Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g015860.2.1
CDS Infomation

farnesyl pyrophosphate synthase
Sequence

ATGGCTGATCTGAAGAAGAAATTTTTGGATGTGTACTCTGTTCTTAAATCTGATCTGTTA
GAAGACACAGCTTTTGAATTTACAGATGATTCTCGTAAATGGGTCGACAAGATGCTGGAC
TACAATGTACCTGGAGGGAAGCTGAACCGAGGACTATCTGTTATTGACAGCCTTAGTTTG
TTGAAAGATGGAAAAGAATTAACCGCTGATGAAATCTTTAAAGCATCTGCTCTTGGCTGG
TGCATTGAATGGCTTCAAGCATACTTCCTTGTTCTTGATGATATAATGGATGGATCTCAT
ACACGTCGAGGTCAACCATGCTGGTACAACTTAGAAAAGGTTGGGATGATTGCTATTAAT
GATGGCATTCTTCTTCGCAACCACATCACCAGAATTCTGAAGAAGTACTTCAGGCCAGAG
TCTTATTATGTTGATCTTCTAGATTTGTTTAACGAGGTAGAGTTCCAGACTGCCTCTGGA
CAAATGATAGATTTGATCACAACACTTGTAGGAGAGAAAGATTTATCAAAGTACTCATTG
TCTATTCATCGCCGGATTGTCCAGTATAAAACTGCCTATTATTCATTTTACCTCCCAGTG
GCATGTGCACTTCTTATGGTAGGAGAGAATCTTGACAAGCATGTTGATGTCAAGAAAATT
CTTATTGACATGGGAATCTACTTTCAAGTTCAGGATGATTATCTGGACTGCTTTGCTGAC
CCAGAGGTGCTGGGCAAGATTGGCACTGATATTCAGGACTTTAAGTGCTCTTGGTTGGTA
GTTAAAGCTCTAGAACTATGCAACGAGGAGCAAAAGAAGATATTATTTGAGAACTATGGA
AAAGATAACGCTGCTTGTATTGCTAAAATAAAGGCACTCTATAATGATCTCAAACTTGAG
GAAGTATTTCTGGAATACGAGAAGACGTCCTATGAAAAATTGACCACTTCTATTGCAGCT
CATCCAAGCAAAGCAGTACAGGCAGTGCTGCTATCATTCTTGGGAAAGATTTATAAGAGG
CAGAAGTAG

Peptide Sequence

PEP ID

Solyc12g015860.2.1
PEP Infomation

farnesyl pyrophosphate synthase
Sequence

MADLKKKFLDVYSVLKSDLLEDTAFEFTDDSRKWVDKMLDYNVPGGKLNRGLSVIDSLSL
LKDGKELTADEIFKASALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWYNLEKVGMIAIN
DGILLRNHITRILKKYFRPESYYVDLLDLFNEVEFQTASGQMIDLITTLVGEKDLSKYSL
SIHRRIVQYKTAYYSFYLPVACALLMVGENLDKHVDVKKILIDMGIYFQVQDDYLDCFAD
PEVLGKIGTDIQDFKCSWLVVKALELCNEEQKKILFENYGKDNAACIAKIKALYNDLKLE
EVFLEYEKTSYEKLTTSIAAHPSKAVQAVLLSFLGKIYKRQK*

Transcript Sequence

Transcript ID

Solyc12g015860.2.1
Transcript Infomation

farnesyl pyrophosphate synthase
Sequence

GCTGGCGCCTGCTGTTGTTTTATGACTTAATAATAATTCATAAAAATACTGCGCTTGTTT
TTTTTTCCCCATATAAATAACAACTTCCTTAGTGCTTAACGAACCTCAGATCTCTTCCTT
CTCTGTTTATATATACATAAACTTTTTTTTTCTCTGTCAAAAATGGCTGATCTGAAGAAG
AAATTTTTGGATGTGTACTCTGTTCTTAAATCTGATCTGTTAGAAGACACAGCTTTTGAA
TTTACAGATGATTCTCGTAAATGGGTCGACAAGATGCTGGACTACAATGTACCTGGAGGG
AAGCTGAACCGAGGACTATCTGTTATTGACAGCCTTAGTTTGTTGAAAGATGGAAAAGAA
TTAACCGCTGATGAAATCTTTAAAGCATCTGCTCTTGGCTGGTGCATTGAATGGCTTCAA
GCATACTTCCTTGTTCTTGATGATATAATGGATGGATCTCATACACGTCGAGGTCAACCA
TGCTGGTACAACTTAGAAAAGGTTGGGATGATTGCTATTAATGATGGCATTCTTCTTCGC
AACCACATCACCAGAATTCTGAAGAAGTACTTCAGGCCAGAGTCTTATTATGTTGATCTT
CTAGATTTGTTTAACGAGGTAGAGTTCCAGACTGCCTCTGGACAAATGATAGATTTGATC
ACAACACTTGTAGGAGAGAAAGATTTATCAAAGTACTCATTGTCTATTCATCGCCGGATT
GTCCAGTATAAAACTGCCTATTATTCATTTTACCTCCCAGTGGCATGTGCACTTCTTATG
GTAGGAGAGAATCTTGACAAGCATGTTGATGTCAAGAAAATTCTTATTGACATGGGAATC
TACTTTCAAGTTCAGGATGATTATCTGGACTGCTTTGCTGACCCAGAGGTGCTGGGCAAG
ATTGGCACTGATATTCAGGACTTTAAGTGCTCTTGGTTGGTAGTTAAAGCTCTAGAACTA
TGCAACGAGGAGCAAAAGAAGATATTATTTGAGAACTATGGAAAAGATAACGCTGCTTGT
ATTGCTAAAATAAAGGCACTCTATAATGATCTCAAACTTGAGGAAGTATTTCTGGAATAC
GAGAAGACGTCCTATGAAAAATTGACCACTTCTATTGCAGCTCATCCAAGCAAAGCAGTA
CAGGCAGTGCTGCTATCATTCTTGGGAAAGATTTATAAGAGGCAGAAGTAGGATATAAAA
TAATGAATGAACTTCATTCTCCCATTGGGAATGAGATGTCTGTATTTCATGCATTTTTCT
GTTTTTTTTTCTTCTATTTTAGTTTGGAGTACTGATGATGGATTGTTATTTTTTTTCAAG
ACATGGAAACTCTTATCCTTTTTCACCTTTAATAAACAGTAGAAAAGTCCAATGAAATCT
TTCAGTATTCTGCTTTG