Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g015660.2.1
CDS Infomation

DNA damage response protein WSS1 (AHRD V3.3 *** W9QFU6_9ROSA)
Sequence

ATGAATTTGGGCGATCTTAATAAGGTATGGGAAATCAAAGCTTTGAAGCGTAAACCGAAA
AATGAAGAAGCGAACAAGATTCTGGAGAAAATTGCTAAACAGGTTCAGCCCATTATGCGT
AAACATAACTGGAGAGTTAAACTTCTATCTGAATTTTGCCCAAAAAGAGCAGCGCTTTTG
GGATTGAATGTAGGAGCAGGGATACATGTAAAGCTGAGGCTTCGAAGACCGAACAATGAT
GAGGAATTTTATCCTTACAATGAAGTTTTGGATACTATGCTTCATGAACTTTGCCATAAT
GCTCATGGTCCGCACAATGCCAGTTTTTACAAACTATGGGATGAACTTAGAAAGGAATGT
GAAGATTTAATTGCTAAAGGGATAAGTGGCACAGGAGAAGGGTTTGATCTCCATGGAAGA
CAATTAGGAGGCCGTCACCCACAGCCATCCATGTCGTCTCTTCGGCAAACTGCTGCAGCT
GCTGCTGAAAATCGAGCACGTCTTAAATCCTTGCTACCATCTGGGCCTAGACGCCTGGGT
GGTGACCATTCTATTAAGTCTGCACTTACTCCAATTCAAGCTGCAGCAATGGCTGCAGAA
AGGAGATTACAGGATAATATTTGGTGTGGTTCTGAATTGTGTGAACTATCAGACTTAGAT
GAAACTTCTGATGCATTACCTGAGACTTTACCACTAGGGCATACTTCTGATAGATCCAAG
CTCTCTAATGGGTTTGATTCACTGTCTTCCAAGGTAACATCTCGAAAAAGAAGTCGAGAA
TCAAATTCTGTATCATCCTCAAAGTCCTTGCATGGCCATACTGTGACTAAGCCAGTATCT
AAGCCCCTGTCTAACCATGATAAGGAAATTGCTCACAGAGTTGGTCAGGTAGAAGGGAAA
TCTCATAATGTGGCATCAAGAGGTTATACAGAGTCTTTTATTGATTTAACTGGCAATTCT
TCGAGTTCTACATCAATACATGGCCATGATGACTTACACGGTCCCAATGAATCAATGATG
TGGGAGTGTTTAATGTGCACACTGTTGAACCCACCATTAGCTCCTTTGTGCAAAGTATGC
CAAACCCAAAAGCCCAAAGACGTGGATGACAGAAATAGTATATGGTCGTGCAAATTTTGT
ACCCTGGATAACAGTCTGAAGTTGGATCAGTGCACAGCCTGTGGAGAGTGGAGATATTCT
CACGGCCCTCCTGTAGCAACATCAGCGCCCAATCTTGGCACTTGA

Peptide Sequence

PEP ID

Solyc12g015660.2.1
PEP Infomation

DNA damage response protein WSS1 (AHRD V3.3 *** W9QFU6_9ROSA)
Sequence

MNLGDLNKVWEIKALKRKPKNEEANKILEKIAKQVQPIMRKHNWRVKLLSEFCPKRAALL
GLNVGAGIHVKLRLRRPNNDEEFYPYNEVLDTMLHELCHNAHGPHNASFYKLWDELRKEC
EDLIAKGISGTGEGFDLHGRQLGGRHPQPSMSSLRQTAAAAAENRARLKSLLPSGPRRLG
GDHSIKSALTPIQAAAMAAERRLQDNIWCGSELCELSDLDETSDALPETLPLGHTSDRSK
LSNGFDSLSSKVTSRKRSRESNSVSSSKSLHGHTVTKPVSKPLSNHDKEIAHRVGQVEGK
SHNVASRGYTESFIDLTGNSSSSTSIHGHDDLHGPNESMMWECLMCTLLNPPLAPLCKVC
QTQKPKDVDDRNSIWSCKFCTLDNSLKLDQCTACGEWRYSHGPPVATSAPNLGT*

Transcript Sequence

Transcript ID

Solyc12g015660.2.1
Transcript Infomation

DNA damage response protein WSS1 (AHRD V3.3 *** W9QFU6_9ROSA)
Sequence

TATCAAATTATTAAGCAAAACCTATTTTTGTACAACTTTGCATAACTTTGTGTCGAACTT
AATAATTTTTTTGAGGTGTTTATTGAAGGTGCATCACGCCCCAAACCAACACCTCAAATC
TTAAAATCCCGCCAATATCAAAACGGAGCAAACTTTCGATTTTCGAATCCTCGGCGGCGT
TTCAACGTTTTCCATTAAATTATGGTTTCAATTTCTCAACAGAACTGGTTTTCGAAATTC
TTTTGAATTCTTCATCGTAAAAATTTTGCTTTTTTCTATCAGAAAAATCTAGGGTTTGCT
TTAGAAGAATGAATTTGGGCGATCTTAATAAGGTATGGGAAATCAAAGCTTTGAAGCGTA
AACCGAAAAATGAAGAAGCGAACAAGATTCTGGAGAAAATTGCTAAACAGGTTCAGCCCA
TTATGCGTAAACATAACTGGAGAGTTAAACTTCTATCTGAATTTTGCCCAAAAAGAGCAG
CGCTTTTGGGATTGAATGTAGGAGCAGGGATACATGTAAAGCTGAGGCTTCGAAGACCGA
ACAATGATGAGGAATTTTATCCTTACAATGAAGTTTTGGATACTATGCTTCATGAACTTT
GCCATAATGCTCATGGTCCGCACAATGCCAGTTTTTACAAACTATGGGATGAACTTAGAA
AGGAATGTGAAGATTTAATTGCTAAAGGGATAAGTGGCACAGGAGAAGGGTTTGATCTCC
ATGGAAGACAATTAGGAGGCCGTCACCCACAGCCATCCATGTCGTCTCTTCGGCAAACTG
CTGCAGCTGCTGCTGAAAATCGAGCACGTCTTAAATCCTTGCTACCATCTGGGCCTAGAC
GCCTGGGTGGTGACCATTCTATTAAGTCTGCACTTACTCCAATTCAAGCTGCAGCAATGG
CTGCAGAAAGGAGATTACAGGATAATATTTGGTGTGGTTCTGAATTGTGTGAACTATCAG
ACTTAGATGAAACTTCTGATGCATTACCTGAGACTTTACCACTAGGGCATACTTCTGATA
GATCCAAGCTCTCTAATGGGTTTGATTCACTGTCTTCCAAGGTAACATCTCGAAAAAGAA
GTCGAGAATCAAATTCTGTATCATCCTCAAAGTCCTTGCATGGCCATACTGTGACTAAGC
CAGTATCTAAGCCCCTGTCTAACCATGATAAGGAAATTGCTCACAGAGTTGGTCAGGTAG
AAGGGAAATCTCATAATGTGGCATCAAGAGGTTATACAGAGTCTTTTATTGATTTAACTG
GCAATTCTTCGAGTTCTACATCAATACATGGCCATGATGACTTACACGGTCCCAATGAAT
CAATGATGTGGGAGTGTTTAATGTGCACACTGTTGAACCCACCATTAGCTCCTTTGTGCA
AAGTATGCCAAACCCAAAAGCCCAAAGACGTGGATGACAGAAATAGTATATGGTCGTGCA
AATTTTGTACCCTGGATAACAGTCTGAAGTTGGATCAGTGCACAGCCTGTGGAGAGTGGA
GATATTCTCACGGCCCTCCTGTAGCAACATCAGCGCCCAATCTTGGCACTTGAGGTTAAC
ATGAATTGTGGGAACTCACATTTTTTCCTCGAAATTGTCACTCCTGATTATTGATGTCAA
TTTTGCATTGCCCGTCAGTTGATCAAGTATTCAAGAATTCACCTAGTTTGATAAACTGAA
AAAGCTGTTGGTTTTGCTAATTGTGCTAAGGTGGTAATTTTACTTGTGAATCTCCAATGG
AAGCTTGTTTATCCACATACTTCCCTCTCAATTTTCTTCATGTCAATTTCTTATTATCGA
GAAGTATGCTATTCGCATTTGGAAAGAAAGAATCAACATATCTGCAACATGTTTTTGTTA
TTTTTGGTAGAGTTGAGCTTGTCTTGAAAGATGTAGATAGGGAAATACTCTTTGGAAGAT
GTTCACCTCCTCCCTGCAGCAGATTTTCATTATGCCCCTTGAATATCTTGAAAGACTGAT
TAGGTTCTTCTGTAGAGAAAGAACACTGCCATTTAGCACTCATGGATGTGCTGATTTTAT
CCCAAATTTGGAAATTGAAATCCTCGACTCGTAATGGCATTTGAACAGAGCATGCCTCAC
TAATTCAGGTGGCTGTGTAGATAGACCCAGAGAGTGAACATCAAGTTTTTTCAGGGATGA
TGAACATGGAAGTTTTCATGGCTGATGATGTAATTATTTCATGGCCAAATTATCAAGCTC
AACGCGAATTTGAATTAATTGTTCATGGTGAGCAAATCCAAATTATTATTATTATTTGTC
AAGTGTTCATGACTGAGAGTTTAGATTTATGATCAAGCTCTAAAACTTAAAAATTGAAAA
GATTGTAGTCTGTTAATATTCTTCTTAGTATTTGATTATCACATTAGAAATGTTACATGG
TGGTGGTAGTCATAATCATTTTTAAAATTTTGGACTGCATAAGTGAGAAATTTTCGAGAG
AAAAAAATGAGCGGACTCTTCATTAAAAGTAGACACGAAGTCAGAATTTAAAGTTTGTGG
ACAGAATAATGACTTCAAATTAATGTATAACAAAGGCCCAAACTAATTAGGAACAGGTAC
CAATACTTATAGTTGTATTTGGAATTTTGAGAAACACTTCACTTTTTTCATTTCACCCTT
AATTATCATTTTATTTTAAATATCATCCCAACGTTTTACCATAACTTTACTTTTAAATAT
TACCCCAATGATGGTATGGTTGACTCAAACATGGCTCGACTTCGGTCC