Plant GARDEN How To ▶︎

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Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g014450.2.1

CDS Infomation

extracellular ligand-gated ion channel protein (DUF3537) (AHRD V3.3 *** AT3G20300.1)

Sequence

ATGGAGGACGAGGATGAAGCTTTGGAAGATAAGACGGTATTAGTTCGAAGTGGTTCACAC
ATGTATGATGAGTTGAGGAGTTTTAGGACGTGGTTTAAGTGGATGTGTGTGGATCAATCG
AACCCTTCGTCTGCTTGTTTGTCTTGGTTTGTATTTAGTTTGCTAACTTTTGTTGTGCCG
TGGCTGTCTCATTATCTACTGGCTTGTAGCGAGTGCGATGCTGATCATAGTAGGACTTAT
GACTGTGTTACTCAGTTGTCGATGAGCAGCGTTGCTGGTCTGTCGTTCATCTGTCTTTCG
AGGTTCAATAGGAAATATGGACTTCGGAGGTTCTTGTTCCTGGATAAACTTTGTGATGAG
AGTGAGACTGTTAGAAACTGCTACACACAACAGCTCAATAGATCGACGAAGATCCTATTC
ATTTTTGTCCTTCCATGTTTTGTTGCTGAAAGCACATACAAGATTTGGTGGTACAGCTCA
GGTGGAAGCGGAATCCCGTTCTTGGGCAATGTCATCGCCTGCATTCTGGAGCTGAGCTCG
TGGTTCTACAGAACGGTCGTGTTCTTCTTAGTTTGTGTCCTTTTCCGCTTGATATGTTAC
CTTCAGATTCTCCGACTACAGGATTTCGCTCAAGTACTCTTCCATGTGGATTCTGATGTT
GAATCTGTGTTAAGAGAACACCTCAGGATCAGGAGGCATTTGAGAATTATAAGCCATAGG
TTCCGCGTATTCATCTTGTGGGCATTGATATTTATCACAGCAAGTCTATTTGCCTCCCTT
CTACTGACTACACGCCCAAATGCAGATCTACGTGTCTATAAGAGTGGTGAACTTGCGCTG
TGTTCCATCAGCCTTCTTGCTGGACTGATGATACTGTTGCGGAGTGCAACAAGAATTACT
CACAAGGCACAATCAGTAACATGCCTCGCTGCAAAATGGCATGCCTGCGCGACAATAGAC
TCGTATTATTGGGCTGAGACTGAGTCTCCTCCAGCAGCTCATCAAGTAGATTGCAACAAT
GGTTATAACGGATCATCTGATGCAGAGGATGTTGGAGATGAAGAGGATGAACTGGATAAT
ACGAAGTTTGTCCCCTCGTATGCCTATAGTACAATTTCGTTCCAAAAAAGACAGGCTCTA
GTAACATATTTTGAGAATAATCGAGCAGGAGTTACGATATATGGTTTCATGTTAGACAGA
ACTTCTCTTCACACCATTTTCGGAATAGAGCTGACACTGATGCTCTGGTTGCTTGGTAAA
ACCGTTGGCGTTTCTTGA

Peptide Sequence

PEP ID

Solyc12g014450.2.1

PEP Infomation

extracellular ligand-gated ion channel protein (DUF3537) (AHRD V3.3 *** AT3G20300.1)

Sequence

MEDEDEALEDKTVLVRSGSHMYDELRSFRTWFKWMCVDQSNPSSACLSWFVFSLLTFVVP
WLSHYLLACSECDADHSRTYDCVTQLSMSSVAGLSFICLSRFNRKYGLRRFLFLDKLCDE
SETVRNCYTQQLNRSTKILFIFVLPCFVAESTYKIWWYSSGGSGIPFLGNVIACILELSS
WFYRTVVFFLVCVLFRLICYLQILRLQDFAQVLFHVDSDVESVLREHLRIRRHLRIISHR
FRVFILWALIFITASLFASLLLTTRPNADLRVYKSGELALCSISLLAGLMILLRSATRIT
HKAQSVTCLAAKWHACATIDSYYWAETESPPAAHQVDCNNGYNGSSDAEDVGDEEDELDN
TKFVPSYAYSTISFQKRQALVTYFENNRAGVTIYGFMLDRTSLHTIFGIELTLMLWLLGK
TVGVS*

Transcript Sequence

Transcript ID

Solyc12g014450.2.1

Transcript Infomation

extracellular ligand-gated ion channel protein (DUF3537) (AHRD V3.3 *** AT3G20300.1)

Sequence

AATTATTGACTAAACCAGTGAAAATGAGCTGTTTGATCACGGAAGCTTAGATAAGCAAAA
AGTGCACCTTGAATCACAAGCTCCATGGGTTCTTCTATCTATAAAAAATAATAATAACTC
CATTGCAATCCCAACCTCTATTTATTGATCATACTATATGTAATGTCCATTGATTGGAAG
AATCCACGAGGAATCCCTTAACCTTTCGATGATTCCAACTACTTTTTGTGGTTAAAGAAA
AATTAAAATTTGAGGAATAGGAACTTGATTCATCCCTTATCCTCCTCTACTTTCCAATAT
AACCAACCATTTATTGCACCTTTTTTCTTCCTCTTGTAAAAAAAAATCAACTCATTATCA
TTTAATATTTTACAACATTTTGTTCTCTCTCCATGAACAAATTTTTGCGCTAACAAAGAC
GACTGTATAAGTTATATGCATTGACAGTATAAATATGGAGGACGAGGATGAAGCTTTGGA
AGATAAGACGGTATTAGTTCGAAGTGGTTCACACATGTATGATGAGTTGAGGAGTTTTAG
GACGTGGTTTAAGTGGATGTGTGTGGATCAATCGAACCCTTCGTCTGCTTGTTTGTCTTG
GTTTGTATTTAGTTTGCTAACTTTTGTTGTGCCGTGGCTGTCTCATTATCTACTGGCTTG
TAGCGAGTGCGATGCTGATCATAGTAGGACTTATGACTGTGTTACTCAGTTGTCGATGAG
CAGCGTTGCTGGTCTGTCGTTCATCTGTCTTTCGAGGTTCAATAGGAAATATGGACTTCG
GAGGTTCTTGTTCCTGGATAAACTTTGTGATGAGAGTGAGACTGTTAGAAACTGCTACAC
ACAACAGCTCAATAGATCGACGAAGATCCTATTCATTTTTGTCCTTCCATGTTTTGTTGC
TGAAAGCACATACAAGATTTGGTGGTACAGCTCAGGTGGAAGCGGAATCCCGTTCTTGGG
CAATGTCATCGCCTGCATTCTGGAGCTGAGCTCGTGGTTCTACAGAACGGTCGTGTTCTT
CTTAGTTTGTGTCCTTTTCCGCTTGATATGTTACCTTCAGATTCTCCGACTACAGGATTT
CGCTCAAGTACTCTTCCATGTGGATTCTGATGTTGAATCTGTGTTAAGAGAACACCTCAG
GATCAGGAGGCATTTGAGAATTATAAGCCATAGGTTCCGCGTATTCATCTTGTGGGCATT
GATATTTATCACAGCAAGTCTATTTGCCTCCCTTCTACTGACTACACGCCCAAATGCAGA
TCTACGTGTCTATAAGAGTGGTGAACTTGCGCTGTGTTCCATCAGCCTTCTTGCTGGACT
GATGATACTGTTGCGGAGTGCAACAAGAATTACTCACAAGGCACAATCAGTAACATGCCT
CGCTGCAAAATGGCATGCCTGCGCGACAATAGACTCGTATTATTGGGCTGAGACTGAGTC
TCCTCCAGCAGCTCATCAAGTAGATTGCAACAATGGTTATAACGGATCATCTGATGCAGA
GGATGTTGGAGATGAAGAGGATGAACTGGATAATACGAAGTTTGTCCCCTCGTATGCCTA
TAGTACAATTTCGTTCCAAAAAAGACAGGCTCTAGTAACATATTTTGAGAATAATCGAGC
AGGAGTTACGATATATGGTTTCATGTTAGACAGAACTTCTCTTCACACCATTTTCGGAAT
AGAGCTGACACTGATGCTCTGGTTGCTTGGTAAAACCGTTGGCGTTTCTTGAATTATTAA
TTTGCTGTGTATTTATGTCGTTGCTCATTGAAATTGTATAGTATAAGACATGAAATGTGG
ATCCATGATATGGTTGTACTTGTATGGTTCCTTGGACACTGTTAAACAGATGAAAATTTT
CTTCTTGCTTATGATAAATTTCCATGAATAATTTTATGGATTTATTTGTTAGTTTTCT