Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g019410.2.1
CDS Infomation

Integrin-linked protein kinase family (AHRD V3.3 *** AT2G43850.3)
Sequence

ATGAAGAAGTTAAAGAAAGGAATATCGAGGCAATTCTCAACAGAGTTGTTTAGGAAGAGT
GGAAAATTCAGTTTCAAGAGGCAGAGTTCATTGGATCCAAGGAGGAACAATTTGCGGTTT
AGTTTTGGGAGGCAATCATCGCTTGATCCGCTTCGAAGGAGCCCTTCGATAGAAAATGCT
GAGAGAACTGTGCCAGAGAATCTTGATTCGACGATGCAGCTGTTATTCATGGCGTGTAAA
GGGGACGTGAAGGGAGTTCAGGACTTGTTGGATGAAGGTATTGATGTGAATAGCATTGAT
TTGGATGGAAGGACTGCTCTTCATATTGCTGCCTGTGAAGGTCACGTGGAAGTTGCCAAG
CTATTGTTGAGTAGGAAGGCTAATATGAATGCTCGTGATCGGTGGGGTAGTACGGCAGCA
GCTGATGCCAAACATTATGGTAATGCTGAAGTTTACGAAATGTTGAAGGCCCGTGGAGCC
AAAGTCCCGAAAGTCGGAAAGACGCCAATGGCTGTAGCAAATCCACGAGAAGTTCCAGAA
TATGAACTAAACCCTCTGGAGCTTCAAATCCGCAAAAGTGATGGAATCTCAAAGGCAAGT
GTTCTATGTTTTGTTAATCAGCGCTGTGATGTTTCAATTATGGGTTCATATCAAGTTGCC
AAATGGAATGGAACGAAAGTTTCCGTAAAAATACTTGACAAGGATAGCTATAAAGATCCT
GAAAGCATAAATGCTTTCAAACATGAATTAACTTTGCTAGAAAAAGTGCGGCATCCAAAT
GTAGTTCAGTTTGTTGGAGCAGTTACACAAAATATACCAATGATGATAGTGTCAGAGTAT
CATCCAAGGGGTGATCTAGGTAGCTATCTTCAGAAAAAGGGACGTATATCTCCTTCTAAG
GCGCTTAAATATGCTCTTGATGTTGCTAGGCAAGTCGTTCTTTGTCATAAAAGTGAAATG
ATCTGTGGCAATACCTCTACTCTTTGGGGTATGAACTACCTTCACGAGTGCAAACCAGAC
CCAATTATACATTGCAATCTAAATCCAAAAAATATTTTGCTTGACGATGGAGATCACCTG
AAAGTTGCTGGATTTGGTCTTATTAAATTGTCAAAAATTTCACCTGACAAAGCAAAGTTG
GTGCAGCCGGAGGGTTTTGACCGTTCAAGTCCCTATGTAGCACCTGAGATTTATAAAGAT
GAAATATTTGACCGGAATGCGGACATATATTCATTTGGCATTTTACTCTATGAGATGCTG
GAGGGAACACCACCTTTTAATACCAAGTCTCCAGAAGAGACTGCCAGGTTGATGTGCTTA
GAAGGCCAGAGACCAGTATTCAAATCGAAATCCAAATATCCTCCTGAGCTTAGAGAGTTG
ATTGAAGAATGTTGGGATCCAGAAGCTTTTGTCCGGCCAACATTTTCTGAGGTTGTAAGT
GTACATGAAGGTGTCAAGAAGATGGACAATAATTGGGGTCAATGGAGTTTATCAGCGGAA
GATTCATGTGGAGCTTTCAATTGA

Peptide Sequence

PEP ID

Solyc12g019410.2.1
PEP Infomation

Integrin-linked protein kinase family (AHRD V3.3 *** AT2G43850.3)
Sequence

MKKLKKGISRQFSTELFRKSGKFSFKRQSSLDPRRNNLRFSFGRQSSLDPLRRSPSIENA
ERTVPENLDSTMQLLFMACKGDVKGVQDLLDEGIDVNSIDLDGRTALHIAACEGHVEVAK
LLLSRKANMNARDRWGSTAAADAKHYGNAEVYEMLKARGAKVPKVGKTPMAVANPREVPE
YELNPLELQIRKSDGISKASVLCFVNQRCDVSIMGSYQVAKWNGTKVSVKILDKDSYKDP
ESINAFKHELTLLEKVRHPNVVQFVGAVTQNIPMMIVSEYHPRGDLGSYLQKKGRISPSK
ALKYALDVARQVVLCHKSEMICGNTSTLWGMNYLHECKPDPIIHCNLNPKNILLDDGDHL
KVAGFGLIKLSKISPDKAKLVQPEGFDRSSPYVAPEIYKDEIFDRNADIYSFGILLYEML
EGTPPFNTKSPEETARLMCLEGQRPVFKSKSKYPPELRELIEECWDPEAFVRPTFSEVVS
VHEGVKKMDNNWGQWSLSAEDSCGAFN*

Transcript Sequence

Transcript ID

Solyc12g019410.2.1
Transcript Infomation

Integrin-linked protein kinase family (AHRD V3.3 *** AT2G43850.3)
Sequence

GTCATTTCATTTTCAACTCTTGTAATGTCTTTCTACTCCTTTTATCAACAGTGAATTTAT
TGTAAACAACCCCTTTCATGTCTTTTTTTCATTTGTCTTTTTGTTTTTCTCTCAAATTGG
CGGGTTGTGTTTTTTTTAAAAAAAAAAAGATTTGGGAGTTGTTCGTTTTTCAATCATATG
TTAATTCCTGGATAAATTAGAAGTGGATTTCTAATTTGTATTCAAATACAGATTTATGCT
ACAGTAGAATTGAATTGGTCAAATGCTCAAATCACATAATAATTGTGTATAAGAAATAGA
TTTTTGTTTGCTGGAGAGAAGTTGTTGAAATGAAGAAGTTAAAGAAAGGAATATCGAGGC
AATTCTCAACAGAGTTGTTTAGGAAGAGTGGAAAATTCAGTTTCAAGAGGCAGAGTTCAT
TGGATCCAAGGAGGAACAATTTGCGGTTTAGTTTTGGGAGGCAATCATCGCTTGATCCGC
TTCGAAGGAGCCCTTCGATAGAAAATGCTGAGAGAACTGTGCCAGAGAATCTTGATTCGA
CGATGCAGCTGTTATTCATGGCGTGTAAAGGGGACGTGAAGGGAGTTCAGGACTTGTTGG
ATGAAGGTATTGATGTGAATAGCATTGATTTGGATGGAAGGACTGCTCTTCATATTGCTG
CCTGTGAAGGTCACGTGGAAGTTGCCAAGCTATTGTTGAGTAGGAAGGCTAATATGAATG
CTCGTGATCGGTGGGGTAGTACGGCAGCAGCTGATGCCAAACATTATGGTAATGCTGAAG
TTTACGAAATGTTGAAGGCCCGTGGAGCCAAAGTCCCGAAAGTCGGAAAGACGCCAATGG
CTGTAGCAAATCCACGAGAAGTTCCAGAATATGAACTAAACCCTCTGGAGCTTCAAATCC
GCAAAAGTGATGGAATCTCAAAGGCAAGTGTTCTATGTTTTGTTAATCAGCGCTGTGATG
TTTCAATTATGGGTTCATATCAAGTTGCCAAATGGAATGGAACGAAAGTTTCCGTAAAAA
TACTTGACAAGGATAGCTATAAAGATCCTGAAAGCATAAATGCTTTCAAACATGAATTAA
CTTTGCTAGAAAAAGTGCGGCATCCAAATGTAGTTCAGTTTGTTGGAGCAGTTACACAAA
ATATACCAATGATGATAGTGTCAGAGTATCATCCAAGGGGTGATCTAGGTAGCTATCTTC
AGAAAAAGGGACGTATATCTCCTTCTAAGGCGCTTAAATATGCTCTTGATGTTGCTAGGC
AAGTCGTTCTTTGTCATAAAAGTGAAATGATCTGTGGCAATACCTCTACTCTTTGGGGTA
TGAACTACCTTCACGAGTGCAAACCAGACCCAATTATACATTGCAATCTAAATCCAAAAA
ATATTTTGCTTGACGATGGAGATCACCTGAAAGTTGCTGGATTTGGTCTTATTAAATTGT
CAAAAATTTCACCTGACAAAGCAAAGTTGGTGCAGCCGGAGGGTTTTGACCGTTCAAGTC
CCTATGTAGCACCTGAGATTTATAAAGATGAAATATTTGACCGGAATGCGGACATATATT
CATTTGGCATTTTACTCTATGAGATGCTGGAGGGAACACCACCTTTTAATACCAAGTCTC
CAGAAGAGACTGCCAGGTTGATGTGCTTAGAAGGCCAGAGACCAGTATTCAAATCGAAAT
CCAAATATCCTCCTGAGCTTAGAGAGTTGATTGAAGAATGTTGGGATCCAGAAGCTTTTG
TCCGGCCAACATTTTCTGAGGTTGTAAGTGTACATGAAGGTGTCAAGAAGATGGACAATA
ATTGGGGTCAATGGAGTTTATCAGCGGAAGATTCATGTGGAGCTTTCAATTGATGATAAA
CCTAATAGGCAAACTTGTAGTCACAAGATTCCTTGAAAGCTTTATATTGTCGTTAAACCT
AATAAAAGGCAGATTTGCAGGGTGTATGAGATGGGATTACAATTAAATGTTGGCTTCATA
GTAAGTTTGAACTTATATGTCATGTGAAGTTTGTTTATATTATATCTAAAGTTTTTGAAC
CAAATGTATTTCGTCATACAAGGGGGAAAACAAAAGGGTTATATAATAAAGGACTGGATA
TCATATACATTACTTTATTATAATAGTGCTTATTGTAAGTGAATTTTTATTTCGTTAAAA
CTTAAATGTGGATCCCACAAAATTGCCACATGGCAGACACCATCTCCAAAAATCTTCTTT
CTTCTGCTGCATTTTTCAATTGGTTTATTCTTCTCTCCGTCACTTTCTTCTTCAATCTCA
TTTGAACCAAATTTACCAAAAAAAATAATTCGGAACACAAAAATCTCTTCAAATTTCAAA
TAATATTTTAAGATGAGTATATTTTCCACCTTTATCCATTCTATTTTCACCATTTAGGAG
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