Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g014420.2.1
CDS Infomation

Glucan endo-1,3-beta-glucosidase, putative (AHRD V3.3 *** B9SU04_RICCO)
Sequence

ATGGCCGATTTTACTACATTAACTTCGCTTTTCCTTCTTCTCTCTTTGTTATCTATTGCG
AATTCCGGTTCTATTGGTATAAATTATGGCCGAATTGCTAATAACCTTCCGACTCCATCA
GAAGTTGTTCAGCTCCTCAAATCTCAAGGCATTCATCGCGTAAAGCTTTACGATACTGAT
TCCGCTGTTCTTACAGCTCTTTCTGGATCCAATATATCAGTTAGCGTTGCCTTACCTAAC
GAGCAGCTATCCGATGCAGCTTCGAAGCAGTCTTTTACGGATTCATGGGTTCAGTCGAAT
ATTGTTCGTTATTATCCAAAAACAAATATAGAATCTATAGCGGTTGGAAATGAAGTTTTT
GTAGATCCAAACAATACAACCAAATTTCTAGTACCAGCAATGAAGAATGTTTACGCATCG
CTCGTTAAATACGGCGTCGCTTCGTCCATCAAAGTTTCATCCCCTGTTGCACTCAGTGCT
CTGCAAAATTCATATCCTTCATCTGCTGGTTCATTCAAAACGGAGCTAATCGAACCTGTT
ATTAAACCGATGTTGAGTTTCCTCAAACAATCGGGTTCCTTTTTAGCTGTTAATATTTAT
CCATTTTTTGCTTATGTAGCGAATACGGATACGATTTCTTTGGATTATGCTTTGTTTAGA
GATAACAAAGGTGTGACTGATCCTAACAATGGACTTGTTTATAAGAGCCTTTTCGAAGCT
CAAATTGATGCTGTTTATGCTGCAATGAAAGCTTTGAATTTCGATGATGTAAAAATGGAG
ATTACTGAAACTGGATGGCCTTCAAAAGGCGATGAAAACGAGACTGGTGCAAGTACTGAA
AATGCTGCAGCTTACAACGGTAATCTGGTAAAAAGAGTACTTACTGGAAGTGGGACCCCT
TTAAAGCCCGATGAACCTCTTAACGTCTATTTATTCGCTTTGTTCAATGAAAATCAAAAG
CCCGGGCCCGTTTCAGAACGGAACTACGGGCTTTTCTATCCTAGTAAAGAAAAGGTTTAC
GATATTACGCTTACTCTAGAAGGTTTAGAGGCTGGGGTTAATAACGGAAGTAAAAGCCAG
GTGGTGAAGATTCCGGTACCGTCTCCGTCGTCGTCGCCGTCTCCAGCGCCGGTTGTTGGC
GGCGGTGTGGAGGAGAGTAAGGTGGTGAACACGTGGTGTGTGGCGAATGAGAAAGCTGGG
GCGGAGAAGCTGCAAGCGGCGCTGGATTATGCTTGTGGAGAAGGAGGAGCTGATTGTCGT
CCGATTCAGCCGGGTGCCACGTGTCATAATCCTGATACACTTGAAGCACATGCTTCTTAT
GCGTTCAATAGTTATTATCAGAAGAAAGCACGTGGGACTGGCACCTGTGATTTCAAAGGA
GCAGCTTATGTCGTCACTCAACATCCTAAATATGGCAGTTGCAAGTTTCCAACAGGATAT
TAA

Peptide Sequence

PEP ID

Solyc12g014420.2.1
PEP Infomation

Glucan endo-1,3-beta-glucosidase, putative (AHRD V3.3 *** B9SU04_RICCO)
Sequence

MADFTTLTSLFLLLSLLSIANSGSIGINYGRIANNLPTPSEVVQLLKSQGIHRVKLYDTD
SAVLTALSGSNISVSVALPNEQLSDAASKQSFTDSWVQSNIVRYYPKTNIESIAVGNEVF
VDPNNTTKFLVPAMKNVYASLVKYGVASSIKVSSPVALSALQNSYPSSAGSFKTELIEPV
IKPMLSFLKQSGSFLAVNIYPFFAYVANTDTISLDYALFRDNKGVTDPNNGLVYKSLFEA
QIDAVYAAMKALNFDDVKMEITETGWPSKGDENETGASTENAAAYNGNLVKRVLTGSGTP
LKPDEPLNVYLFALFNENQKPGPVSERNYGLFYPSKEKVYDITLTLEGLEAGVNNGSKSQ
VVKIPVPSPSSSPSPAPVVGGGVEESKVVNTWCVANEKAGAEKLQAALDYACGEGGADCR
PIQPGATCHNPDTLEAHASYAFNSYYQKKARGTGTCDFKGAAYVVTQHPKYGSCKFPTGY
*

Transcript Sequence

Transcript ID

Solyc12g014420.2.1
Transcript Infomation

Glucan endo-1,3-beta-glucosidase, putative (AHRD V3.3 *** B9SU04_RICCO)
Sequence

TAAATAAACTCAACCATAATCACCAAATACACAAAAATCCTCTTCCTTCTCATTGCTCTG
TTTTCTTTTTTCTCCTTACATACACACAGCAATGGCCGATTTTACTACATTAACTTCGCT
TTTCCTTCTTCTCTCTTTGTTATCTATTGCGAATTCCGGTTCTATTGGTATAAATTATGG
CCGAATTGCTAATAACCTTCCGACTCCATCAGAAGTTGTTCAGCTCCTCAAATCTCAAGG
CATTCATCGCGTAAAGCTTTACGATACTGATTCCGCTGTTCTTACAGCTCTTTCTGGATC
CAATATATCAGTTAGCGTTGCCTTACCTAACGAGCAGCTATCCGATGCAGCTTCGAAGCA
GTCTTTTACGGATTCATGGGTTCAGTCGAATATTGTTCGTTATTATCCAAAAACAAATAT
AGAATCTATAGCGGTTGGAAATGAAGTTTTTGTAGATCCAAACAATACAACCAAATTTCT
AGTACCAGCAATGAAGAATGTTTACGCATCGCTCGTTAAATACGGCGTCGCTTCGTCCAT
CAAAGTTTCATCCCCTGTTGCACTCAGTGCTCTGCAAAATTCATATCCTTCATCTGCTGG
TTCATTCAAAACGGAGCTAATCGAACCTGTTATTAAACCGATGTTGAGTTTCCTCAAACA
ATCGGGTTCCTTTTTAGCTGTTAATATTTATCCATTTTTTGCTTATGTAGCGAATACGGA
TACGATTTCTTTGGATTATGCTTTGTTTAGAGATAACAAAGGTGTGACTGATCCTAACAA
TGGACTTGTTTATAAGAGCCTTTTCGAAGCTCAAATTGATGCTGTTTATGCTGCAATGAA
AGCTTTGAATTTCGATGATGTAAAAATGGAGATTACTGAAACTGGATGGCCTTCAAAAGG
CGATGAAAACGAGACTGGTGCAAGTACTGAAAATGCTGCAGCTTACAACGGTAATCTGGT
AAAAAGAGTACTTACTGGAAGTGGGACCCCTTTAAAGCCCGATGAACCTCTTAACGTCTA
TTTATTCGCTTTGTTCAATGAAAATCAAAAGCCCGGGCCCGTTTCAGAACGGAACTACGG
GCTTTTCTATCCTAGTAAAGAAAAGGTTTACGATATTACGCTTACTCTAGAAGGTTTAGA
GGCTGGGGTTAATAACGGAAGTAAAAGCCAGGTGGTGAAGATTCCGGTACCGTCTCCGTC
GTCGTCGCCGTCTCCAGCGCCGGTTGTTGGCGGCGGTGTGGAGGAGAGTAAGGTGGTGAA
CACGTGGTGTGTGGCGAATGAGAAAGCTGGGGCGGAGAAGCTGCAAGCGGCGCTGGATTA
TGCTTGTGGAGAAGGAGGAGCTGATTGTCGTCCGATTCAGCCGGGTGCCACGTGTCATAA
TCCTGATACACTTGAAGCACATGCTTCTTATGCGTTCAATAGTTATTATCAGAAGAAAGC
ACGTGGGACTGGCACCTGTGATTTCAAAGGAGCAGCTTATGTCGTCACTCAACATCCTAA
ATATGGCAGTTGCAAGTTTCCAACAGGATATTAAATTGAGGAAGATTGGTTAAGGAGTTT
AGAATGAAAATGGTTTTAGTTACTTGATGTCCACATTCTTTTTTCCTTTTGTTATTATTT
GTTAGTATATAATTCATAGGTGGTTATGATTATTTTTGAAGTTTTCTTTGTAATTATACC
TACTTTTCGTTTTTTTAATTAAATGGAGGTGAATTATTTTAGAATAAAAACAAAACACTA
TTTTCAAAATTTTATTACTCAACAATGGTGAAGTGTGAGTAAAAGG