Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc12g019860.2.1
CDS Infomation	CCR4-NOT transcription complex subunit 3 (AHRD V3.3 *** W9RL65_9ROSA)
Sequence	ATGGGAGCGAGTCGAAAGTTACAAGGTGAAATAGATCGAGTTCTGAAGAAAGTTCAGGAA GGCGTTGATGTCTTCGATAGCATATGGAACAAGGTTTATGATACGGATAATGCTAACCAG AAGGAAAAATTTGAAGCGGATTTGAAAAAGGAGATTAAAAAGCTTCAGAGGTATAGAGAC CAAATCAAAACATGGATTCAATCCAGTGAAATCAAAGATAAAAAGGTAAGTGCATCATAT GAGCAAGCATTGATGGATGCTCGTAAGCTTATTGAGCGTGAAATGGAACGATTCAAAATA TGTGAGAAAGAAACTAAGACCAAAGCATTTTCAAAAGAAGGCTTGGGCCAACAGCCAAAG ACGGACCCAAAGGAGAAGGCTAAGTCAGAGACAAGAGATTGGTTGAATAATGTGGTTGGG GAGCTTGAAAGTCAAATTGACAATTTCGAGGCTGAACTGGAAGGACTCTCAGTTAAAAAA GGGAAGCAGAGGCCCCCAAGATTGGTACATTTGGAAACATCTATTGCTCGGCACAAGGCT CATATAATGAAGTTAGAGTTAATTTTAAGATTACTGGATAATGATGAGTTGAGTCCTGAG CAAGTCAACGATGTCAAGGATTTCCTCGACGATTATGTGGAAAGAAATCAGGAGGATTTT GATGAATTCAGTGATGTTGATGAGCTCTACAGCACTTTACCACTAGATAAGGTGGAGTCT CTTGAAGATCTGGTTACCGTCGTTCCACCTGCTCTTGTCAAGGGTGTCACTGTTCCCAGT GCGGTTTTGAGTGTGAAAACTTCTCTGGCCTCTCCACCTGCTCAAGCATCGGTGGCTGTA ACATCTTTAGCACAGCAAGCTGCTAGTGTTCAGGATCAATCTGATGAAGTAGCATCACAG GACAGTAGCTCTGAAATAGTTGTTAGAACCCCACCTCCTAAAAGTAGTGCAGTTGCTACT TCTGCTCCCACAACGCCTGCTGGGAGTCATGCAACCCAGGGTGCTGCTGCTTTATCTCCA ACTAGTATGTCAAATGCAATAAAAGAAGACGATCTGACAAGTTTTCCAGCTCGAAAGCCT TCCCCTGCCCTTAGTGAAACTGCTTTAAGAGGTGTTAGTAGAGGTGCTCTATCTAACCAA CCCGTGGCTAGTATTGCACTTGGTTCTACTGGTTCAGTTACTGGCAATGGAGGTCTAGGA GCTATTCCATCTGCTTCTGAAGTTACAAAGAGAAATATCTTAGTTTCAGAGGAGAGGCTT GGAAGTAGCAGCATGGGACAGCCTTTGGTATCCCCACTGGCTAACAGAATGATGATGTCA CAAGCAGCTAAGGCTACAGATGGAATTGGTGTTGCTGATGGGGCAAATCTCGGTGATGCT ACGGTCATGACTGGTAGAGTATTCTCTCCTTCTGTTGGTCCTGGTATGCAGTGGAGGCCT GGTAGTTCCTTTCAGAATCAAAATGAAGCGGGACAATTCCGTGGAAGAACTGAAATTGCA CCTGACCAGAGGGAGAAGTTTTTGCAAAAATTTCAGCAAGTACAGCAAGGTCAGGGTAAT CTTCTTGGCGTACCTCCATTTAGTGGTGGAAACCTTAAGCAGTTCTCGTCCCAGCAACAG AATCCACTTTTGCCACAGTTCAATTCTCAAAGCTCCTCTGTCACTCCTCAACTTGGACTT GGAGTTGGGGCCCAAGCTGTTGGTATTAACAACATTGCCTCATCTGCATCTTTGCAGCAA CAACCAGATGTAGGCCACTCAAAAGCTGAAGAGTTGCAGCAACAACAGATTTTGCCTGAG GATTCTTCTGCCGATCCTTCTGTGAATGCTGGGCTCGGGAAAAATCTTTTGAATGAGGAT GATATGAAGGCTTCATATGGATTAGATACCCCAATGCAGGGAGGGGTCGCTGAAGCATCC CCTAGGCCTAGGGATACAGATCTATCTCCTGGGCAACCTTTGCAATCCAGTCAGTCATCT GGAAGTCTTGGAGTTATTGGTCGAAGGAGTGTTGCTGACCTCGGAGCAATTGGTGATAGC CTGAGTGTGACCTCTGCAAATTCTTCAGGAATGCATGACCAGATATACAACTTGCAGATG CTTGAATCTGCCTTTCACAAACTTCCTCTGGCCAAAGATTCTGAACGAGCAAAGAGCTAC ACACCGAGGCACCCTGCAGTTACCCCTTCAAGCTATCCCCAAGTACAGGCTCCCATTGTC AACAATCCTGGCTTCTGGGAAAGACTTGGAGCTGATAACTATGGCACAGACACTCTGTTC TTTGCATTTTACTACCAACAGAATACTTATCAGCAGTACCTGGCTGCGAAGGAGTTGAAG AAACAGTCTTGGAGGTATCACAGAAAGTATAACACATGGTTTCAGCGGCATGAGGAGCCA ACTGTTGCCACTGATGACTTTGAACAGGGAACATATGTCTACTTTGATTTCCACATAGCC AATGATGAACAACATGGATGGTGCCAGAGGATCAAGCAGGAGTTCACATTTGAGTACAAT TTTCTTGAAGATGAGCTCATTGTATAG

Peptide Sequence

PEP ID	Solyc12g019860.2.1
PEP Infomation	CCR4-NOT transcription complex subunit 3 (AHRD V3.3 *** W9RL65_9ROSA)
Sequence	MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD QIKTWIQSSEIKDKKVSASYEQALMDARKLIEREMERFKICEKETKTKAFSKEGLGQQPK TDPKEKAKSETRDWLNNVVGELESQIDNFEAELEGLSVKKGKQRPPRLVHLETSIARHKA HIMKLELILRLLDNDELSPEQVNDVKDFLDDYVERNQEDFDEFSDVDELYSTLPLDKVES LEDLVTVVPPALVKGVTVPSAVLSVKTSLASPPAQASVAVTSLAQQAASVQDQSDEVASQ DSSSEIVVRTPPPKSSAVATSAPTTPAGSHATQGAAALSPTSMSNAIKEDDLTSFPARKP SPALSETALRGVSRGALSNQPVASIALGSTGSVTGNGGLGAIPSASEVTKRNILVSEERL GSSSMGQPLVSPLANRMMMSQAAKATDGIGVADGANLGDATVMTGRVFSPSVGPGMQWRP GSSFQNQNEAGQFRGRTEIAPDQREKFLQKFQQVQQGQGNLLGVPPFSGGNLKQFSSQQQ NPLLPQFNSQSSSVTPQLGLGVGAQAVGINNIASSASLQQQPDVGHSKAEELQQQQILPE DSSADPSVNAGLGKNLLNEDDMKASYGLDTPMQGGVAEASPRPRDTDLSPGQPLQSSQSS GSLGVIGRRSVADLGAIGDSLSVTSANSSGMHDQIYNLQMLESAFHKLPLAKDSERAKSY TPRHPAVTPSSYPQVQAPIVNNPGFWERLGADNYGTDTLFFAFYYQQNTYQQYLAAKELK KQSWRYHRKYNTWFQRHEEPTVATDDFEQGTYVYFDFHIANDEQHGWCQRIKQEFTFEYN FLEDELIV*

Transcript Sequence

Transcript ID	Solyc12g019860.2.1
Transcript Infomation	CCR4-NOT transcription complex subunit 3 (AHRD V3.3 *** W9RL65_9ROSA)
Sequence	CGCGAGAAACATACAAGTGGAAAAAGAAATTTTATTTGTTCTATGCTAAACTGGGCAAAA GGAATACGGCGTATGAGTATGAACCCCCAAATCTAAAGCCCTAAAAACCAAAAACGAGAT ATAACTAATCGAATTACTTTACTCAACCCTACTGGGTTTTGTCTGATCAATCATCGGTGT CTTCTTCACTGAGTTGCAATGGGAGCGAGTCGAAAGTTACAAGGTGAAATAGATCGAGTT CTGAAGAAAGTTCAGGAAGGCGTTGATGTCTTCGATAGCATATGGAACAAGGTTTATGAT ACGGATAATGCTAACCAGAAGGAAAAATTTGAAGCGGATTTGAAAAAGGAGATTAAAAAG CTTCAGAGGTATAGAGACCAAATCAAAACATGGATTCAATCCAGTGAAATCAAAGATAAA AAGGTAAGTGCATCATATGAGCAAGCATTGATGGATGCTCGTAAGCTTATTGAGCGTGAA ATGGAACGATTCAAAATATGTGAGAAAGAAACTAAGACCAAAGCATTTTCAAAAGAAGGC TTGGGCCAACAGCCAAAGACGGACCCAAAGGAGAAGGCTAAGTCAGAGACAAGAGATTGG TTGAATAATGTGGTTGGGGAGCTTGAAAGTCAAATTGACAATTTCGAGGCTGAACTGGAA GGACTCTCAGTTAAAAAAGGGAAGCAGAGGCCCCCAAGATTGGTACATTTGGAAACATCT ATTGCTCGGCACAAGGCTCATATAATGAAGTTAGAGTTAATTTTAAGATTACTGGATAAT GATGAGTTGAGTCCTGAGCAAGTCAACGATGTCAAGGATTTCCTCGACGATTATGTGGAA AGAAATCAGGAGGATTTTGATGAATTCAGTGATGTTGATGAGCTCTACAGCACTTTACCA CTAGATAAGGTGGAGTCTCTTGAAGATCTGGTTACCGTCGTTCCACCTGCTCTTGTCAAG GGTGTCACTGTTCCCAGTGCGGTTTTGAGTGTGAAAACTTCTCTGGCCTCTCCACCTGCT CAAGCATCGGTGGCTGTAACATCTTTAGCACAGCAAGCTGCTAGTGTTCAGGATCAATCT GATGAAGTAGCATCACAGGACAGTAGCTCTGAAATAGTTGTTAGAACCCCACCTCCTAAA AGTAGTGCAGTTGCTACTTCTGCTCCCACAACGCCTGCTGGGAGTCATGCAACCCAGGGT GCTGCTGCTTTATCTCCAACTAGTATGTCAAATGCAATAAAAGAAGACGATCTGACAAGT TTTCCAGCTCGAAAGCCTTCCCCTGCCCTTAGTGAAACTGCTTTAAGAGGTGTTAGTAGA GGTGCTCTATCTAACCAACCCGTGGCTAGTATTGCACTTGGTTCTACTGGTTCAGTTACT GGCAATGGAGGTCTAGGAGCTATTCCATCTGCTTCTGAAGTTACAAAGAGAAATATCTTA GTTTCAGAGGAGAGGCTTGGAAGTAGCAGCATGGGACAGCCTTTGGTATCCCCACTGGCT AACAGAATGATGATGTCACAAGCAGCTAAGGCTACAGATGGAATTGGTGTTGCTGATGGG GCAAATCTCGGTGATGCTACGGTCATGACTGGTAGAGTATTCTCTCCTTCTGTTGGTCCT GGTATGCAGTGGAGGCCTGGTAGTTCCTTTCAGAATCAAAATGAAGCGGGACAATTCCGT GGAAGAACTGAAATTGCACCTGACCAGAGGGAGAAGTTTTTGCAAAAATTTCAGCAAGTA CAGCAAGGTCAGGGTAATCTTCTTGGCGTACCTCCATTTAGTGGTGGAAACCTTAAGCAG TTCTCGTCCCAGCAACAGAATCCACTTTTGCCACAGTTCAATTCTCAAAGCTCCTCTGTC ACTCCTCAACTTGGACTTGGAGTTGGGGCCCAAGCTGTTGGTATTAACAACATTGCCTCA TCTGCATCTTTGCAGCAACAACCAGATGTAGGCCACTCAAAAGCTGAAGAGTTGCAGCAA CAACAGATTTTGCCTGAGGATTCTTCTGCCGATCCTTCTGTGAATGCTGGGCTCGGGAAA AATCTTTTGAATGAGGATGATATGAAGGCTTCATATGGATTAGATACCCCAATGCAGGGA GGGGTCGCTGAAGCATCCCCTAGGCCTAGGGATACAGATCTATCTCCTGGGCAACCTTTG CAATCCAGTCAGTCATCTGGAAGTCTTGGAGTTATTGGTCGAAGGAGTGTTGCTGACCTC GGAGCAATTGGTGATAGCCTGAGTGTGACCTCTGCAAATTCTTCAGGAATGCATGACCAG ATATACAACTTGCAGATGCTTGAATCTGCCTTTCACAAACTTCCTCTGGCCAAAGATTCT GAACGAGCAAAGAGCTACACACCGAGGCACCCTGCAGTTACCCCTTCAAGCTATCCCCAA GTACAGGCTCCCATTGTCAACAATCCTGGCTTCTGGGAAAGACTTGGAGCTGATAACTAT GGCACAGACACTCTGTTCTTTGCATTTTACTACCAACAGAATACTTATCAGCAGTACCTG GCTGCGAAGGAGTTGAAGAAACAGTCTTGGAGGTATCACAGAAAGTATAACACATGGTTT CAGCGGCATGAGGAGCCAACTGTTGCCACTGATGACTTTGAACAGGGAACATATGTCTAC TTTGATTTCCACATAGCCAATGATGAACAACATGGATGGTGCCAGAGGATCAAGCAGGAG TTCACATTTGAGTACAATTTTCTTGAAGATGAGCTCATTGTATAGAATTTGTTTATACCT GTAACATTTATTTTTCCATCTGCCCTATTTTCTTTTGGCTGTCTAAATTACATGGTTTGT ACGGTAGTTTATATGTTTCGAAGGCGTGTCTAGTTTGATGCTTTAGACGCCTTCATTTAA AAAAACCGAGCAGAGATCAGGATTCAAATTTCATACATACCTCTCTACATGCTGTTATAG ATTCGTTAGAGAAATAGAAACATTAGCTAATCTCTTGTTTGCATATTTTGGTTCAGAAGG TCGAAAGTTAGATTGATGCAAATATAGGAAGTTGCATATGAACATAGCGCCACATAAAAT GGAAACATAGTGCCACTGTCTGTTTGAACGTTTCA