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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g014570.2.1
CDS Infomation

Glycerophosphoryl diester phosphodiesterase, putative (AHRD V3.3 *** B9SSQ8_RICCO)
Sequence

ATGTGGAATCTCCGGTCTCTCTCATGGTCATTTGTTCTCCTCACCTGCTTCTCAGTTGCT
GCTCAAGGAGTTAATAGGACGAAATGGCTCACACTAAACGGAAATGCACCATTAGTTATA
GCCCGTGGTGGATTTTCTGGATTATTGCCTGATTCAAGCTATGATGCATATATTATGGGA
TTGGAAACTAGCTTGCCCAATGCGATTATTTGGTGTGATGTGCAGCTTACTAAAGACGGG
GTTGGCATCTGTTTTCCTGACCTCAAGCTCGACAATGCTTCTGACATTGATTTTTACTTC
AAAAATAAGAAGAGTAAATACTTAGTGAATGGAGTTCCAACACAAGGATGGTTCTCTATA
GATTACAATTTGAAAGATCTCGTGCATGTCACCTTAAAGCAAGGAGTTTATTCACGAACT
CAAAGATTTGATGGATCACAACAAAGCATTCTTACTGTCCAGGATGTGGTAAACCAAGTC
AAACCTCCGGGATTCTGGTTGAACATCCAGCATGACAACTTCTTCAGCCAGCATAATTTG
AGTATGAAAAGTTATATTATATCCCTGACCAGGGGTGTTCTGATCAACTATATTTCATCG
CCTGAGGTGAATTTCCTCAGAAGTATTCTGTCTCGACTCAATCCACGAGTTACAAAACTC
GTTTTCCGGTTTCTTGGACAGGATGATGTTGAGCCTTCAACAAATCAAACATATGGTTCT
TTATTGAAGAACCTCACATTTATCAAAACCTTCGCCTCTGGAATTCTCGTTCCCAAATCT
TATATCTGGCCAGTGGATAACTCACTCTACCTACAACCATATACATCACTTGTCTTAGAT
GCTCATAAAGAAGGTCTTCAGATTTTTGCATCGGAGTTTGCAAATGATGTGCCTTTTGCT
TACAATTACAGCTATGATCCCACATCTGAGTATTTGTCCTTCGTTGACAATGGCAACTTC
TCTGTTGATGGAGTTCTGTCTGACTTTCCAGTAACTCCATCAGCGACAATAGATTGCTTT
ACTCATTTGGATAAGAATGATAAACCTCAAGAAAAGCTTCTGGTTATCACATCTGAAGGA
GCAAGTGGAGACTATCCGGGTTGTACTGATTTGGCATATACAAAAGCTGCTTCGGATGGT
GCTGATGTTCTTGACTGTCCTGTTCAAATGGCAAAGGATGGAATACCCTTCTGCCTGGGC
TCTATTAATTTGATAGATAAGACTACAGTTTTTCGATCGCCATTCATCAATATTGCTAGT
ACTGTCCCAGAACTGAACATAACTAATGGAATATTCACCTTTAACCTCACTTGGGATGAG
ATTAAGAGCCTGAAACCGGAAATAACAAACCCATGGTTAGAGTTTAGATTGTACCGAAAT
CCAAAAGCCAGAAATGAGGGAAACTTTGTTTCATTGATGGAATTCTTGACATATGCAAAA
AATGCCACAACTGTATCTGGTGTCATGATCAGCATAGAGAATGCAGCTTACCTGGCAAAT
CAGGGTTTTGGTGTAACTGATGCTGTTCTTGAAGCCTTAAGGAATGCTGGTTATAATAAT
CAGACAGCGAAGAAAGTTATGATCCAATCAAAAGACAGTTCAGTTCTGAAAGAATTTAAG
AAAAACCGCTATGAACTTGTTTATAGGGTTGCTGATGATATCAGTGATATTGAGAGCTCA
ACTATATCCGAGATCAGGAGCTTTGCTAGTTCTGTAATTTTAACCAAGAAATCTGTTTTT
CCAAGTGAGAGTCAATTTCTTGTTGGGAAAACAAATGTGGTGGAGAAACTGCACTCATCA
AATCTCTCAGTATACGTTCAACACTTTAACAATGAGTTTGTGTCTCAACCATGGGATTTT
TTCTCAGATTCATCTGTAGAGATAAACAATTATTTTGTTGGAGCTGGCATTGACGGTATT
ATAACAGATTTCCCTCGCACGGCTGCTAGATACAGAAGGAACCGTTGTTTGCATTACAAA
GTCCCACCAATGTATTTTAGCCTTGTTAGTCCTGGAGTTCTCCAACAATTCATGTCTCGT
CAATCTTTGCCACCAGCAGAAGCTCCCAGCCCAATACTTACGGAAAGTGATGTGGTTGAG
CCACCTCTACCTCCTGTTGCAAAGATTACCCCTACTGCTCGCAATGAGTCTACAGCTAGT
GCAGCTCCCACCTCTCCAACCGGTCAATCCTCAGTTGTAGCCGGCGTTTTCACATCCTGC
CTCACCATTCTTCTTGCTGATCTTGTCATCTTTTGA

Peptide Sequence

PEP ID

Solyc12g014570.2.1
PEP Infomation

Glycerophosphoryl diester phosphodiesterase, putative (AHRD V3.3 *** B9SSQ8_RICCO)
Sequence

MWNLRSLSWSFVLLTCFSVAAQGVNRTKWLTLNGNAPLVIARGGFSGLLPDSSYDAYIMG
LETSLPNAIIWCDVQLTKDGVGICFPDLKLDNASDIDFYFKNKKSKYLVNGVPTQGWFSI
DYNLKDLVHVTLKQGVYSRTQRFDGSQQSILTVQDVVNQVKPPGFWLNIQHDNFFSQHNL
SMKSYIISLTRGVLINYISSPEVNFLRSILSRLNPRVTKLVFRFLGQDDVEPSTNQTYGS
LLKNLTFIKTFASGILVPKSYIWPVDNSLYLQPYTSLVLDAHKEGLQIFASEFANDVPFA
YNYSYDPTSEYLSFVDNGNFSVDGVLSDFPVTPSATIDCFTHLDKNDKPQEKLLVITSEG
ASGDYPGCTDLAYTKAASDGADVLDCPVQMAKDGIPFCLGSINLIDKTTVFRSPFINIAS
TVPELNITNGIFTFNLTWDEIKSLKPEITNPWLEFRLYRNPKARNEGNFVSLMEFLTYAK
NATTVSGVMISIENAAYLANQGFGVTDAVLEALRNAGYNNQTAKKVMIQSKDSSVLKEFK
KNRYELVYRVADDISDIESSTISEIRSFASSVILTKKSVFPSESQFLVGKTNVVEKLHSS
NLSVYVQHFNNEFVSQPWDFFSDSSVEINNYFVGAGIDGIITDFPRTAARYRRNRCLHYK
VPPMYFSLVSPGVLQQFMSRQSLPPAEAPSPILTESDVVEPPLPPVAKITPTARNESTAS
AAPTSPTGQSSVVAGVFTSCLTILLADLVIF*

Transcript Sequence

Transcript ID

Solyc12g014570.2.1
Transcript Infomation

Glycerophosphoryl diester phosphodiesterase, putative (AHRD V3.3 *** B9SSQ8_RICCO)
Sequence

GCAACTTTTTAAAATTGCTAAAACCTCTTTCGTTTTCCTTCATCATTCTGTCGAACCCAA
ATATATTTCACATTTCCGGCGAAACTTTCTCCGGTAATTGTCGCCGGCAATGTGGAATCT
CCGGTCTCTCTCATGGTCATTTGTTCTCCTCACCTGCTTCTCAGTTGCTGCTCAAGGAGT
TAATAGGACGAAATGGCTCACACTAAACGGAAATGCACCATTAGTTATAGCCCGTGGTGG
ATTTTCTGGATTATTGCCTGATTCAAGCTATGATGCATATATTATGGGATTGGAAACTAG
CTTGCCCAATGCGATTATTTGGTGTGATGTGCAGCTTACTAAAGACGGGGTTGGCATCTG
TTTTCCTGACCTCAAGCTCGACAATGCTTCTGACATTGATTTTTACTTCAAAAATAAGAA
GAGTAAATACTTAGTGAATGGAGTTCCAACACAAGGATGGTTCTCTATAGATTACAATTT
GAAAGATCTCGTGCATGTCACCTTAAAGCAAGGAGTTTATTCACGAACTCAAAGATTTGA
TGGATCACAACAAAGCATTCTTACTGTCCAGGATGTGGTAAACCAAGTCAAACCTCCGGG
ATTCTGGTTGAACATCCAGCATGACAACTTCTTCAGCCAGCATAATTTGAGTATGAAAAG
TTATATTATATCCCTGACCAGGGGTGTTCTGATCAACTATATTTCATCGCCTGAGGTGAA
TTTCCTCAGAAGTATTCTGTCTCGACTCAATCCACGAGTTACAAAACTCGTTTTCCGGTT
TCTTGGACAGGATGATGTTGAGCCTTCAACAAATCAAACATATGGTTCTTTATTGAAGAA
CCTCACATTTATCAAAACCTTCGCCTCTGGAATTCTCGTTCCCAAATCTTATATCTGGCC
AGTGGATAACTCACTCTACCTACAACCATATACATCACTTGTCTTAGATGCTCATAAAGA
AGGTCTTCAGATTTTTGCATCGGAGTTTGCAAATGATGTGCCTTTTGCTTACAATTACAG
CTATGATCCCACATCTGAGTATTTGTCCTTCGTTGACAATGGCAACTTCTCTGTTGATGG
AGTTCTGTCTGACTTTCCAGTAACTCCATCAGCGACAATAGATTGCTTTACTCATTTGGA
TAAGAATGATAAACCTCAAGAAAAGCTTCTGGTTATCACATCTGAAGGAGCAAGTGGAGA
CTATCCGGGTTGTACTGATTTGGCATATACAAAAGCTGCTTCGGATGGTGCTGATGTTCT
TGACTGTCCTGTTCAAATGGCAAAGGATGGAATACCCTTCTGCCTGGGCTCTATTAATTT
GATAGATAAGACTACAGTTTTTCGATCGCCATTCATCAATATTGCTAGTACTGTCCCAGA
ACTGAACATAACTAATGGAATATTCACCTTTAACCTCACTTGGGATGAGATTAAGAGCCT
GAAACCGGAAATAACAAACCCATGGTTAGAGTTTAGATTGTACCGAAATCCAAAAGCCAG
AAATGAGGGAAACTTTGTTTCATTGATGGAATTCTTGACATATGCAAAAAATGCCACAAC
TGTATCTGGTGTCATGATCAGCATAGAGAATGCAGCTTACCTGGCAAATCAGGGTTTTGG
TGTAACTGATGCTGTTCTTGAAGCCTTAAGGAATGCTGGTTATAATAATCAGACAGCGAA
GAAAGTTATGATCCAATCAAAAGACAGTTCAGTTCTGAAAGAATTTAAGAAAAACCGCTA
TGAACTTGTTTATAGGGTTGCTGATGATATCAGTGATATTGAGAGCTCAACTATATCCGA
GATCAGGAGCTTTGCTAGTTCTGTAATTTTAACCAAGAAATCTGTTTTTCCAAGTGAGAG
TCAATTTCTTGTTGGGAAAACAAATGTGGTGGAGAAACTGCACTCATCAAATCTCTCAGT
ATACGTTCAACACTTTAACAATGAGTTTGTGTCTCAACCATGGGATTTTTTCTCAGATTC
ATCTGTAGAGATAAACAATTATTTTGTTGGAGCTGGCATTGACGGTATTATAACAGATTT
CCCTCGCACGGCTGCTAGATACAGAAGGAACCGTTGTTTGCATTACAAAGTCCCACCAAT
GTATTTTAGCCTTGTTAGTCCTGGAGTTCTCCAACAATTCATGTCTCGTCAATCTTTGCC
ACCAGCAGAAGCTCCCAGCCCAATACTTACGGAAAGTGATGTGGTTGAGCCACCTCTACC
TCCTGTTGCAAAGATTACCCCTACTGCTCGCAATGAGTCTACAGCTAGTGCAGCTCCCAC
CTCTCCAACCGGTCAATCCTCAGTTGTAGCCGGCGTTTTCACATCCTGCCTCACCATTCT
TCTTGCTGATCTTGTCATCTTTTGATCTCAGTAAGACCATTTTTGTGCAATTGTATCTCC
ATTTTGCAGGTAAGTTTCATTTCTTCTAAAAAAATAATTAGCCTATGTTTCGTTTATAAG
GTCAATTAGTTAAATATTAAGAATGTAATTAGTCTAAAATTATGTTAATCCTTTGGTAAT
GTGTTTGTTGCCAAAATTTTATAGCAGTGTTAAAAAGAGATTGGACTAGTCCTTATTGAG
ACAACATAAATTACTCTAAATATATATGCAATAAAGTTTTTCTTTAGTACTCCATAATAC
ATTATAATATAAC