Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g015900.1.1
CDS Infomation

LOW QUALITY:DUF868 family protein (DUF868) (AHRD V3.3 *** AT2G04220.1)
Sequence

ATGTTCAAATCATCATTAGAATCTGAAGCTTCTATGAATCAGAAACAATTGGAAGATGAG
AAGCAAACTGAAGAAACTATTGTCAATAAATTTGGAGAGGATTTTACAACTTGCATTTAT
GTTGCCAAAATTGCACATATTTTCCATGCCATAACTACAACATGGTCCAAAAACATGACT
AGCCATACCCTTGATATCATAGTGGAACACCTTTCTGAAGAAAGACATTTCACATGTAAA
ATTGACCTAAAATCTTGGCAATTTTGGGGTAAGAAAGGTTTGAAATCATTCAGAGTGGGT
GAGAAGCGCACGGACATCTACTGGGATTTGAGATCAGCCAAATTCTCAACCAGACCAGAG
CCTGTATCAGATTATTACGTGGCATTGGTCTCAGAAGGGGATATGGTATTATTAATAGGC
GATCAAAATAAAGAAGCATTCAAGAGAACAAAATCACTACCAGCCATGCTAGATGCTTCA
TTATTACACAAAAAGGAAACTATATATGCGAAAAAATGCTTTTGCACAAGAACAATGTTA
GGGCAAGGGAAAAAACAACATGATATTACTATTGAATCTGTCCTTTCAGGTCCATCTGAT
CCTGCTATGCAAATCAGTGTGAATGGAACTGTAGCAATTCGGATCGCGAATTTGCATTGG
AGATTTAGGGGAAATGAGAAGGTTTTTTTGGATAATGTACCTGTTGAGATCTTCTGGGAT
GTGCATGATTGGTTATATAGTGGTCCTAACTATGGTCCTGGATCTTTCATTTTCAAGCAA
GGAAAATTGGAAGAGAGATATTCAGACTCTGAAACCAATATCAATGATGAAAATTGTGAT
TTGCAATCTCCATGTACAGAATTTTGTCATTTTCTTTATGCATGGAAGACTGAATAA

Peptide Sequence

PEP ID

Solyc12g015900.1.1
PEP Infomation

LOW QUALITY:DUF868 family protein (DUF868) (AHRD V3.3 *** AT2G04220.1)
Sequence

MFKSSLESEASMNQKQLEDEKQTEETIVNKFGEDFTTCIYVAKIAHIFHAITTTWSKNMT
SHTLDIIVEHLSEERHFTCKIDLKSWQFWGKKGLKSFRVGEKRTDIYWDLRSAKFSTRPE
PVSDYYVALVSEGDMVLLIGDQNKEAFKRTKSLPAMLDASLLHKKETIYAKKCFCTRTML
GQGKKQHDITIESVLSGPSDPAMQISVNGTVAIRIANLHWRFRGNEKVFLDNVPVEIFWD
VHDWLYSGPNYGPGSFIFKQGKLEERYSDSETNINDENCDLQSPCTEFCHFLYAWKTE*

Transcript Sequence

Transcript ID

Solyc12g015900.1.1
Transcript Infomation

LOW QUALITY:DUF868 family protein (DUF868) (AHRD V3.3 *** AT2G04220.1)
Sequence

ATGTTCAAATCATCATTAGAATCTGAAGCTTCTATGAATCAGAAACAATTGGAAGATGAG
AAGCAAACTGAAGAAACTATTGTCAATAAATTTGGAGAGGATTTTACAACTTGCATTTAT
GTTGCCAAAATTGCACATATTTTCCATGCCATAACTACAACATGGTCCAAAAACATGACT
AGCCATACCCTTGATATCATAGTGGAACACCTTTCTGAAGAAAGACATTTCACATGTAAA
ATTGACCTAAAATCTTGGCAATTTTGGGGTAAGAAAGGTTTGAAATCATTCAGAGTGGGT
GAGAAGCGCACGGACATCTACTGGGATTTGAGATCAGCCAAATTCTCAACCAGACCAGAG
CCTGTATCAGATTATTACGTGGCATTGGTCTCAGAAGGGGATATGGTATTATTAATAGGC
GATCAAAATAAAGAAGCATTCAAGAGAACAAAATCACTACCAGCCATGCTAGATGCTTCA
TTATTACACAAAAAGGAAACTATATATGCGAAAAAATGCTTTTGCACAAGAACAATGTTA
GGGCAAGGGAAAAAACAACATGATATTACTATTGAATCTGTCCTTTCAGGTCCATCTGAT
CCTGCTATGCAAATCAGTGTGAATGGAACTGTAGCAATTCGGATCGCGAATTTGCATTGG
AGATTTAGGGGAAATGAGAAGGTTTTTTTGGATAATGTACCTGTTGAGATCTTCTGGGAT
GTGCATGATTGGTTATATAGTGGTCCTAACTATGGTCCTGGATCTTTCATTTTCAAGCAA
GGAAAATTGGAAGAGAGATATTCAGACTCTGAAACCAATATCAATGATGAAAATTGTGAT
TTGCAATCTCCATGTACAGAATTTTGTCATTTTCTTTATGCATGGAAGACTGAATAA