Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g020050.2.1
CDS Infomation

DNA-binding protein DQ117941
Sequence

ATGTGGGCAGTTCGTCGAGCGTCTTCTTCCTTCAAGAAACAAGTATTTATAACCGGAGGC
TCTCGAATATGTTATTCCACTCTAGATATTACAAGTCACTGCCTGAAAGGACACAATGAT
GGGCTTAAAGGGGATTCCAATGTAATATCACATAGAGCTCTTACACTTGGAGGATACCAA
ATAACATCTCATGGTTTTCTAAGAGTATTCAAGGAAAGCCGAAGTTTTTCTTCACAAGCT
GGCACAAAGAGCAGTGGAGAGGAGGATAGTAATTCAGACGATGGATTTTCAGAGCTTGAA
TCTTCTAGTGCAACTGAGGCAATACAAGAAGTCAACAAAGTTGATGAGTCAGTCTCTGAG
CATGAGATTTCCGATGAGGATCTTGATGGTGAAGATGTGGAAGCACCTCAGGAATTATTG
TCTGATACCGAGGCTGAGATTAACAAACGGAAGTCTCCAAGGAACGGAGTTTCTTCAGCA
TTATTCAATGCTGTCATGGCAGCACCAGCTTTACGTGTTAGTAAAATCATGGATAAATGG
GTTGAAGGAAATAACGTCACACGGGTAGAAGTAGCATCAGCGATGCTTAATTTTCGTAAA
AGGCGCATGTACGGGAAGGCACTGCAGCTCTCTGAGTGGTTGGAGTCAAGCAATCAGCTC
ACTTTTATTGACAGAGACTATGCTTCTCGTGTTGATTTAATTGCCAAAGTCCTTGGTCTG
AAGAAGGCAGAAGATTATATTGGGACTATACCAGAGTCTTTCAGAAATGAAGTTATTTAT
CGCACTTTATTGGCCAATTGTGTTGCTGAAGGTGATTTGAAGAAATCTGAGCAGATTTTT
AACAAAATGAAGGACCTTGAATTCCCATTAACATGCTTTTCTTACAATCAGTTGCTCCTT
CTATATAAGAAGACTGATAAAAAGAAGATCGCCGATGTTCTCTTGCTAATGGAGAAGGAA
AATGTGAAGCCAACCCATTTTACATACAGACTATTGATAGATGTCAAGGGGCAATTCAAC
GACATATCTGGAATGGAGCAAATTGTTGAGACCATGAAGGCTGAAGGACTAGAACCTGAT
CTCACCACAAAGAGCATCTTGGTGAAGCATTATATCTCGGGTGGTCTGAATGAGAAGGCC
GAGAATGTACTAAAAGAGATGGAAGGAGGAGATAAAAAAGCAACTCGCTGGGCATGTCGT
AGTTTGCTTCCTCATTATGCAGCTCTTGGAAGGGCCAACGAAGTTGCTAGAATTTGGCAC
GTTTGTGAGTCTAATCCTCGTCTTGAAGAATGTGTGGCTGCTATAGATGCTTGGGGAAAA
CTGCATAATATTAAGGAGGCGGAGGCAATATTTGAAAAGATGGCAGCAAAATGGCCAACA
CTGTCATCGAAGCATTATTCTGTTTTATTGAACATTTATGCAAATCATAAGATGCTGTCA
AAAGGAAAGGACCTTGTGAAGCGTATGGCTGACAGTGGTTGCCGTATTGGACCAGTGACT
TGGGATGCCTTAGTCAGACTTTATATTGAAGCTGGAGAAGTGGAAAAAGCGGATTCAATA
TTACATAAAGCTGGAGAGCAGAATCGGTTGAGGCCAATGATTTATTCTTATTTGATGATT
ATGGACCAATATGCAAAGAAAGGTGATATTCATAATACTGAGAAAATGTTTCACAGAATG
AGACAAGCTGGATATGTTTCCCGAGCTACTCAGTACCAATACCTTATTCGTGCGTATATA
AATGCCAAAGCTCCTTGTTATGGTATTGCTGATAGAATGAAGGCGGATAATATATTCCCG
AATAAAGGATTGACAAACATGTTGGCTCAGGTGGATGCATTCAAGAAGAATGCTGTGTCT
GATTTGTTGGATTGA

Peptide Sequence

PEP ID

Solyc12g020050.2.1
PEP Infomation

DNA-binding protein DQ117941
Sequence

MWAVRRASSSFKKQVFITGGSRICYSTLDITSHCLKGHNDGLKGDSNVISHRALTLGGYQ
ITSHGFLRVFKESRSFSSQAGTKSSGEEDSNSDDGFSELESSSATEAIQEVNKVDESVSE
HEISDEDLDGEDVEAPQELLSDTEAEINKRKSPRNGVSSALFNAVMAAPALRVSKIMDKW
VEGNNVTRVEVASAMLNFRKRRMYGKALQLSEWLESSNQLTFIDRDYASRVDLIAKVLGL
KKAEDYIGTIPESFRNEVIYRTLLANCVAEGDLKKSEQIFNKMKDLEFPLTCFSYNQLLL
LYKKTDKKKIADVLLLMEKENVKPTHFTYRLLIDVKGQFNDISGMEQIVETMKAEGLEPD
LTTKSILVKHYISGGLNEKAENVLKEMEGGDKKATRWACRSLLPHYAALGRANEVARIWH
VCESNPRLEECVAAIDAWGKLHNIKEAEAIFEKMAAKWPTLSSKHYSVLLNIYANHKMLS
KGKDLVKRMADSGCRIGPVTWDALVRLYIEAGEVEKADSILHKAGEQNRLRPMIYSYLMI
MDQYAKKGDIHNTEKMFHRMRQAGYVSRATQYQYLIRAYINAKAPCYGIADRMKADNIFP
NKGLTNMLAQVDAFKKNAVSDLLD*

Transcript Sequence

Transcript ID

Solyc12g020050.2.1
Transcript Infomation

DNA-binding protein DQ117941
Sequence

TTAAAAATAAAATTATTTGAATCTCAAAGTCGAAAAAATGTCAAGAAGTATCAAATTATA
TATTTATAGTACGATTCTTAATAGGGTTTGCAAACCGGGTCAAAAAGAATATCTTAAAGG
CGAACTCAAAAAGAAAGGGTTTTTAGGGTTTAAGGATTCTTCAGTTTTCCACGCTTTGAC
GAAGGAACCATGTGGGCAGTTCGTCGAGCGTCTTCTTCCTTCAAGAAACAAGTATTTATA
ACCGGAGGCTCTCGAATATGTTATTCCACTCTAGATATTACAAGTCACTGCCTGAAAGGA
CACAATGATGGGCTTAAAGGGGATTCCAATGTAATATCACATAGAGCTCTTACACTTGGA
GGATACCAAATAACATCTCATGGTTTTCTAAGAGTATTCAAGGAAAGCCGAAGTTTTTCT
TCACAAGCTGGCACAAAGAGCAGTGGAGAGGAGGATAGTAATTCAGACGATGGATTTTCA
GAGCTTGAATCTTCTAGTGCAACTGAGGCAATACAAGAAGTCAACAAAGTTGATGAGTCA
GTCTCTGAGCATGAGATTTCCGATGAGGATCTTGATGGTGAAGATGTGGAAGCACCTCAG
GAATTATTGTCTGATACCGAGGCTGAGATTAACAAACGGAAGTCTCCAAGGAACGGAGTT
TCTTCAGCATTATTCAATGCTGTCATGGCAGCACCAGCTTTACGTGTTAGTAAAATCATG
GATAAATGGGTTGAAGGAAATAACGTCACACGGGTAGAAGTAGCATCAGCGATGCTTAAT
TTTCGTAAAAGGCGCATGTACGGGAAGGCACTGCAGCTCTCTGAGTGGTTGGAGTCAAGC
AATCAGCTCACTTTTATTGACAGAGACTATGCTTCTCGTGTTGATTTAATTGCCAAAGTC
CTTGGTCTGAAGAAGGCAGAAGATTATATTGGGACTATACCAGAGTCTTTCAGAAATGAA
GTTATTTATCGCACTTTATTGGCCAATTGTGTTGCTGAAGGTGATTTGAAGAAATCTGAG
CAGATTTTTAACAAAATGAAGGACCTTGAATTCCCATTAACATGCTTTTCTTACAATCAG
TTGCTCCTTCTATATAAGAAGACTGATAAAAAGAAGATCGCCGATGTTCTCTTGCTAATG
GAGAAGGAAAATGTGAAGCCAACCCATTTTACATACAGACTATTGATAGATGTCAAGGGG
CAATTCAACGACATATCTGGAATGGAGCAAATTGTTGAGACCATGAAGGCTGAAGGACTA
GAACCTGATCTCACCACAAAGAGCATCTTGGTGAAGCATTATATCTCGGGTGGTCTGAAT
GAGAAGGCCGAGAATGTACTAAAAGAGATGGAAGGAGGAGATAAAAAAGCAACTCGCTGG
GCATGTCGTAGTTTGCTTCCTCATTATGCAGCTCTTGGAAGGGCCAACGAAGTTGCTAGA
ATTTGGCACGTTTGTGAGTCTAATCCTCGTCTTGAAGAATGTGTGGCTGCTATAGATGCT
TGGGGAAAACTGCATAATATTAAGGAGGCGGAGGCAATATTTGAAAAGATGGCAGCAAAA
TGGCCAACACTGTCATCGAAGCATTATTCTGTTTTATTGAACATTTATGCAAATCATAAG
ATGCTGTCAAAAGGAAAGGACCTTGTGAAGCGTATGGCTGACAGTGGTTGCCGTATTGGA
CCAGTGACTTGGGATGCCTTAGTCAGACTTTATATTGAAGCTGGAGAAGTGGAAAAAGCG
GATTCAATATTACATAAAGCTGGAGAGCAGAATCGGTTGAGGCCAATGATTTATTCTTAT
TTGATGATTATGGACCAATATGCAAAGAAAGGTGATATTCATAATACTGAGAAAATGTTT
CACAGAATGAGACAAGCTGGATATGTTTCCCGAGCTACTCAGTACCAATACCTTATTCGT
GCGTATATAAATGCCAAAGCTCCTTGTTATGGTATTGCTGATAGAATGAAGGCGGATAAT
ATATTCCCGAATAAAGGATTGACAAACATGTTGGCTCAGGTGGATGCATTCAAGAAGAAT
GCTGTGTCTGATTTGTTGGATTGATTGATGTGATATAACCTACTTTTCTTGTGATGGAGG
ATCTTGCATTCCTCTTACACAGCAGTCAAGTCAGTTGTAGGATGAACACTACTATTTTGC
TTCCTTTTCTTCTAACTTAGGTTATCATGTTTGCTTAAACCTTCCTTTTTGTTTTTGACT
TTATTAGCAAATAATTCTGTTGGACGAATTTATTGACATTGTTTAGTTTGAAGTTGAAGT
GTAAAAAAAGGTCCCAAACATTGAACTGGATGGGAGAAAAAAAGCACTCGACTCTTTGGT
TTCCACAATCTGCAATGTGAAATAACCTCCCTTACCAAATAATTAGGATTTAGGATAAAA
TTGATAATCTTTAATGATAATATGGAAGTGCTTACGCTAAATAGTTCCCTTGAACT