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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g016190.2.1
CDS Infomation

High mobility group family (AHRD V3.3 *** A0A061F3D5_THECC)
Sequence

ATGTCTAACAATCCGCCACCGTCGTCGCAGTTACCGCCGCCGCTGCCGCTGCCGCTGCTA
GGTTACCCAGGAGGAACTCTCTCTTACCCTAAGCCGGAAGCTGAATACCATGAAATTGTT
CAAAATTCCCAACTTTTCTGGAACAAACTTCAGAAATTCTCCGCATCACTGCAAACCAAG
TTCCAGATCCCTCTTGTAGCAGGAACACCACTAGATTTACACCGTCTTTTTGTGGAGGTT
ACATCTCGAGGTGGAATAGAAAAGGTTATTAGAGAGAGAAAATGGGGGGAGGTGAAAGGA
ATATTCAGATTTCCATCTTCTGTGACCAATGCTTCATTTGTCTTGCGGAAACACTATCTA
TCCATGCTTTATCATTTTGAGCAGGTTTATTACTTTAGGAAAGAAGAGCCTTCTATTTCT
GTGTCTGATCCTACAAGTAGAAATGTCAGTGGCTCTGCAACTGAACATGCTAATGATGAT
AGTGCTGCTACGGATCAAAGTTCAGTGAGCTATAATCTGGAGGATGGGAATTCACTGGTA
GGAACAATTGATGCGAAGTTTGATTACGGTTATGTAATCTCTGTGAACCTGGGCTCGGAG
AATTTAAATGGTGTACTGTATCATATACCTGCATTACCAAATCAATTCCAAAAGGTGAAT
ACTTTGGCTACACCTTCCCAAAGGATTAGGAAAAGACAGTTGGCTTTGAAGGACCCCTCT
CGACCCAAGCCAAATCGAAGTGGTTATAATTTTTTCTTTGCTGAGCATTATGCAACGTTG
AAGCCTTCATATCAGGGGCAAGAGAGAGCTATCAGCAAAAGGATTGGAATTCTTTGGAGT
CGACTCACAGAGGCCGAAAAACAGGTTTATCAGGAAAAAGGTGCGAGAGATAAGGAGAGG
TACAGGGCTGAGATGCTGGAATACCAGACATCCAATGTACAACCATCATAA

Peptide Sequence

PEP ID

Solyc12g016190.2.1
PEP Infomation

High mobility group family (AHRD V3.3 *** A0A061F3D5_THECC)
Sequence

MSNNPPPSSQLPPPLPLPLLGYPGGTLSYPKPEAEYHEIVQNSQLFWNKLQKFSASLQTK
FQIPLVAGTPLDLHRLFVEVTSRGGIEKVIRERKWGEVKGIFRFPSSVTNASFVLRKHYL
SMLYHFEQVYYFRKEEPSISVSDPTSRNVSGSATEHANDDSAATDQSSVSYNLEDGNSLV
GTIDAKFDYGYVISVNLGSENLNGVLYHIPALPNQFQKVNTLATPSQRIRKRQLALKDPS
RPKPNRSGYNFFFAEHYATLKPSYQGQERAISKRIGILWSRLTEAEKQVYQEKGARDKER
YRAEMLEYQTSNVQPS*

Transcript Sequence

Transcript ID

Solyc12g016190.2.1
Transcript Infomation

High mobility group family (AHRD V3.3 *** A0A061F3D5_THECC)
Sequence

ATGTCTAACAATCCGCCACCGTCGTCGCAGTTACCGCCGCCGCTGCCGCTGCCGCTGCTA
GGTTACCCAGGAGGAACTCTCTCTTACCCTAAGCCGGAAGCTGAATACCATGAAATTGTT
CAAAATTCCCAACTTTTCTGGAACAAACTTCAGAAATTCTCCGCATCACTGCAAACCAAG
TTCCAGATCCCTCTTGTAGCAGGAACACCACTAGATTTACACCGTCTTTTTGTGGAGGTT
ACATCTCGAGGTGGAATAGAAAAGGTTATTAGAGAGAGAAAATGGGGGGAGGTGAAAGGA
ATATTCAGATTTCCATCTTCTGTGACCAATGCTTCATTTGTCTTGCGGAAACACTATCTA
TCCATGCTTTATCATTTTGAGCAGGTTTATTACTTTAGGAAAGAAGAGCCTTCTATTTCT
GTGTCTGATCCTACAAGTAGAAATGTCAGTGGCTCTGCAACTGAACATGCTAATGATGAT
AGTGCTGCTACGGATCAAAGTTCAGTGAGCTATAATCTGGAGGATGGGAATTCACTGGTA
GGAACAATTGATGCGAAGTTTGATTACGGTTATGTAATCTCTGTGAACCTGGGCTCGGAG
AATTTAAATGGTGTACTGTATCATATACCTGCATTACCAAATCAATTCCAAAAGGTGAAT
ACTTTGGCTACACCTTCCCAAAGGATTAGGAAAAGACAGTTGGCTTTGAAGGACCCCTCT
CGACCCAAGCCAAATCGAAGTGGTTATAATTTTTTCTTTGCTGAGCATTATGCAACGTTG
AAGCCTTCATATCAGGGGCAAGAGAGAGCTATCAGCAAAAGGATTGGAATTCTTTGGAGT
CGACTCACAGAGGCCGAAAAACAGGTTTATCAGGAAAAAGGTGCGAGAGATAAGGAGAGG
TACAGGGCTGAGATGCTGGAATACCAGACATCCAATGTACAACCATCATAAACTGATATT
GTAGGACATCTTTGTTTCCACATCTTTCGTTTTTGTTTGGAAATCATCAATATTATCATA
GACAGGATTTAACTTTGATGAATTTGTGAAACTGTTGGGCTCGCGCGCCCTTTTATTTTC
TGGGAGTTAGAAAGATGCTTTGGAACAAGATTGGTATCAATGATGTTCCATCTCAGTTTC
CTTATGTCAATATAATGTGTTTAAATTAGATATTCTGCTCATTTAGGCAATATGT