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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g014410.2.1
CDS Infomation

Ribonuclease 3-like protein 2 (AHRD V3.3 *** A0A061F5X1_THECC)
Sequence

ATGCAGTTCATTCAAAGTACTGACAAATCACTTTTTCTGCACAATCATCATCAAAACAGA
GTACCGCTGACCCACCGGATTATGATGGAGTCACCGGAATCTTGCGTCATTCTGACAAAT
CCAATCAATAAGAGCATCGCATTAATTCCCGACGATGACTATATCATCACAGATATGGCG
GCATCCATAAGGGCAGTTGAGGAGATTTTAGACTACAATTTTAAGAATAAGAAACTTCTC
GAACAAGCTCTTACGCACTCTTCCTGCACCGATTCTCCGTCGTATCAACGCCTTGAGTTC
GTCGGCGATGCTGCTCTTGGCTTAGCTATATCGAATTTTGTTTATTTGACTTACCCTGAA
CTTGACCCTGGGCAACTCTCTCTCCTCCGCTCTGCTAATGTTAGCACTGAAAAGCTTGCG
AGAGTCGCCGTTAAGCACTCTCTTTATAAATTTGTTCGCCACAACACTACTACCCTCGAT
GAAAAGGTGAAGGAATTCGTGATAGCAGTAGAACAGGAGGAGGAGGCGGAGGTACACGGA
GGAGTAATGAAGGCCCCGAAGGTACTGGCTGATATTGTGGAGTCAGTGGTGGCAGCTGTA
TATGTGGATATGCACTTTGATCTGAAGCTTCTCTGGAAGAAAATTAATCGCCTCCTCGAG
CCGATTATCACACTGGACTTGCTTGCACAACAACCACAGCCTGTAACTATGCTGTATGAG
CTTTGCCAGAAGGACGGGAAACATGTTGATATAAAGCATTGGAGAAAAGAAGAGAAAGAC
ATAGCTAGTGTTTATGTTGATGGTCAATTTGTTGTTTCCGCTACTTCTGAGAACAAGGAA
AATGCTAAACTTCACGCTGCAAAGTCTGCAATCACAAAGTTGGCCTGTAATCATACTAGT
AAGCTGGATCTTGAAGTCGAACCAAACACTGAGTTTGGAGGAGCAAAGCAGAAGCTGAAT
GAGCTATGTGGAAGAAAGAAATGGCCCGCTCCAACTTACAGAATTGAGAAACAGGTAGGC
CCTTCTCATGATAGGAGGTTTATTTGTTCAGTGCAAGTTGCAGTAGCTAAAGGCGTGGTT
TTTGTGATGGGAGATGAGAAGACGCGTGTAAAAGATGCAGAGAATTCTGCTGCATCAGCC
ATGATTTGGGGTCTGCAAGGTTCCAATCTCAGTTAG

Peptide Sequence

PEP ID

Solyc12g014410.2.1
PEP Infomation

Ribonuclease 3-like protein 2 (AHRD V3.3 *** A0A061F5X1_THECC)
Sequence

MQFIQSTDKSLFLHNHHQNRVPLTHRIMMESPESCVILTNPINKSIALIPDDDYIITDMA
ASIRAVEEILDYNFKNKKLLEQALTHSSCTDSPSYQRLEFVGDAALGLAISNFVYLTYPE
LDPGQLSLLRSANVSTEKLARVAVKHSLYKFVRHNTTTLDEKVKEFVIAVEQEEEAEVHG
GVMKAPKVLADIVESVVAAVYVDMHFDLKLLWKKINRLLEPIITLDLLAQQPQPVTMLYE
LCQKDGKHVDIKHWRKEEKDIASVYVDGQFVVSATSENKENAKLHAAKSAITKLACNHTS
KLDLEVEPNTEFGGAKQKLNELCGRKKWPAPTYRIEKQVGPSHDRRFICSVQVAVAKGVV
FVMGDEKTRVKDAENSAASAMIWGLQGSNLS*

Transcript Sequence

Transcript ID

Solyc12g014410.2.1
Transcript Infomation

Ribonuclease 3-like protein 2 (AHRD V3.3 *** A0A061F5X1_THECC)
Sequence

CCTATAAATTGAGACGAAAAAATACCCCAAAGTTACAATTCAATCAAACATTGGTCTTTC
CCCCTAAAATCCTAAAAACCCTCTCCTTTTTACAATGCAGTTCATTCAAAGTACTGACAA
ATCACTTTTTCTGCACAATCATCATCAAAACAGAGTACCGCTGACCCACCGGATTATGAT
GGAGTCACCGGAATCTTGCGTCATTCTGACAAATCCAATCAATAAGAGCATCGCATTAAT
TCCCGACGATGACTATATCATCACAGATATGGCGGCATCCATAAGGGCAGTTGAGGAGAT
TTTAGACTACAATTTTAAGAATAAGAAACTTCTCGAACAAGCTCTTACGCACTCTTCCTG
CACCGATTCTCCGTCGTATCAACGCCTTGAGTTCGTCGGCGATGCTGCTCTTGGCTTAGC
TATATCGAATTTTGTTTATTTGACTTACCCTGAACTTGACCCTGGGCAACTCTCTCTCCT
CCGCTCTGCTAATGTTAGCACTGAAAAGCTTGCGAGAGTCGCCGTTAAGCACTCTCTTTA
TAAATTTGTTCGCCACAACACTACTACCCTCGATGAAAAGGTGAAGGAATTCGTGATAGC
AGTAGAACAGGAGGAGGAGGCGGAGGTACACGGAGGAGTAATGAAGGCCCCGAAGGTACT
GGCTGATATTGTGGAGTCAGTGGTGGCAGCTGTATATGTGGATATGCACTTTGATCTGAA
GCTTCTCTGGAAGAAAATTAATCGCCTCCTCGAGCCGATTATCACACTGGACTTGCTTGC
ACAACAACCACAGCCTGTAACTATGCTGTATGAGCTTTGCCAGAAGGACGGGAAACATGT
TGATATAAAGCATTGGAGAAAAGAAGAGAAAGACATAGCTAGTGTTTATGTTGATGGTCA
ATTTGTTGTTTCCGCTACTTCTGAGAACAAGGAAAATGCTAAACTTCACGCTGCAAAGTC
TGCAATCACAAAGTTGGCCTGTAATCATACTAGTAAGCTGGATCTTGAAGTCGAACCAAA
CACTGAGTTTGGAGGAGCAAAGCAGAAGCTGAATGAGCTATGTGGAAGAAAGAAATGGCC
CGCTCCAACTTACAGAATTGAGAAACAGGTAGGCCCTTCTCATGATAGGAGGTTTATTTG
TTCAGTGCAAGTTGCAGTAGCTAAAGGCGTGGTTTTTGTGATGGGAGATGAGAAGACGCG
TGTAAAAGATGCAGAGAATTCTGCTGCATCAGCCATGATTTGGGGTCTGCAAGGTTCCAA
TCTCAGTTAGACGCATATTATGGATTGTACTTATTTAATAATTGCGTATTTGAGCTAGGG
AATGGTGTATAATATGTCTTGTTAGTGGTTTGTATGATTTGAAATTCATGACAGTGATGA
AATATTATTGTAGTTCTCATCATATCAGGAAAGACAGATTGTCATAGCTGTAGTGATAAA
TTGATGCATAAGGGATGACACCTTTAAATTATGTAAAAGATGTTTGGATGGATCATTCAG
TATAATTATATGATATTTTGGCCAATAATGTGAAGAAGATTTATATAGTTCTTGTGTGTT
TTTTTCCATAGTAAAATAAAACCAATGGAGGAAGCAAAGCTTCTACTTCTTTTAATCTAT
TTTTCTCTGTTTGTCTGTATTCTGTATCCTTGAAAAATTAAGCTAGTTAGGAGTT