Plant GARDEN
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g014540.2.1
CDS Infomation

PHD finger family protein (AHRD V3.3 *** B9GJG6_POPTR)
Sequence

ATGGATTCCGCGGTGGAGATCCAACCGGAGGTTGGATCTGATGGTGTGGGGGAGAAAAGG
TTGGCTGATGATGATGTGGAATTGGTGGAACCAGCTCCGAAGAAAGCGAGGGGTGAGGTG
ATTGGGAATACGAAGAAGGTTGCTGAAATGGTGCTTGTACTTGCTGCTTTAGGGAAGATG
AGAGGAGGTAGGGTTCCTACTGCTGCGGAGAGGGAAATGATGGCAGAGGCAAGGGAGAGT
TTGGCTCAGGTATGCCAAAGTTTTGCACCCAAGGATGTGTTTCCAAGAGATGCTTTTGGT
GCTGTTATGGAGGATCTCGGTCTTAATAAGCTGAAGGATCAGAGGCTAGGATTTCGCCCT
CCCAAAGTGTCCATTGCTGAGAAGTTACTGATAGCCAAAGAAAAGTTGGAAAAAACTGAG
GAATTTGCTGTACCCGCTGCTACATATTCATCTCAACGGCCTCAATCTAATATGGCTGCA
ACAATTGAAAACCGTGGTCCATCACATGTTCGTATGTTTCCTCACAATAAAGCAAATCAT
GCGGTAAATTCCTCAGGAAGCTTGCAATCTGCTTCGCCTTTGGTTCATGGAACTCCGGCA
AGTTCTGCACCATTACCTTATCAGCTGCCTACCAGTGAGGTCAGACCAGTAATTTCTAGT
GGAGTGGTCTCTGGGAATCCAGTAAGGGATTCTTCTCTAGTTGGATTGCCCAGAGTTGAC
AGGCCAAGTTTCAGAATGGATGGACGACCAAATGGATCTTCCCATGTGTTGCAAGTTCAA
GCAACTTCTGGAGATCATTCTGCTATAAGAACTCCAACCTGGTCGGTGCAACCTGCATCA
GTTGCAGCAGCTAAACGTGGACCAGATACCAGGGTGACATCACAGACAGGTAACAAAGTT
GAGGGAGGAGCTGATGTCAAATCGCAAATGACAGCAAATAGGCCATTTATAACTCAGACC
ACAGCTGGAAATCTACCAACTACACTCCCACACTTACAAGGGGCAAGCTTTGTCAAGTCT
CCTCCTCTGAGCAGCACTCATGCTGAAATTGGCAAGATCGTTCAGAAGTTTATTCAACCG
CGCCTCTCTGAGCGGCCTGCTTGGACTCCGCCATCTCGCGATTATATTAGTAAGGCTTTG
ACTTGCCAAATGTGCAAATCAACAGTGAATGAGGTTGATAATGTTCTTGTTTGTGATGCT
TGTGAGAAAGGGTATCACTTGAAATGTCTCAAGATGACAACTCAAAAAGGAGGTCCTAGA
GGGGAATGGCATTGTGGAAAGTGCTTGTCAATGACCAATGGAAAACCCCCGCCTCCTAAA
TATGGTCGTGTAATGAGGAATTTTAATGCCCCAAGAATATCTACAATTGCATCAGTTGTT
CAATCATCACCGGATAAAAAAGCTTCTGGTCTATATGAGAAGGTTATTCTACAGAAGTTT
GTACCGAATGGAAAGGTTCCTTTGAAGAACTCGCCTCCCGTTACTATGGAAAATAATGAT
AGGAATCTACCATCTGAGCCAATGATGAGAAGTGAAAAAGAAATGGGAGGAAATATTATT
GTGTCGGGTAAAGAAAATATGGAGAGTAAAGATTCCATGAGATCTTGTTCAAATAATGTG
ACTGTATCTTCCAGTGATCAGTATCTTTCTACATCTGCTGGCTCACCAGTTAATACATCT
TCTGAAGAAAAAGTGGTTGAGTTGAAACCTCAGGCTCATCCTGAAACAGTTTGCCATTCA
TCTGATCCCTCTCAAGCTCTTAATCACCTGCAAAGAAATGACCATGAAGAGGTGGCAAAC
ACAGCTGCGATGCCATTGAAGCTGGTTGGTGAAACTCAGCCCATGATCAGTAGATCAAAT
GTAGGTAACAGTTCCAGTAATGAATCTAAAAACGAAGAGCAAGCTGTTGAAAAAATAAAT
CCTGCTGAAACTGCTGTAGCCGCCAATGAGGATGCTGAGTGTAGTAGCTCATCATTTGAT
CATTTTCAAAATGTTGACTGGGTTGGAAACGTTCTTCAAGTTGCAGATGACAAGTATTAT
TATCAATCTTGCCGCATTAATGGATTCATATATAGTGTTCAGGACTATGCTCTTATACGT
TTTGAGAATGAGCGATTGATTCCTTCAAAACTTCTGGCTATGTGGGAGGACAAAAAAGCG
GGAACAAAGTGGGTTTCTATCAATCAATGTTACTTTGCACGTGAATTACCACAGTCTGTA
GGCCGCCCATGCTTGGAGAACAATAATGAGGTTTATTTGTCTACTTATAGTAGCATAGTA
ATGGCTGGCTTGATACAAGGTCCATGCGAAGTACATCCTCCACGAAAGTTTACCGAGGAA
AGTGAGAGGAGAGCTCGCCTAGCAAAGGGGTCTAATGATGTATCACAACCTCTTTACATA
TGCAAATGGATTTATGATGAATCAAAAGGGCTATTTCGTGATGTCTCTTGTTGA

Peptide Sequence

PEP ID

Solyc12g014540.2.1
PEP Infomation

PHD finger family protein (AHRD V3.3 *** B9GJG6_POPTR)
Sequence

MDSAVEIQPEVGSDGVGEKRLADDDVELVEPAPKKARGEVIGNTKKVAEMVLVLAALGKM
RGGRVPTAAEREMMAEARESLAQVCQSFAPKDVFPRDAFGAVMEDLGLNKLKDQRLGFRP
PKVSIAEKLLIAKEKLEKTEEFAVPAATYSSQRPQSNMAATIENRGPSHVRMFPHNKANH
AVNSSGSLQSASPLVHGTPASSAPLPYQLPTSEVRPVISSGVVSGNPVRDSSLVGLPRVD
RPSFRMDGRPNGSSHVLQVQATSGDHSAIRTPTWSVQPASVAAAKRGPDTRVTSQTGNKV
EGGADVKSQMTANRPFITQTTAGNLPTTLPHLQGASFVKSPPLSSTHAEIGKIVQKFIQP
RLSERPAWTPPSRDYISKALTCQMCKSTVNEVDNVLVCDACEKGYHLKCLKMTTQKGGPR
GEWHCGKCLSMTNGKPPPPKYGRVMRNFNAPRISTIASVVQSSPDKKASGLYEKVILQKF
VPNGKVPLKNSPPVTMENNDRNLPSEPMMRSEKEMGGNIIVSGKENMESKDSMRSCSNNV
TVSSSDQYLSTSAGSPVNTSSEEKVVELKPQAHPETVCHSSDPSQALNHLQRNDHEEVAN
TAAMPLKLVGETQPMISRSNVGNSSSNESKNEEQAVEKINPAETAVAANEDAECSSSSFD
HFQNVDWVGNVLQVADDKYYYQSCRINGFIYSVQDYALIRFENERLIPSKLLAMWEDKKA
GTKWVSINQCYFARELPQSVGRPCLENNNEVYLSTYSSIVMAGLIQGPCEVHPPRKFTEE
SERRARLAKGSNDVSQPLYICKWIYDESKGLFRDVSC*

Transcript Sequence

Transcript ID

Solyc12g014540.2.1
Transcript Infomation

PHD finger family protein (AHRD V3.3 *** B9GJG6_POPTR)
Sequence

TAAACTCGGGTTCGAAGTCTCACTCTCGCTCTATCTGTTTTTCTGTGTCTCTTCCTGCTT
TAGAGGTTGCGACCTTTCTCTCTCACGCACACACACACTCAATTACATTAAACCCTTCAC
AAATTACACCGTCAAAAACAGCACAAGGGGCTCTTCCTTTCTTCTTCAATTACCCGCCCG
AAAGGTCTCAACTGATAGCATTGCTGTGTCGGAAGAAGGATTGTTTTGAGGATTGTCATG
GTTGCAGCGATTTTCTCCAAACGGTGTCGTTTTTCGTGAGGATTGGTTAGGGTTTGATGG
ATTCCGCGGTGGAGATCCAACCGGAGGTTGGATCTGATGGTGTGGGGGAGAAAAGGTTGG
CTGATGATGATGTGGAATTGGTGGAACCAGCTCCGAAGAAAGCGAGGGGTGAGGTGATTG
GGAATACGAAGAAGGTTGCTGAAATGGTGCTTGTACTTGCTGCTTTAGGGAAGATGAGAG
GAGGTAGGGTTCCTACTGCTGCGGAGAGGGAAATGATGGCAGAGGCAAGGGAGAGTTTGG
CTCAGGTATGCCAAAGTTTTGCACCCAAGGATGTGTTTCCAAGAGATGCTTTTGGTGCTG
TTATGGAGGATCTCGGTCTTAATAAGCTGAAGGATCAGAGGCTAGGATTTCGCCCTCCCA
AAGTGTCCATTGCTGAGAAGTTACTGATAGCCAAAGAAAAGTTGGAAAAAACTGAGGAAT
TTGCTGTACCCGCTGCTACATATTCATCTCAACGGCCTCAATCTAATATGGCTGCAACAA
TTGAAAACCGTGGTCCATCACATGTTCGTATGTTTCCTCACAATAAAGCAAATCATGCGG
TAAATTCCTCAGGAAGCTTGCAATCTGCTTCGCCTTTGGTTCATGGAACTCCGGCAAGTT
CTGCACCATTACCTTATCAGCTGCCTACCAGTGAGGTCAGACCAGTAATTTCTAGTGGAG
TGGTCTCTGGGAATCCAGTAAGGGATTCTTCTCTAGTTGGATTGCCCAGAGTTGACAGGC
CAAGTTTCAGAATGGATGGACGACCAAATGGATCTTCCCATGTGTTGCAAGTTCAAGCAA
CTTCTGGAGATCATTCTGCTATAAGAACTCCAACCTGGTCGGTGCAACCTGCATCAGTTG
CAGCAGCTAAACGTGGACCAGATACCAGGGTGACATCACAGACAGGTAACAAAGTTGAGG
GAGGAGCTGATGTCAAATCGCAAATGACAGCAAATAGGCCATTTATAACTCAGACCACAG
CTGGAAATCTACCAACTACACTCCCACACTTACAAGGGGCAAGCTTTGTCAAGTCTCCTC
CTCTGAGCAGCACTCATGCTGAAATTGGCAAGATCGTTCAGAAGTTTATTCAACCGCGCC
TCTCTGAGCGGCCTGCTTGGACTCCGCCATCTCGCGATTATATTAGTAAGGCTTTGACTT
GCCAAATGTGCAAATCAACAGTGAATGAGGTTGATAATGTTCTTGTTTGTGATGCTTGTG
AGAAAGGGTATCACTTGAAATGTCTCAAGATGACAACTCAAAAAGGAGGTCCTAGAGGGG
AATGGCATTGTGGAAAGTGCTTGTCAATGACCAATGGAAAACCCCCGCCTCCTAAATATG
GTCGTGTAATGAGGAATTTTAATGCCCCAAGAATATCTACAATTGCATCAGTTGTTCAAT
CATCACCGGATAAAAAAGCTTCTGGTCTATATGAGAAGGTTATTCTACAGAAGTTTGTAC
CGAATGGAAAGGTTCCTTTGAAGAACTCGCCTCCCGTTACTATGGAAAATAATGATAGGA
ATCTACCATCTGAGCCAATGATGAGAAGTGAAAAAGAAATGGGAGGAAATATTATTGTGT
CGGGTAAAGAAAATATGGAGAGTAAAGATTCCATGAGATCTTGTTCAAATAATGTGACTG
TATCTTCCAGTGATCAGTATCTTTCTACATCTGCTGGCTCACCAGTTAATACATCTTCTG
AAGAAAAAGTGGTTGAGTTGAAACCTCAGGCTCATCCTGAAACAGTTTGCCATTCATCTG
ATCCCTCTCAAGCTCTTAATCACCTGCAAAGAAATGACCATGAAGAGGTGGCAAACACAG
CTGCGATGCCATTGAAGCTGGTTGGTGAAACTCAGCCCATGATCAGTAGATCAAATGTAG
GTAACAGTTCCAGTAATGAATCTAAAAACGAAGAGCAAGCTGTTGAAAAAATAAATCCTG
CTGAAACTGCTGTAGCCGCCAATGAGGATGCTGAGTGTAGTAGCTCATCATTTGATCATT
TTCAAAATGTTGACTGGGTTGGAAACGTTCTTCAAGTTGCAGATGACAAGTATTATTATC
AATCTTGCCGCATTAATGGATTCATATATAGTGTTCAGGACTATGCTCTTATACGTTTTG
AGAATGAGCGATTGATTCCTTCAAAACTTCTGGCTATGTGGGAGGACAAAAAAGCGGGAA
CAAAGTGGGTTTCTATCAATCAATGTTACTTTGCACGTGAATTACCACAGTCTGTAGGCC
GCCCATGCTTGGAGAACAATAATGAGGTTTATTTGTCTACTTATAGTAGCATAGTAATGG
CTGGCTTGATACAAGGTCCATGCGAAGTACATCCTCCACGAAAGTTTACCGAGGAAAGTG
AGAGGAGAGCTCGCCTAGCAAAGGGGTCTAATGATGTATCACAACCTCTTTACATATGCA
AATGGATTTATGATGAATCAAAAGGGCTATTTCGTGATGTCTCTTGTTGATAGGGGTCAG
CTGATAATTATCTTTCTATTGCAACTGCTATTGGCTCGTGTCTTTTGTCAGTTTGTTGCA
GCATTGGTGGCCATTTGACATTTGTGGAGGAAGTCTCAGATGGTGTACAATATTTAGCTT
TAGGTCCGATCTGTATCATTCTTCCGGTAGTTATTTGTGTCCTGTCCCTCCAGTTCTTTT
CTGTTTTTATTAGGTAGCAATTTCAAAAGGTGAGAAAAGTAGGTTGATGAATATCATTCA
TCCAGCTAAGTATGAAATAAAAACATCCTTACTTTTAGCTTTCTATTTTCAAGTATCACA
GTTCTCGACTCAGCTGTGACCCTCCTCCCTCCGCCCCCCCCTTAGATTTGTGAAGACGCT
TTCAAAACTCAGAAGGTTGTTGTTTGAGGCGATGATTGGCTGCTATCTATAATAGACTTA
AATGTTATACTGCTTCGTTTCGTTGGTGATTTATTTTGAAGATTTCTCATCAATTTTTAT
ATTCTCTTCTCTTAT