Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g015780.2.1
CDS Infomation

DNA-directed RNA polymerase family protein (AHRD V3.3 *** AT1G60850.4)
Sequence

ATGGGCACCGCAACAGAGAACGAGAGCATGGATTCCGAAGGCACATCAACACAAGAGGAG
ACCTTCACAAAGGTTTCAGTATGGGATTTGCCGGACTTGCCAAAGGGGAAGTTGCCTCCT
CACATTGAGCTTCAGAGGACTCGCGTTCTCTGTGGTTCTTTAGCTCCTACTAATACAGAG
AATGTAAATTATTCAGGTGCTTATGCGGCTATGGGTGTTGATAACAGTGTGCGGTTTGAG
CAATTTCGTGATAATTTCAAAGTGGAAATTGTGAGACTTGAGGAGGATGAATTGGAGTTT
GATATGATTGGTATTGATCCTTCTCTTGCCAATGCATTTCGCAGAATCCTTATTGCTGAG
CTTCCAACCATGGCTATTGAAAAAGTTCTTATTGCAAACAATACGTCCATCATCCAAGAT
GAAGTGCTTGCTCATAGGCTTGGTCTCATCCCAATTAAAGTCGATCCAAGGCTGTTTGAG
TATATGTCAGAAAATGATGTCCCTAATGAAAAGAATACAATTGTTTTCAAACTCCATGTC
CGTTGTACAAAAGGCAGTGATCGACTTAGAGTCTTGTCTAGTGAGCTGAAGTGGTTACCA
AATGGCAGTGAATTGATACTAGGAACAGAACATTCAGCATCAAGTTCGAGTGCGAAACCA
AAAACTTATACTTCATTCAGCTGTAGTCAGGATACTCGACCAGAATTCTCGGACGAACCA
ATTGCCCCAAAAGATGCAGATATTATTGTAGCCAAACTTGGACCGGGTCAGGAAATCGAG
CTAGAAGCTCATGCTGTTAAAGGAATGGGTAAGACACATGCAAAGTGGTCTCCTGTGGCT
ACGGCGTGGTACAGGATGCTTCCCGAGGTTTTATTATTGCGGGATATTGAAGATGATGAA
GCAGAAGCACTTGTGAAGAAGTGTCCGCTTAAGGTGTTTGACATCGAAGATATTGGTAAA
GGTAAAAAGAGGGCAACTGTTGCTCGACCAAGGGCTTGCACTCTCTGTAGGGAATGCATC
AGAGAGGAAGGTTGGGACAAGAATGTAGCACTGAGACGTGTAAATGATCATTTCATCTTT
ACCATAGAATCAACTGGAGCTTTGCCACCTGAGGTGCTGTTTACAGAAGCTGTAAAGATT
TTAGAAGAAAAATGTGAACGGGTGATAACGGAGCTGTCATGA

Peptide Sequence

PEP ID

Solyc12g015780.2.1
PEP Infomation

DNA-directed RNA polymerase family protein (AHRD V3.3 *** AT1G60850.4)
Sequence

MGTATENESMDSEGTSTQEETFTKVSVWDLPDLPKGKLPPHIELQRTRVLCGSLAPTNTE
NVNYSGAYAAMGVDNSVRFEQFRDNFKVEIVRLEEDELEFDMIGIDPSLANAFRRILIAE
LPTMAIEKVLIANNTSIIQDEVLAHRLGLIPIKVDPRLFEYMSENDVPNEKNTIVFKLHV
RCTKGSDRLRVLSSELKWLPNGSELILGTEHSASSSSAKPKTYTSFSCSQDTRPEFSDEP
IAPKDADIIVAKLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLRDIEDDE
AEALVKKCPLKVFDIEDIGKGKKRATVARPRACTLCRECIREEGWDKNVALRRVNDHFIF
TIESTGALPPEVLFTEAVKILEEKCERVITELS*

Transcript Sequence

Transcript ID

Solyc12g015780.2.1
Transcript Infomation

DNA-directed RNA polymerase family protein (AHRD V3.3 *** AT1G60850.4)
Sequence

TTTTTAATAGTTTAGGGCTTGACCCTTTTCCTTTCTTAAATTACAGGCGGAGATTCCCTG
TTTACTGGTAAGAACTTAAACCCTAAACCCTAATCATGGGCACCGCAACAGAGAACGAGA
GCATGGATTCCGAAGGCACATCAACACAAGAGGAGACCTTCACAAAGGTTTCAGTATGGG
ATTTGCCGGACTTGCCAAAGGGGAAGTTGCCTCCTCACATTGAGCTTCAGAGGACTCGCG
TTCTCTGTGGTTCTTTAGCTCCTACTAATACAGAGAATGTAAATTATTCAGGTGCTTATG
CGGCTATGGGTGTTGATAACAGTGTGCGGTTTGAGCAATTTCGTGATAATTTCAAAGTGG
AAATTGTGAGACTTGAGGAGGATGAATTGGAGTTTGATATGATTGGTATTGATCCTTCTC
TTGCCAATGCATTTCGCAGAATCCTTATTGCTGAGCTTCCAACCATGGCTATTGAAAAAG
TTCTTATTGCAAACAATACGTCCATCATCCAAGATGAAGTGCTTGCTCATAGGCTTGGTC
TCATCCCAATTAAAGTCGATCCAAGGCTGTTTGAGTATATGTCAGAAAATGATGTCCCTA
ATGAAAAGAATACAATTGTTTTCAAACTCCATGTCCGTTGTACAAAAGGCAGTGATCGAC
TTAGAGTCTTGTCTAGTGAGCTGAAGTGGTTACCAAATGGCAGTGAATTGATACTAGGAA
CAGAACATTCAGCATCAAGTTCGAGTGCGAAACCAAAAACTTATACTTCATTCAGCTGTA
GTCAGGATACTCGACCAGAATTCTCGGACGAACCAATTGCCCCAAAAGATGCAGATATTA
TTGTAGCCAAACTTGGACCGGGTCAGGAAATCGAGCTAGAAGCTCATGCTGTTAAAGGAA
TGGGTAAGACACATGCAAAGTGGTCTCCTGTGGCTACGGCGTGGTACAGGATGCTTCCCG
AGGTTTTATTATTGCGGGATATTGAAGATGATGAAGCAGAAGCACTTGTGAAGAAGTGTC
CGCTTAAGGTGTTTGACATCGAAGATATTGGTAAAGGTAAAAAGAGGGCAACTGTTGCTC
GACCAAGGGCTTGCACTCTCTGTAGGGAATGCATCAGAGAGGAAGGTTGGGACAAGAATG
TAGCACTGAGACGTGTAAATGATCATTTCATCTTTACCATAGAATCAACTGGAGCTTTGC
CACCTGAGGTGCTGTTTACAGAAGCTGTAAAGATTTTAGAAGAAAAATGTGAACGGGTGA
TAACGGAGCTGTCATGATCAGTCCTAAAGGGTAGTTAGATAGGTTATCCTTTCCAGAAAG
CCAAAGTAAGAGTTCAGCTTCGTTTCTCGTGTGTATG