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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g017690.2.1
CDS Infomation

Queuine tRNA-ribosyltransferase accessory subunit 2 (AHRD V3.3 *** K4DD97_SOLLC)
Sequence

ATGGAGTACAGTTCCTTGCTTGATCAGTGCAATCTGGAAGACCCAGATCTCTTGGAAGGC
ATTTCCCTGAAAGCAATCTCAAACATTGGAGGGCTGCACCCATTGCTAGGGTTACATGAT
CATATAATGGTAGCTGTGCCAAGGGATTCTATTATATCTATTCCAGATCATGATAGTACT
AACAGGATCGGAGCTTCCTTTGAAACTCCTTGTGGTCGTATGTTGATTAAGCCTGCAGAT
TACATGGAAATGATTTCATCAATGCGGCCAAATTTGTGGGCCACTTTAGCTGATGAAGTT
CCTGCTTGGGTTTCTGAAAAGAGGAACAAAGCCTCAGTTGAACGTACGTTGAAATGGCTT
GACGAATGCATCACTTCAAACTCGGAGGGTAGTTCGTCTGTTGCCTTGACAGAAGGAGCA
GTGCTTGGATCCATTGTTGGAGGCTCTAGGGTGGAGCAGCGGCAAAGTTGTGCTCAAGAA
GTTGCTAGGAGGAATGTAGAAGGTTTTTGGATTGGGGGATTTGGATTAGGGGAGAGCATG
GAAGAGCGTAACCCCCTCCTTAATGCTGTTATGGATAGTTTACCTGAAGAAAAGCCACGT
CTCATAAGTGGCCTTGGACTACCAGGCAAGATGCTTCTGTCACTCATTCAATTGGATTTA
CTTGTTTTCTCTACAGAAGAGGTCTTGCAAGGTGTTGCTGCAGGTGTTGATTTATTTGAT
TCCACTTACATCTACGATCTCACACTAGGAGGCTTTGCTCTCACCTTTCCACTTGAAAGC
ATAGAGAAGCAAGTTACTAAATATCAACCAAATAGTAATTCAGGATGTGATGGCACAAAG
ATAAATTTGAAAGCAACATTGTATAGGAAGGATACATCTCCTATCGTCGATGATTGCAAG
TGTTATACATGCCAAAATCATACAAAAGCTTACATCAATCACCTTCTCAATGTACATGAA
ATGCTGGCACATATTCTGCTGGAAATGCATAACACACATCATTTTCTGGGATTCTTCCGC
TCTATCAGAGAGGCGATTCACCAAGGAAATTTCCAGCAATTTCGACAGAAATTCATAGGA
AATAGGCATGAACATCTCTTTTCTGCTGCTTTAAGCGTCTAA

Peptide Sequence

PEP ID

Solyc12g017690.2.1
PEP Infomation

Queuine tRNA-ribosyltransferase accessory subunit 2 (AHRD V3.3 *** K4DD97_SOLLC)
Sequence

MEYSSLLDQCNLEDPDLLEGISLKAISNIGGLHPLLGLHDHIMVAVPRDSIISIPDHDST
NRIGASFETPCGRMLIKPADYMEMISSMRPNLWATLADEVPAWVSEKRNKASVERTLKWL
DECITSNSEGSSSVALTEGAVLGSIVGGSRVEQRQSCAQEVARRNVEGFWIGGFGLGESM
EERNPLLNAVMDSLPEEKPRLISGLGLPGKMLLSLIQLDLLVFSTEEVLQGVAAGVDLFD
STYIYDLTLGGFALTFPLESIEKQVTKYQPNSNSGCDGTKINLKATLYRKDTSPIVDDCK
CYTCQNHTKAYINHLLNVHEMLAHILLEMHNTHHFLGFFRSIREAIHQGNFQQFRQKFIG
NRHEHLFSAALSV*

Transcript Sequence

Transcript ID

Solyc12g017690.2.1
Transcript Infomation

Queuine tRNA-ribosyltransferase accessory subunit 2 (AHRD V3.3 *** K4DD97_SOLLC)
Sequence

ATGGAGTACAGTTCCTTGCTTGATCAGTGCAATCTGGAAGACCCAGATCTCTTGGAAGGC
ATTTCCCTGAAAGCAATCTCAAACATTGGAGGGCTGCACCCATTGCTAGGGTTACATGAT
CATATAATGGTAGCTGTGCCAAGGGATTCTATTATATCTATTCCAGATCATGATAGTACT
AACAGGATCGGAGCTTCCTTTGAAACTCCTTGTGGTCGTATGTTGATTAAGCCTGCAGAT
TACATGGAAATGATTTCATCAATGCGGCCAAATTTGTGGGCCACTTTAGCTGATGAAGTT
CCTGCTTGGGTTTCTGAAAAGAGGAACAAAGCCTCAGTTGAACGTACGTTGAAATGGCTT
GACGAATGCATCACTTCAAACTCGGAGGGTAGTTCGTCTGTTGCCTTGACAGAAGGAGCA
GTGCTTGGATCCATTGTTGGAGGCTCTAGGGTGGAGCAGCGGCAAAGTTGTGCTCAAGAA
GTTGCTAGGAGGAATGTAGAAGGTTTTTGGATTGGGGGATTTGGATTAGGGGAGAGCATG
GAAGAGCGTAACCCCCTCCTTAATGCTGTTATGGATAGTTTACCTGAAGAAAAGCCACGT
CTCATAAGTGGCCTTGGACTACCAGGCAAGATGCTTCTGTCACTCATTCAATTGGATTTA
CTTGTTTTCTCTACAGAAGAGGTCTTGCAAGGTGTTGCTGCAGGTGTTGATTTATTTGAT
TCCACTTACATCTACGATCTCACACTAGGAGGCTTTGCTCTCACCTTTCCACTTGAAAGC
ATAGAGAAGCAAGTTACTAAATATCAACCAAATAGTAATTCAGGATGTGATGGCACAAAG
ATAAATTTGAAAGCAACATTGTATAGGAAGGATACATCTCCTATCGTCGATGATTGCAAG
TGTTATACATGCCAAAATCATACAAAAGCTTACATCAATCACCTTCTCAATGTACATGAA
ATGCTGGCACATATTCTGCTGGAAATGCATAACACACATCATTTTCTGGGATTCTTCCGC
TCTATCAGAGAGGCGATTCACCAAGGAAATTTCCAGCAATTTCGACAGAAATTCATAGGA
AATAGGCATGAACATCTCTTTTCTGCTGCTTTAAGCGTCTAACTTGATATTTCTGTGCAA
GAGGTTATATTTAAATCACAGCTTTAAGAGTTTTTTTTTTTCCATTATCTTTTCATATGC
CCCGATTGCTTAGCTTTTACTTAGCTATTTTACTGCATGAAAGGTAATCTTACATTTTTA
AATGATGATCATATCATCATAT