Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc12g019470.2.1
CDS Infomation	Nonsense-mediated mRNA decay protein 2 isoform 2 (AHRD V3.3 *** A0A061EJP7_THECC)
Sequence	ATGGGAAAAAATCAAGCTTACAAAGCTATGCAGCGAGCAAGGTTGGGTTCTAGCTCAGGT GGACCTGATGAAGTTGATGATGGAATGGTGGATGGTTCTTTTCATACACCAGAGTGGCAT GCGGCTCGTTTAGCAAGCCTCAAAACATCTCATACAGTTACCTGGGAAGAGTTCAAACAG AAACAGAAGGAAGAAGAAGTGAGAAAAGGAGAGCTAGAAGCAGACAAAGATAAAATGATG AGGGAATACAGGGCTCAGCTAGATGCTGAAAGGGCCAGCAAACTCTCTCATGGAAGGAAT CATTCCAGCAGTAAACACAGCCGCAAAAAGGATAAGAAGGACAAAGATGCTAGGAAACAG AGAAGCAAAAAGAGAAAGCGTTCAAGGAGATATTCCGATTCCAGCTCTTCAAGCTCATCA TCTGAATCTTCAAGTTCTGACGATGAAGATAGAGAATCCAGAAAATCAAGATCCAAGTCT AAGAGAAGGAAGAAAGAAAAGAAGCATCAGTTGAGGTCGAGGTTGAAGCAGTCTACAAGC GACGATGAAGCTGATGGTCCTTTGCCGCTTTCTAGATTCTTTGGCAGCATAAAAAGCTAA

Peptide Sequence

PEP ID	Solyc12g019470.2.1
PEP Infomation	Nonsense-mediated mRNA decay protein 2 isoform 2 (AHRD V3.3 *** A0A061EJP7_THECC)
Sequence	MGKNQAYKAMQRARLGSSSGGPDEVDDGMVDGSFHTPEWHAARLASLKTSHTVTWEEFKQ KQKEEEVRKGELEADKDKMMREYRAQLDAERASKLSHGRNHSSSKHSRKKDKKDKDARKQ RSKKRKRSRRYSDSSSSSSSSESSSSDDEDRESRKSRSKSKRRKKEKKHQLRSRLKQSTS DDEADGPLPLSRFFGSIKS*

Transcript Sequence

Transcript ID	Solyc12g019470.2.1
Transcript Infomation	Nonsense-mediated mRNA decay protein 2 isoform 2 (AHRD V3.3 *** A0A061EJP7_THECC)
Sequence	ATCCATCTTTCAAGTCCGGTAATTCCCAAATTGTTGTATTTTTGCTTGTGGAAAAGAAGA TCTATACCAATCTGTTATCATCGTGTGTTTTGATAACCCTTTCATCTCAAAGTCCACCCC AAAACCTATAAAGTTTCCTCAAGATCTTCCTTTTTATGCCACAACTACTCTCTTTTTGCT CTTGAAATTGTTCGTTCTGAACTGGGGGTTTTCCCTTTTGATTTTGAACCCAAAAGTAAA AAAAATGGGAAAAAATCAAGCTTACAAAGCTATGCAGCGAGCAAGGTTGGGTTCTAGCTC AGGTGGACCTGATGAAGTTGATGATGGAATGGTGGATGGTTCTTTTCATACACCAGAGTG GCATGCGGCTCGTTTAGCAAGCCTCAAAACATCTCATACAGTTACCTGGGAAGAGTTCAA ACAGAAACAGAAGGAAGAAGAAGTGAGAAAAGGAGAGCTAGAAGCAGACAAAGATAAAAT GATGAGGGAATACAGGGCTCAGCTAGATGCTGAAAGGGCCAGCAAACTCTCTCATGGAAG GAATCATTCCAGCAGTAAACACAGCCGCAAAAAGGATAAGAAGGACAAAGATGCTAGGAA ACAGAGAAGCAAAAAGAGAAAGCGTTCAAGGAGATATTCCGATTCCAGCTCTTCAAGCTC ATCATCTGAATCTTCAAGTTCTGACGATGAAGATAGAGAATCCAGAAAATCAAGATCCAA GTCTAAGAGAAGGAAGAAAGAAAAGAAGCATCAGTTGAGGTCGAGGTTGAAGCAGTCTAC AAGCGACGATGAAGCTGATGGTCCTTTGCCGCTTTCTAGATTCTTTGGCAGCATAAAAAG CTAATGCCTCATTTGACATGTAATTCTACTTCTTCTTCTGATGATATTGGATGTGATGGA TCCTTTTATTTATTATTATAATGTTATCGAGGATCGTTGGTTCGTCAATGAGGGTTATGT ATCCTGGTTTTAAATGAAATATTACATTTAGTGAAAACAATTGTAAAACTACTTACACAT GTTCCAAGCTCCCATACTTATATTTTTGGAAAGGCTTCTTTCTACTTGCAGACTCATAAT GAAGTGGAAGAAGGGTCATGTAAACTTTTAGTCTAAGCTTACAAGAGTAGTTCACAAAAT TGCATCAACAAAACTATCAAGCAATGAGAAAACATGTGAGTCTA