Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g014190.2.1
CDS Infomation

tRNA isopentenyltransferase (AHRD V3.3 *** A0A103Y4A0_CYNCS)
Sequence

ATGATAAGCACCGTCGGGACGGGTGGCGTTCGAATAAGCAGCTATCTCCGGCTTCCGTAC
ACGGTGGAGACACTTCTCCGCCGCCGCCGTCTCTTCACCTCATGCTCTGCCTCCTCTACC
AAAGAGAAAGTTATTGTCATTTCCGGACCTACCGGTGCCGGAAAAAGCAAGCTAGCATTA
GAGCTCGCTAAGCGAATCAATGGCGAAATCATCAGTGCAGACTCTGTACAGGTGTATCGA
GGGCTTGATGTCGGTTCAGCAAAGCCTTCCTTTGATGAACGAAAGGAAGTAGTACATCAT
CTGGTTGACATATTGCATCCATCCGAAGATTATTCTGTTGGACAATTTTTTGAGGATGCT
AGGCAAACTACCAGAGATATCCTTGATAGGGGCCGTGTTCCAATAGTCGCGGGTGGTACT
GGATTATATTTGCGATGGTTTATTTATGGGAGGCCAGATGTTCCAAAAGCCTCTCGAGAG
ATTGCTGCTGAAGTCGACTCAGAGCTTGCAAGTTTACAGAATGATGAGGACTGGAATGCT
GCTGTTCAGTTGTTGGTTAAAGCTGGTGATCCCGGTGCCCAGTCTTTACCGGCAAATGAT
TGGTATCGCTTGCGTCGCAGGCTTGAAATTGTTAAGTCTACTGGGTCGCCTCCATCAGCT
TTTGAAGTACCATATAATTCTTTCAGAGAACAGCTCGTATCAGGTCAAATAGATGCTGCT
GATGTCAAGACTTCAGATGACAAATTGCAGCAGAATGAAATAAAGGATTTGGATTATGAT
TTTCTTTGTTATTTCCTTTCCACCAGTAGGATAGATCTCTATAGATCAATTGATTTTCGG
TGTGAAGATATGCTCTTAGGAGCAGATGGAATTCTATCTGAGGCCAGGTGGCTTCTTGAT
GTGGGTCTTTTGCCGAACTCGAATTCTGCTACTCGGGCAATTGGTTACCGACAAGCAATG
GAATACCTTCTAAGGTGTAGGGAAGATGGAGGATGGAGTTCTGCTGGGGACTTCCATGAT
TTTTTATCTGAATTTCAGAAAGAATCACGAAATTTTGCAAAAAGGCAGATGACATGGTTT
CGCAATGAACAGATTTATGAGTGGATAGATGCTTCTAAACCTTTGGAAAAGGTTCTTAGC
TTCATATGTGATTCATATAACAGTCAGGATGGCCATCTCCAGATGCCCGAGTCACTTCGT
ATGCGGAAAGATATAAGAAATCACCGTCAAGCTGCAGTATTGAAGACCTATCGTACAATA
AACAGGCATTTCATTGGGCATGAAGATTGTGTGGATGTTCTGGACTGGATAAAGAAGATA
TATGGCCAACCTACTGACTCTCTTTGTTAA

Peptide Sequence

PEP ID

Solyc12g014190.2.1
PEP Infomation

tRNA isopentenyltransferase (AHRD V3.3 *** A0A103Y4A0_CYNCS)
Sequence

MISTVGTGGVRISSYLRLPYTVETLLRRRRLFTSCSASSTKEKVIVISGPTGAGKSKLAL
ELAKRINGEIISADSVQVYRGLDVGSAKPSFDERKEVVHHLVDILHPSEDYSVGQFFEDA
RQTTRDILDRGRVPIVAGGTGLYLRWFIYGRPDVPKASREIAAEVDSELASLQNDEDWNA
AVQLLVKAGDPGAQSLPANDWYRLRRRLEIVKSTGSPPSAFEVPYNSFREQLVSGQIDAA
DVKTSDDKLQQNEIKDLDYDFLCYFLSTSRIDLYRSIDFRCEDMLLGADGILSEARWLLD
VGLLPNSNSATRAIGYRQAMEYLLRCREDGGWSSAGDFHDFLSEFQKESRNFAKRQMTWF
RNEQIYEWIDASKPLEKVLSFICDSYNSQDGHLQMPESLRMRKDIRNHRQAAVLKTYRTI
NRHFIGHEDCVDVLDWIKKIYGQPTDSLC*

Transcript Sequence

Transcript ID

Solyc12g014190.2.1
Transcript Infomation

tRNA isopentenyltransferase (AHRD V3.3 *** A0A103Y4A0_CYNCS)
Sequence

AAAAATTCACTTAATAAACTATAGTTAAAAAAAGACTTTGGCTCCTCTCCGGTAGCCAAT
CGGTCCAGTTGCTCCAGTCATGATAAGCACCGTCGGGACGGGTGGCGTTCGAATAAGCAG
CTATCTCCGGCTTCCGTACACGGTGGAGACACTTCTCCGCCGCCGCCGTCTCTTCACCTC
ATGCTCTGCCTCCTCTACCAAAGAGAAAGTTATTGTCATTTCCGGACCTACCGGTGCCGG
AAAAAGCAAGCTAGCATTAGAGCTCGCTAAGCGAATCAATGGCGAAATCATCAGTGCAGA
CTCTGTACAGGTGTATCGAGGGCTTGATGTCGGTTCAGCAAAGCCTTCCTTTGATGAACG
AAAGGAAGTAGTACATCATCTGGTTGACATATTGCATCCATCCGAAGATTATTCTGTTGG
ACAATTTTTTGAGGATGCTAGGCAAACTACCAGAGATATCCTTGATAGGGGCCGTGTTCC
AATAGTCGCGGGTGGTACTGGATTATATTTGCGATGGTTTATTTATGGGAGGCCAGATGT
TCCAAAAGCCTCTCGAGAGATTGCTGCTGAAGTCGACTCAGAGCTTGCAAGTTTACAGAA
TGATGAGGACTGGAATGCTGCTGTTCAGTTGTTGGTTAAAGCTGGTGATCCCGGTGCCCA
GTCTTTACCGGCAAATGATTGGTATCGCTTGCGTCGCAGGCTTGAAATTGTTAAGTCTAC
TGGGTCGCCTCCATCAGCTTTTGAAGTACCATATAATTCTTTCAGAGAACAGCTCGTATC
AGGTCAAATAGATGCTGCTGATGTCAAGACTTCAGATGACAAATTGCAGCAGAATGAAAT
AAAGGATTTGGATTATGATTTTCTTTGTTATTTCCTTTCCACCAGTAGGATAGATCTCTA
TAGATCAATTGATTTTCGGTGTGAAGATATGCTCTTAGGAGCAGATGGAATTCTATCTGA
GGCCAGGTGGCTTCTTGATGTGGGTCTTTTGCCGAACTCGAATTCTGCTACTCGGGCAAT
TGGTTACCGACAAGCAATGGAATACCTTCTAAGGTGTAGGGAAGATGGAGGATGGAGTTC
TGCTGGGGACTTCCATGATTTTTTATCTGAATTTCAGAAAGAATCACGAAATTTTGCAAA
AAGGCAGATGACATGGTTTCGCAATGAACAGATTTATGAGTGGATAGATGCTTCTAAACC
TTTGGAAAAGGTTCTTAGCTTCATATGTGATTCATATAACAGTCAGGATGGCCATCTCCA
GATGCCCGAGTCACTTCGTATGCGGAAAGATATAAGAAATCACCGTCAAGCTGCAGTATT
GAAGACCTATCGTACAATAAACAGGCATTTCATTGGGCATGAAGATTGTGTGGATGTTCT
GGACTGGATAAAGAAGATATATGGCCAACCTACTGACTCTCTTTGTTAACGAACATCTAA
GGGACTTTGTCTTTCACTTCAAGTTGTCAAAATCAAAACATCCAAAAGTTGTTCTCGTTG
TTATCGAGATTTGATTGCTACTTTTCCCTTAAAATTTGGATCGTTTACTAGAGAGTTCTC
TTTCTCTATCTCTATAGTATTGCGAAGGTTGAAGTTGTTACAATTGAAGAGGGTAATGAG
GCCGTCAAGCTGTGGCTGGGGAATGTCAATCTGCATCTATGAAATTTTGTACATGTAGGA
GTCTGTTCAAGAGCTTTATTTGCCAGAACATACATTTTCCGCGAGGATGTTGCTCGAATA
CTGTATATTCATTTCGAATGTCTCACTCCCATCAAACACATCGCTGGCATCACACTCCGA
TGCATTTCTTAGATGTATTTATATGCATTTTACATTTGTCTCGCATAATTGATACAAGTT
GTGTGAGGTTCTCTTTTTGTTTCACAAATTGGTGGACTCAAAGTTTGTACCAAAAAAAGT
GTAAAGAATTGGGTTCACTAACTTGTAAAACAAAAAGTATAACTTGTGTTTTGCTGTATG
AGGCATAAAAATAAATGTTCTCGATATCATAAAGATGAGAACTTGGTCG