Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g017880.2.1
CDS Infomation

Auxin induced-like protein (AHRD V3.3 *** E0Z5V0_PICSI)
Sequence

ATGATGTTATTAGTCATTTTATCATTTTTATCGATATTTTCTTTCACAAATACTCATGCT
CATCATTGTAGTAATGATTTCTTGTCCGAGGCGAAGAATAGAAGTCTAATCAACATAACA
TTTTGCAAGAGATACACGGAAAGCAATGGAGTTGAAGTAGCCATACATCTACACGAAAAC
ACTCGAAAAATTGATATAATGGTGGGAGCTAAGTTAAAAGAAGAAGAAGAAACAGGATGG
CTAGCATGGGGTTTGAATCCTGGTGAAGAAGCTAGAATGATTGGAACACAAGCTCTTATA
GGTATAAAGACTAAGAATAAAGGGCTACTTAAGGATACATACAATATTACTGGTTATACA
AAGTTAGGTTGTCAATTATTGCCTTCTCCTATTGACTTAAACATAAGTAATTTCAAATTT
ATTCATATTACTGAACTTGAATATCATGTTATATTAGCAACTATTATTCTTCCAAATCAA
TACGATTTGTCAAGGCTGAATCAAGTGTGGCAAGTTGGAATTAATATTGGGGCAGTAGAG
ACTAAAGAACTAAAGATGCATGGTAAAGGCCTCATGAATTATGATAGTAGTGAAACAATT
AACTTGAGGACAGGCAAAGGTCGAGGCAATAGAATTCATAAATCTAGCAAAATAAGAAAA
GTTCATGGGATATTAAATATTATTGGGTGGGGTGTAGTGCTTCCTATTGGTGTGATTATA
GCAAGGAATTTTAGAGAGTTTCCATTACCTTGGTTGGGTTGGAAAAAATGTCATATTTCA
TGCCAAACAATTGGGTACCTTGTGGGAACAACAGGATGGGCTGTTGGAATATGGCTTGGT
AAAGCATCAAAATATTATTCCTTTCCCAAACATGGAACTTATGGCCTTTTAATATTTGCT
TTTGCCACTATACAAATGCTGTTTTTCAAACTTAAACCGGGCGAAAGCGACAAATATCGT
ATGTATAGGAACATGTTTCATCATGTTGTTGGATATTCATTAATGATTGGGATCTGTATC
AACATATTGAAAGGGATACATATAATACATCTGGACTACACATCCTGGAAACCAACTTAT
TTAGGAATAGTTAGTTGTTTGGCTTTCATCTTTCTTGTTTTTGAAATAGTATCTTGGTTC
AAATTTTTGTGTGATAAGTTTGGGCTTTGGATCTTATGTGCCAAATGCATACCAAATAAG
GAATCAAATGAGAAAAAAGGTTCAAAAAAAGATGGAAAAGCTCAATCACAAGTTCAACCT
AGTGAAACACCAATAAGAGCTGATAATTAA

Peptide Sequence

PEP ID

Solyc12g017880.2.1
PEP Infomation

Auxin induced-like protein (AHRD V3.3 *** E0Z5V0_PICSI)
Sequence

MMLLVILSFLSIFSFTNTHAHHCSNDFLSEAKNRSLINITFCKRYTESNGVEVAIHLHEN
TRKIDIMVGAKLKEEEETGWLAWGLNPGEEARMIGTQALIGIKTKNKGLLKDTYNITGYT
KLGCQLLPSPIDLNISNFKFIHITELEYHVILATIILPNQYDLSRLNQVWQVGINIGAVE
TKELKMHGKGLMNYDSSETINLRTGKGRGNRIHKSSKIRKVHGILNIIGWGVVLPIGVII
ARNFREFPLPWLGWKKCHISCQTIGYLVGTTGWAVGIWLGKASKYYSFPKHGTYGLLIFA
FATIQMLFFKLKPGESDKYRMYRNMFHHVVGYSLMIGICINILKGIHIIHLDYTSWKPTY
LGIVSCLAFIFLVFEIVSWFKFLCDKFGLWILCAKCIPNKESNEKKGSKKDGKAQSQVQP
SETPIRADN*

Transcript Sequence

Transcript ID

Solyc12g017880.2.1
Transcript Infomation

Auxin induced-like protein (AHRD V3.3 *** E0Z5V0_PICSI)
Sequence

TGATAGAAACATCACGACCACCATCTTTCTCTATGATGTTATTAGTCATTTTATCATTTT
TATCGATATTTTCTTTCACAAATACTCATGCTCATCATTGTAGTAATGATTTCTTGTCCG
AGGCGAAGAATAGAAGTCTAATCAACATAACATTTTGCAAGAGATACACGGAAAGCAATG
GAGTTGAAGTAGCCATACATCTACACGAAAACACTCGAAAAATTGATATAATGGTGGGAG
CTAAGTTAAAAGAAGAAGAAGAAACAGGATGGCTAGCATGGGGTTTGAATCCTGGTGAAG
AAGCTAGAATGATTGGAACACAAGCTCTTATAGGTATAAAGACTAAGAATAAAGGGCTAC
TTAAGGATACATACAATATTACTGGTTATACAAAGTTAGGTTGTCAATTATTGCCTTCTC
CTATTGACTTAAACATAAGTAATTTCAAATTTATTCATATTACTGAACTTGAATATCATG
TTATATTAGCAACTATTATTCTTCCAAATCAATACGATTTGTCAAGGCTGAATCAAGTGT
GGCAAGTTGGAATTAATATTGGGGCAGTAGAGACTAAAGAACTAAAGATGCATGGTAAAG
GCCTCATGAATTATGATAGTAGTGAAACAATTAACTTGAGGACAGGCAAAGGTCGAGGCA
ATAGAATTCATAAATCTAGCAAAATAAGAAAAGTTCATGGGATATTAAATATTATTGGGT
GGGGTGTAGTGCTTCCTATTGGTGTGATTATAGCAAGGAATTTTAGAGAGTTTCCATTAC
CTTGGTTGGGTTGGAAAAAATGTCATATTTCATGCCAAACAATTGGGTACCTTGTGGGAA
CAACAGGATGGGCTGTTGGAATATGGCTTGGTAAAGCATCAAAATATTATTCCTTTCCCA
AACATGGAACTTATGGCCTTTTAATATTTGCTTTTGCCACTATACAAATGCTGTTTTTCA
AACTTAAACCGGGCGAAAGCGACAAATATCGTATGTATAGGAACATGTTTCATCATGTTG
TTGGATATTCATTAATGATTGGGATCTGTATCAACATATTGAAAGGGATACATATAATAC
ATCTGGACTACACATCCTGGAAACCAACTTATTTAGGAATAGTTAGTTGTTTGGCTTTCA
TCTTTCTTGTTTTTGAAATAGTATCTTGGTTCAAATTTTTGTGTGATAAGTTTGGGCTTT
GGATCTTATGTGCCAAATGCATACCAAATAAGGAATCAAATGAGAAAAAAGGTTCAAAAA
AAGATGGAAAAGCTCAATCACAAGTTCAACCTAGTGAAACACCAATAAGAGCTGATAATT
AATTGCTACTATGTTTTGTTCAATTGTAAGTTTGTGTTAGAAGGTTATTTTACATCTTTT
TGTGGTAGAATGTAGAGGCATATTTGGGATTTCTGAAGGATTGTATTCTACTATCGTTTT
ATATTTTCCTTTTTTAATTTTTTGTATTCGATATTTGATACTCGTTGAAGCTTGATTTAA
TCTACTATCAACATTGTTGTCACAAATATACGTTATC