGTTAGCGACACAGATACAAGCTGAAGCTGTGAAG
TTTGGGAAATCCTCTAGGATATCTTGCACGTGCTTGTATGGAGGTGCTCCAAAAGGTCCT
CAACTTCGAGAGTTGAGTAGGGGTGTAGATATTGTTGTCGCCACTCCTGGTCGTTTGAAC
GACATATTGGAAATGAGAAGGCTTAGTCTTGGTCAAGTTTCTTACCTGGTGTTAGATGAA
GCAGATCGTATGCTGGACATGGGATTTGAACCTCAGATAAGAAAGATTGTGAAAGAGGTG
CCTAAGCAGAGGCAGACATTGATGTATACAGCTACATGGCCAAAGGGGGTTCGTAAGATT
GCAGCTGATCTATTGGTTAATTCAGTTCAGGTTAATATTGGTAATGTTGACGAGCTTGCT
GCAAACAAGTCTATAACACAGCACATTGAAGTCTTGTCTTCGATGGAGAAACAACGGCGA
CTAGAACAAATTTTGAGATCCAATGAACCAGGGTCAAAGATCATTATCTTCTGTTCAACA
AAGAAAATGTGTGACCAACTATCTCGCAATCTTACTCGCAACTTTGGAGCAGCTGCAATT
CATGGGGATAAATCTCAGGGTGAGAGGGATTATGTATTAAGTCAGTTCCGCACTGGCAGG
TCTCCCGTGCTTGTGGCTACTGATGTTGCTGCGCGGGGTTTAGACATCAAAGATATCAGG
GTGGTGGTGAACTTTGACTTCCCAACTGGAATAGAGGATTATGTCCACAGAATTGGTAGG
ACAGGTCGGGCAGGGGCATCTGGTCTGGCCTATACATTTTTCTCCGATCAGGATGCTAAG
CATGCTTTAGATCTTGTTAAAGTTTTAGAAGGTGCAAATCAATCTGTCCCAACTGAACTG
CGTGATATGGTTTCGCGAGGTGGTGGTATGGGAAAGGCAAGGTGGGGTTCTGGTCAAGGT
GGACGTGGTGGGCGCTTCAATGGAAGCTATGTTAGCCGGAATGGAGGAAGGGGAGACTGG
AATAATTCGTCATCAGAAAGAGGCGGAGGACGTGGTTATGACCGGGGATCACGCGATAGT
GACAGATTTCTACGTGGGGATGCTTCAAGGAAGCGTAGTCGCAGCAGAAGCCCCAACAAG
GGTTCAGGATGGAGTGATAAAAAGAGCCGGTTTGCCTGA

Peptide Sequence

PEP ID

Solyc12g035130.2.1
PEP Infomation

RNA helicase DEAD36
Sequence

MAAILTASSGPSYAPEDPTLPKPWKGLVDGTTGYIYFWNPETNDTQYERPVHSSNGVSAL
AQKSAVFVSSSVQKPSQGQHYDPDGRHSRGSNNKVTSLKGDQNARSSSDHHEGYDSLGVG
TDISQESYCRHNEISVTGGDVPAPLTSFEATGFPSEIVREMRQAGFSAPTPIQAQSWPVA
LQGRDIVAIAKTGSGKTLGYLIPGFIHLKNRRSNPQLGPTILVLSPTRELATQIQAEAVK
FGKSSRISCTCLYGGAPKGPQLRELSRGVDIVVATPGRLNDILEMRRLSLGQVSYLVLDE
ADRMLDMGFEPQIRKIVKEVPKQRQTLMYTATWPKGVRKIAADLLVNSVQVNIGNVDELA
ANKSITQHIEVLSSMEKQRRLEQILRSNEPGSKIIIFCSTKKMCDQLSRNLTRNFGAAAI
HGDKSQGERDYVLSQFRTGRSPVLVATDVAARGLDIKDIRVVVNFDFPTGIEDYVHRIGR
TGRAGASGLAYTFFSDQDAKHALDLVKVLEGANQSVPTELRDMVSRGGGMGKARWGSGQG
GRGGRFNGSYVSRNGGRGDWNNSSSERGGGRGYDRGSRDSDRFLRGDASRKRSRSRSPNK
GSGWSDKKSRFA*

Transcript Sequence

Transcript ID

Solyc12g035130.2.1
Transcript Infomation

RNA helicase DEAD36
Sequence

ATTGGTGGACCCCAGCACTGAGGTAGACGCGTTTATTTTTTGGTTTGACATGGAGGTCTC
ACCGAACCTGGTTCTCTATAAATATCCAATCTCTGTGTAATGTCGACCTCCCTTTTATCA
CCTCACGCTTTTTTATTGTTTCTCTCTCTTTGGGTCTTGTAAACCCTAACAACAGAAGAA
AAGGGAGATATCTTTGGAGGTGGGCGGCCACTATTTATATTTAAGGTCTTCAATTTTTCT
CATACATCACATCGTCAGTTCCAGTGAGGTTATTGGAGACTGAAGTTTGAGATGGCTGCT
ATTTTAACTGCATCATCTGGTCCAAGCTATGCACCAGAAGACCCCACTCTCCCCAAACCT
TGGAAAGGCCTAGTTGATGGTACAACAGGATATATCTACTTCTGGAATCCAGAGACCAAT
GATACCCAATATGAGAGGCCTGTTCACTCATCCAATGGAGTGTCTGCTCTAGCACAAAAG
TCAGCTGTATTTGTTAGTTCATCTGTCCAAAAACCCTCTCAAGGTCAACATTATGATCCA
GACGGTAGGCATAGCAGAGGTAGCAACAACAAGGTTACATCCCTGAAGGGAGATCAGAAT
GCGAGAAGCAGTTCTGATCATCACGAAGGCTATGATTCTCTAGGTGTAGGAACTGACATA
TCTCAGGAATCCTATTGCCGCCACAATGAGATCTCTGTTACGGGAGGTGATGTTCCTGCA
CCTTTGACATCATTTGAAGCGACTGGGTTTCCTTCAGAGATTGTGAGGGAGATGCGTCAA
GCTGGGTTTTCAGCTCCTACTCCAATTCAGGCACAATCGTGGCCTGTTGCCCTTCAGGGC
CGTGACATAGTAGCTATTGCCAAGACTGGGTCTGGGAAAACTTTGGGTTACTTAATTCCA
GGCTTTATTCATCTAAAAAATCGCCGCAGTAATCCTCAATTAGGCCCAACTATTTTGGTT
CTCTCACCAACAAGAGAGTTAGCGACACAGATACAAGCTGAAGCTGTGAAGTTTGGGAAA
TCCTCTAGGATATCTTGCACGTGCTTGTATGGAGGTGCTCCAAAAGGTCCTCAACTTCGA
GAGTTGAGTAGGGGTGTAGATATTGTTGTCGCCACTCCTGGTCGTTTGAACGACATATTG
GAAATGAGAAGGCTTAGTCTTGGTCAAGTTTCTTACCTGGTGTTAGATGAAGCAGATCGT
ATGCTGGACATGGGATTTGAACCTCAGATAAGAAAGATTGTGAAAGAGGTGCCTAAGCAG
AGGCAGACATTGATGTATACAGCTACATGGCCAAAGGGGGTTCGTAAGATTGCAGCTGAT
CTATTGGTTAATTCAGTTCAGGTTAATATTGGTAATGTTGACGAGCTTGCTGCAAACAAG
TCTATAACACAGCACATTGAAGTCTTGTCTTCGATGGAGAAACAACGGCGACTAGAACAA
ATTTTGAGATCCAATGAACCAGGGTCAAAGATCATTATCTTCTGTTCAACAAAGAAAATG
TGTGACCAACTATCTCGCAATCTTACTCGCAACTTTGGAGCAGCTGCAATTCATGGGGAT
AAATCTCAGGGTGAGAGGGATTATGTATTAAGTCAGTTCCGCACTGGCAGGTCTCCCGTG
CTTGTGGCTACTGATGTTGCTGCGCGGGGTTTAGACATCAAAGATATCAGGGTGGTGGTG
AACTTTGACTTCCCAACTGGAATAGAGGATTATGTCCACAGAATTGGTAGGACAGGTCGG
GCAGGGGCATCTGGTCTGGCCTATACATTTTTCTCCGATCAGGATGCTAAGCATGCTTTA
GATCTTGTTAAAGTTTTAGAAGGTGCAAATCAATCTGTCCCAACTGAACTGCGTGATATG
GTTTCGCGAGGTGGTGGTATGGGAAAGGCAAGGTGGGGTTCTGGTCAAGGTGGACGTGGT
GGGCGCTTCAATGGAAGCTATGTTAGCCGGAATGGAGGAAGGGGAGACTGGAATAATTCG
TCATCAGAAAGAGGCGGAGGACGTGGTTATGACCGGGGATCACGCGATAGTGACAGATTT
CTACGTGGGGATGCTTCAAGGAAGCGTAGTCGCAGCAGAAGCCCCAACAAGGGTTCAGGA
TGGAGTGATAAAAAGAGCCGGTTTGCCTGAAGAATTTGATCAGGCTCTTGCGTGTAATAC
AATTTGCAAATGGATCTATTGCTTGCTTAGAAGAGGAGGAAGAAGAGGGGGGCATGATTT
GTTAGAATATTGTATACTTGAAAGTGAACCAAAGGAGAGTATTATTTTATCCATGAAATT
TGTCCATTTGGCTCCTTTGTGCTTGCTGGACCTTGATATTTATCTAACTGTTTCTTTTCT
GAACATTATTAAGAGCATGTATGTATTCTAGAAAGAAATATAGCTAGCACAAGTAAATGT
TGAATGTTACATTGACGTTCCATTTTCTTTCCATGAGCTTGCCTATAATTTCAGTGAGCG
ACTTTGGAGAGTCTGCGACTCGTACAGATAAAAATATTGATGGCATACTGAAGTGTTATA
TTACATATTGAAGATTATTGTGAGCTACTGAAGTTTTAATGCCTATTGAAGAATAAAACT
TTGGAGTTAGACTGCACTATTAGTTTAACTCTTCATCTCCATCAGACTGCACTATTAGTT
AACTCTTCATCTCCATCAGTTCTTGTTCAAAATGATCTCCAGAAGTTGTTAAAGATTTCA
CAAGACATGAACACCAACAAACAAGCAGAACAGATAAAAATCGTTTTTTAATTTATCCCA
AGGATCATGTGGCGTAATTTCAAGGAAACAAAGCAGCCAACCAACTTGTAACTCATTTTT
TATTAGAGTCCGGAGTCAAAAGGGCAAA