Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc12g017630.2.1
CDS Infomation	Ribosomal RNA small subunit methyltransferase NEP1 (AHRD V3.3 *** A0A0B2PCU7_GLYSO)
Sequence	ATGGTGCGTGCATACAAAGTAAAAGGGGAGAAAAGAAAAAAGAAAGGAGAGAATTATGAT AAAGAAGAAGAAATTGAGGTACCTTTGGAAGAGGAGGAATCAACAAAAAGAGTGAAGACA GAACACTCTGAGGCAGACACCGAGGCAGCTGAAAGAGTTGTAGATTTACTATCTGGCATT CCTGTTGTTGCAACTGATCAAACCAATAAACCTGGTGTTGTTTTCATCATTGAAAGAGCT TCTCTTGAAATTGCTAAAATTGGAAAGACGTACCAACTTCTGAATTCTGATGAACACTCC AACTTTCTGAAGAAGAATGGCCGGAACCCTTCTGATTATCGGCCTGATATTGCGCATCAG GCAATGCTTTCAATTTTAGATAGCCGAGTAAATAAAGCTGGGCGACTGAAAGCTTTGTAT GTGAGGACTGAGAAAGGTGTCCTTTTTGAAGTAAAACCTCATGTTCGTATCCCTAGGACT TTTAAGAGATTTTCTGGCATCATGTTGCAGCTGCTACAAAAGCTGAGCATAACTGCTGTT GGTAAGCGAGAGAAACTGTTGCGTGTTATAAAAAACCCTGTTACACAGTACCTACCCATC GACTGTCGGAAGATAGGCTTCTCTCATAGTTCTGAGAAGCTGGTGGATATTCAGGACTAT GTTAATGGCGTCAACAATGACATGAACCTTGTCTTTGTGGTTGGGGCTATGGCCCATGGG AAAATTGATAAAGATTATGTTGAAGATTATTTATCAATTTCAGATTATCCATTGAGTGCT GCATACTGCATATCAATGATCACGAATGCCATGGAGCGCAAATGGAAGATTTTGTAG

Peptide Sequence

PEP ID	Solyc12g017630.2.1
PEP Infomation	Ribosomal RNA small subunit methyltransferase NEP1 (AHRD V3.3 *** A0A0B2PCU7_GLYSO)
Sequence	MVRAYKVKGEKRKKKGENYDKEEEIEVPLEEEESTKRVKTEHSEADTEAAERVVDLLSGI PVVATDQTNKPGVVFIIERASLEIAKIGKTYQLLNSDEHSNFLKKNGRNPSDYRPDIAHQ AMLSILDSRVNKAGRLKALYVRTEKGVLFEVKPHVRIPRTFKRFSGIMLQLLQKLSITAV GKREKLLRVIKNPVTQYLPIDCRKIGFSHSSEKLVDIQDYVNGVNNDMNLVFVVGAMAHG KIDKDYVEDYLSISDYPLSAAYCISMITNAMERKWKIL*

Transcript Sequence

Transcript ID	Solyc12g017630.2.1
Transcript Infomation	Ribosomal RNA small subunit methyltransferase NEP1 (AHRD V3.3 *** A0A0B2PCU7_GLYSO)
Sequence	ACACTTTCTTTTAAAAAAAATGATAAACTCAAAACCCTAAAGTTATTTTTCCCGCTCCAA GCCTCTCTAACTTCTCCCTCACGCTCGACCCAACCTCAACCGCCGCTCACCACCAATTCG CGACCGGCGATGCAGCAGTAGGTCGCGCCACTATACCCGACCGACCGCCGCGCCGCCTCG ATTTACAGCAACAGGTCGCAGCAGCAGCAGAGCGTAGCTGGCAGCTGCAATCTCCGGCAA CAGCTACAAACAGAAGGATTATACATCAAAACTCACTTGGCAGCATCAAACTCCGGCAGT GACATACCGAGATACTTTTACGTGTGACAAAAATGGTGCGTGCATACAAAGTAAAAGGGG AGAAAAGAAAAAAGAAAGGAGAGAATTATGATAAAGAAGAAGAAATTGAGGTACCTTTGG AAGAGGAGGAATCAACAAAAAGAGTGAAGACAGAACACTCTGAGGCAGACACCGAGGCAG CTGAAAGAGTTGTAGATTTACTATCTGGCATTCCTGTTGTTGCAACTGATCAAACCAATA AACCTGGTGTTGTTTTCATCATTGAAAGAGCTTCTCTTGAAATTGCTAAAATTGGAAAGA CGTACCAACTTCTGAATTCTGATGAACACTCCAACTTTCTGAAGAAGAATGGCCGGAACC CTTCTGATTATCGGCCTGATATTGCGCATCAGGCAATGCTTTCAATTTTAGATAGCCGAG TAAATAAAGCTGGGCGACTGAAAGCTTTGTATGTGAGGACTGAGAAAGGTGTCCTTTTTG AAGTAAAACCTCATGTTCGTATCCCTAGGACTTTTAAGAGATTTTCTGGCATCATGTTGC AGCTGCTACAAAAGCTGAGCATAACTGCTGTTGGTAAGCGAGAGAAACTGTTGCGTGTTA TAAAAAACCCTGTTACACAGTACCTACCCATCGACTGTCGGAAGATAGGCTTCTCTCATA GTTCTGAGAAGCTGGTGGATATTCAGGACTATGTTAATGGCGTCAACAATGACATGAACC TTGTCTTTGTGGTTGGGGCTATGGCCCATGGGAAAATTGATAAAGATTATGTTGAAGATT ATTTATCAATTTCAGATTATCCATTGAGTGCTGCATACTGCATATCAATGATCACGAATG CCATGGAGCGCAAATGGAAGATTTTGTAGACCGACCTTAGCTATATTCTCCCAAGACATA CTTTGTAGAAAGTTGTCCTTGCTAGTTTTCTTTCTATAGGCCTTTTTGGGTCGTTAAGTT GTGTAAAGGGCAAATGACCCTCACATTTTGGAGTGCCCTTTTTGCTCGTTTACGATCAGT TTAAAACATTTTGCAGACTTATTGATCGTATAAAGTGAAATTTTGATTATCGGAATCTCC CTTCGTGCAGAGGCCAACATTGACTATTCTTATATGAATTGTTAACAATGTTGGTTCTGC TTTGTTTT