Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g014490.2.1
CDS Infomation

Microtubule associated family protein (AHRD V3.3 *** B9GJD5_POPTR)
Sequence

ATGCAGCAAATTTGGGATGAGGTTGGTGAAACTGATGAAGATCGAGATAAGATGCTTCTT
CAGATAGACCAGGAGTGCTTGGATGTTTACAATAGAAAAGTTGACCAAGCAGTGAAATCG
CGGGATCACCTTCTTCAGGCTTTAGCAGATGCCAAAGTTGAATTCTCCAGGCTGCTATCA
GCTCTTGGACAGAAAACATATGATGGAATTCCTGAGAAGAAATTAGGATCAATCAAGGAA
CAACTTGCAGCTATAGCACCGGCACTGGAAAAACTGTGGAAACAGAAAGATGAAAGGGTA
ATAAAGTTCTTGGATGTACAATCACAAATCAAGAAGATTAGCAGCGAGATTGCAGGGAGT
AGTGAGCAAGTAGAGACTCCTAAAGTAGATGAGTCTGATTTGTCTCTTAAAAAGCTGGAT
GAGTTTCATGCACAGCTTCAAGATCTTCAAAAAGAAAAGAGTGAGAGACTGCACAAAGTC
CTTAAATTCGTGAGCGCAATACATGATCTATGTGCTGTTCTCGGCATTGACTTCTTTAGT
ACTGCCACTGAAGTTCACCCAAGCCTGAACGATTCTACTGGTGTACAATCGAAAAGTATA
AGCAATGACACACTATCAAGTCTGGCTAGAACTGTCTTAGCACTAGAGGAAGATAAGAAG
CAAAGATTGCAGAAGCTCCAAGAACTTGCAACTCAACTGATTGATTTATGGAATTTGATG
GATACAACCGAAGAAGAACAGAGCTTGTTTGACCATGTCACCTGCAATAAATCGGCTTCA
GTTGATGAAGTGTCCATTCCTGGAGCTCTTGCTCTTGATCTGATTGAACAGGCTGAAGTT
GAAGTTGAAAGACTTGATCAGCTAAAAGCTAGCAGGATGAAGGAGATTGCTTTCAAAAAG
CAGGCAGTGCTTGAAGAGATTTTCGTTTGTTCCCACATAGAGATTGACTCTGAGGCTTCT
CAACACAAAATTATGGCACTTATTGATTCTGGGAATATTCAGCCTGCGGAGTTACTTGCG
GACATGGATAACCAGATCGTAAAAGCAAAAGAGGAGGCTGAAAGCAGGAAAGAAATATTG
GATAAAGTTGAGAAATGGATGGCAGCTTGTGAAGAAGAGAGCTGGCTTGAAGACTACAAC
AGGGATCAGAACCGGTATAATGCAAGCAGAGGTGCACACTTAAATTTGAAGAGGGCTGAA
AAGGCTCGGATATTGGTTGGCAAAATTCCAGCTCTTGTGGATTCCTTGACTACCAAAACA
AGAGCATGGGAACAAGATTGCGACACCACATTCACATATGATGGTGTTCCACTTCTTTCC
ATGCTAGATGAATATATGATGCTCAGGCACGATAGAGAAGAAGAGAAACGAAGGTTGAGG
GACCAGAAAAAGTTCCATGAGCAGATCAAAGAACAAGAAACACCATTTGGATCAACACCA
ATCCCTTCTCGACCCCTCGGTACAAAGAAGGTGGTGGGTCCACGAGCAAACGGGTCAGGT
AACAGAAGGCTGTCTCTTAACTCACATCAAAATGGTTCCAGGCCGTCAACAACTAAAGAC
GGGAGGAGAGACCACTCGAGAACGGTTGCTCCTGTAAACTATGTAGCTATTTCAAAAGAT
GAACATATTCCCAGCACACCATAG

Peptide Sequence

PEP ID

Solyc12g014490.2.1
PEP Infomation

Microtubule associated family protein (AHRD V3.3 *** B9GJD5_POPTR)
Sequence

MQQIWDEVGETDEDRDKMLLQIDQECLDVYNRKVDQAVKSRDHLLQALADAKVEFSRLLS
ALGQKTYDGIPEKKLGSIKEQLAAIAPALEKLWKQKDERVIKFLDVQSQIKKISSEIAGS
SEQVETPKVDESDLSLKKLDEFHAQLQDLQKEKSERLHKVLKFVSAIHDLCAVLGIDFFS
TATEVHPSLNDSTGVQSKSISNDTLSSLARTVLALEEDKKQRLQKLQELATQLIDLWNLM
DTTEEEQSLFDHVTCNKSASVDEVSIPGALALDLIEQAEVEVERLDQLKASRMKEIAFKK
QAVLEEIFVCSHIEIDSEASQHKIMALIDSGNIQPAELLADMDNQIVKAKEEAESRKEIL
DKVEKWMAACEEESWLEDYNRDQNRYNASRGAHLNLKRAEKARILVGKIPALVDSLTTKT
RAWEQDCDTTFTYDGVPLLSMLDEYMMLRHDREEEKRRLRDQKKFHEQIKEQETPFGSTP
IPSRPLGTKKVVGPRANGSGNRRLSLNSHQNGSRPSTTKDGRRDHSRTVAPVNYVAISKD
EHIPSTP*

Transcript Sequence

Transcript ID

Solyc12g014490.2.1
Transcript Infomation

Microtubule associated family protein (AHRD V3.3 *** B9GJD5_POPTR)
Sequence

TCACTCACTCACACTTGTTTCTGCTCGATGATTTTACACAAATTCTGATAACAGTTGTGA
TAGTCAAGCAGATCTGTCCGCCATATTCTCCCAGCTAAACCCTACTTTCTCTGTAAGCAT
TTCTGTTTTTTTTTCGACTAGTAATGGAGGCATTTGTACTATTTTGCTCTTATTTTTTCT
GTATATAATATAACGGATCATGTTGGAATTTCGTCACTGCATTTTTTAATACATGTCAAA
TCTGGTTAACGAATTGTTATGTTCAATCACTTCGTTTGTGCGCATAAGGAGAAGATTCAA
TTGTAGTAGCACTTTTTCTGCTTTTCAATTTCGTCAATTATTCACACAGGAAAATGATTA
TTATTATTATTATGTTGTAGTGCGAGTTTCATTGTTTATTTGAAACGATATATGGTTTGT
GTTTTGAAATTTAGCTTGGTTTTGTATGTATAAGTTAATGTCTGTTTCAGGTTTGATCGG
AGTAACTGAAGATGGCAGCAGTGGATGCTGATCAAAATGGAGAAACAAGTTGTAGTTTTC
TACTACAGCAGTTGCAGGCAATTTCTATTATTGTTCATGTTGAATTTATAGTTTAACAAA
AAAAATCATGTATTAGTTGTAAGAGCAATGCCGTATTATTAATCTAGTTTGCTCGGGTTA
TTCCAAAATGTTGACCGGAAGTACTATCTATTTTGCTCGGATTATTCCAAAATTTTGACC
GGAAGTGGTATCTATTTTGCTCGTATTATTTCAAAATGTTGACCGGAAGTAGTGCAGCGA
CATTTTTGGAGAGTTGGAGCAGTATTGTTGTTAATAGTATAATGAGTGATGGTTAAATAG
GTTTTATTTTTTTTTCTGAAAATGCAGCAAATTTGGGATGAGGTTGGTGAAACTGATGAA
GATCGAGATAAGATGCTTCTTCAGATAGACCAGGAGTGCTTGGATGTTTACAATAGAAAA
GTTGACCAAGCAGTGAAATCGCGGGATCACCTTCTTCAGGCTTTAGCAGATGCCAAAGTT
GAATTCTCCAGGCTGCTATCAGCTCTTGGACAGAAAACATATGATGGAATTCCTGAGAAG
AAATTAGGATCAATCAAGGAACAACTTGCAGCTATAGCACCGGCACTGGAAAAACTGTGG
AAACAGAAAGATGAAAGGGTAATAAAGTTCTTGGATGTACAATCACAAATCAAGAAGATT
AGCAGCGAGATTGCAGGGAGTAGTGAGCAAGTAGAGACTCCTAAAGTAGATGAGTCTGAT
TTGTCTCTTAAAAAGCTGGATGAGTTTCATGCACAGCTTCAAGATCTTCAAAAAGAAAAG
AGTGAGAGACTGCACAAAGTCCTTAAATTCGTGAGCGCAATACATGATCTATGTGCTGTT
CTCGGCATTGACTTCTTTAGTACTGCCACTGAAGTTCACCCAAGCCTGAACGATTCTACT
GGTGTACAATCGAAAAGTATAAGCAATGACACACTATCAAGTCTGGCTAGAACTGTCTTA
GCACTAGAGGAAGATAAGAAGCAAAGATTGCAGAAGCTCCAAGAACTTGCAACTCAACTG
ATTGATTTATGGAATTTGATGGATACAACCGAAGAAGAACAGAGCTTGTTTGACCATGTC
ACCTGCAATAAATCGGCTTCAGTTGATGAAGTGTCCATTCCTGGAGCTCTTGCTCTTGAT
CTGATTGAACAGGCTGAAGTTGAAGTTGAAAGACTTGATCAGCTAAAAGCTAGCAGGATG
AAGGAGATTGCTTTCAAAAAGCAGGCAGTGCTTGAAGAGATTTTCGTTTGTTCCCACATA
GAGATTGACTCTGAGGCTTCTCAACACAAAATTATGGCACTTATTGATTCTGGGAATATT
CAGCCTGCGGAGTTACTTGCGGACATGGATAACCAGATCGTAAAAGCAAAAGAGGAGGCT
GAAAGCAGGAAAGAAATATTGGATAAAGTTGAGAAATGGATGGCAGCTTGTGAAGAAGAG
AGCTGGCTTGAAGACTACAACAGGGATCAGAACCGGTATAATGCAAGCAGAGGTGCACAC
TTAAATTTGAAGAGGGCTGAAAAGGCTCGGATATTGGTTGGCAAAATTCCAGCTCTTGTG
GATTCCTTGACTACCAAAACAAGAGCATGGGAACAAGATTGCGACACCACATTCACATAT
GATGGTGTTCCACTTCTTTCCATGCTAGATGAATATATGATGCTCAGGCACGATAGAGAA
GAAGAGAAACGAAGGTTGAGGGACCAGAAAAAGTTCCATGAGCAGATCAAAGAACAAGAA
ACACCATTTGGATCAACACCAATCCCTTCTCGACCCCTCGGTACAAAGAAGGTGGTGGGT
CCACGAGCAAACGGGTCAGGTAACAGAAGGCTGTCTCTTAACTCACATCAAAATGGTTCC
AGGCCGTCAACAACTAAAGACGGGAGGAGAGACCACTCGAGAACGGTTGCTCCTGTAAAC
TATGTAGCTATTTCAAAAGATGAACATATTCCCAGCACACCATAGTAACTACTGAATTAG
GGACATATGTGCAGTATCCTCTGTTGTGATTAGTATCACGGATCATGTAGCAGATAAATA
TTTCTCTGAGCGTAGAGACCGATTAGCTGTTTGTGTTATATAGTGGTAATATTAGAAATT
CCTTTGAATCATTTGCATTTGTCTGAGTTCTGCATCGACATTGTTTCACCACTTGTAGCA
AATGTGATTAGCTATTGCCACTGGAACAAA