Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g014110.2.1
CDS Infomation

sodium/calcium exchanger family protein / calcium-binding EF hand family protein (AHRD V3.3 *** AT1G53210.1)
Sequence

ATGACTCTTAAACTATTTTTTCTCGCTCTCTTCCTTCTATTGGTCTTCTCCGGCGCCGTT
TACGGTCGCCGTTTCATCAGTGACGACTCCGCTGGAGTAATTTCCGATGGAGTTCACAGT
GAGATCGGTCGGGATTTGGAAATTCTCCGGCTGGATCGGAATTTCGCCGGAGGTGAAGAG
GAGAGTTGTGAACAGAGTTATGGATTTCTGCCTTGTACTAAAACTGCTCTTGGAAATGTT
TTTCTCATTTTGGTTTATGGTTACCTTATGTTCCTTGGTGCTACGTATCTCTCTTCTGGT
AGTGAACTGTTGCTTGAGATTTTAGGGCCTGGTATTATTGGGGGACTTTTTCTTCCTGTG
CTTGGTGCTCTTCCAGATGCTATGCTTATTCTCGTATCGGGGATATCTGGAAGTACTGCA
GCTGCTCAGAGCCAGGTCTCTGTAGGAATGGGATTGCTAGCTGGGTCAACTGTGATGCTT
ATAACTGTTATTTGGGGAACCTGTTGCATTGTTGGCAAGTGCGACATACAAAATTCTGTT
GCTGTAGACATGAAAGACACTAACGGATTCAGCTTGACGGGTTCTGGTGTTAGTACTGAC
ATCTGGACAAGCCATGCTGCAACGATAATGGCAGCATCTGTAACACCATTTCTTGTTGTC
CAACTGCCACAGCTCCTCCATTCAACTTCAGGAAGACATTTATCTGTCTTGATTGGTCTT
ATCATTTCACTTACTCTGCTTGTTTCTTATTGCATCTATCAGGTCTTTCAGCCTTGGATA
CAGAGTAGACGTCTTGCTTATGTAAAACATAAACATGTTATATCAGGAGTTTTGAGACAG
TTAAGAATGCGTGCATTGGGGAGGCTTTGCACAGACCAGGGAGCACCAAATATAGAAGTT
TTAGAAAAGCTATTCAACGCAATTGATGAAAATGAGGATGGGCATCTTTCCCGTACTGAA
TTAAAAGCTCTGGTAGTAGGAATCCGTTTGGAGGAGATAAACTTACATGAGAATGATGCT
GTAGAAAAACTGATGAAGGACTTCGATACTTCACATGATCATCAAGTTGAAATGTCCGAG
TTCATTGCTGGAGTTACAAAATGGCTTACTGAGGCCAGGGGTTCCGAGGCTCCTTCTCCT
GAAGCTGGTCCTGATACAATGAAGTACCTCGATGACTTGCATGAGCAAACAAGGAGAGAA
CACCATTTCTTAGGGGATCAAAGTGACGAAAGTGTTGAGACTGTTGAGAATCCTAGATCA
ACTGCAATTAAGGCTGTTCTACTGCTTTTGCTGGGTACTGTCATTGCTGCCGTCTTTGCT
GATCCTCTGGTTGATGCTGTCAATAATTTCTCTAGTGCCACAAGCATTCCTTCTTTCTTC
ATCTCATTCATTGCTCTGCCACTGGCGACCAACTCCAGTGAGGCGGTGTCAGCTATTATC
TTTGCTAGCCGGAAAAAGTTGAGATCTGCATCATTAACATTTTCTGAGTTGTATGGAGCA
GTGACAATGAACAATCTCCTTTGTCTATCAGTCTTCCTGGCTCTCGTCTATATCAGAGGA
TTGACATGGGACTTCTCGTCTGAAGTCTTGGTTATTCTAATTGTCTGTGTTGTCGTGGGG
GTCTTTGCAAGCGTCCGAAGCACCTTTCCTCTTTGGACTTCCTTGCTAGCTTTTCTACTT
TACCCCTTCTCTCTCGTACTTGTATATGTTCTTGACTACAAATTTGGTTGGTCTTAG

Peptide Sequence

PEP ID

Solyc12g014110.2.1
PEP Infomation

sodium/calcium exchanger family protein / calcium-binding EF hand family protein (AHRD V3.3 *** AT1G53210.1)
Sequence

MTLKLFFLALFLLLVFSGAVYGRRFISDDSAGVISDGVHSEIGRDLEILRLDRNFAGGEE
ESCEQSYGFLPCTKTALGNVFLILVYGYLMFLGATYLSSGSELLLEILGPGIIGGLFLPV
LGALPDAMLILVSGISGSTAAAQSQVSVGMGLLAGSTVMLITVIWGTCCIVGKCDIQNSV
AVDMKDTNGFSLTGSGVSTDIWTSHAATIMAASVTPFLVVQLPQLLHSTSGRHLSVLIGL
IISLTLLVSYCIYQVFQPWIQSRRLAYVKHKHVISGVLRQLRMRALGRLCTDQGAPNIEV
LEKLFNAIDENEDGHLSRTELKALVVGIRLEEINLHENDAVEKLMKDFDTSHDHQVEMSE
FIAGVTKWLTEARGSEAPSPEAGPDTMKYLDDLHEQTRREHHFLGDQSDESVETVENPRS
TAIKAVLLLLLGTVIAAVFADPLVDAVNNFSSATSIPSFFISFIALPLATNSSEAVSAII
FASRKKLRSASLTFSELYGAVTMNNLLCLSVFLALVYIRGLTWDFSSEVLVILIVCVVVG
VFASVRSTFPLWTSLLAFLLYPFSLVLVYVLDYKFGWS*

Transcript Sequence

Transcript ID

Solyc12g014110.2.1
Transcript Infomation

sodium/calcium exchanger family protein / calcium-binding EF hand family protein (AHRD V3.3 *** AT1G53210.1)
Sequence

TTTTCTTTTCAACCTAAATATTGGTACAAACATGTATTTTCAGTACCAAAGACCGAAACT
CCCGCATTTCTCATGCGAAAAACAAGTACGTAAAATTCATTTTCAGAAAAGCTCCAAAAC
TCCGATGGCATCTCTGGCCTTTACTGAATTATTTATTCAAAAAAAACAAATAATGATTCA
AATTAATAAATAATTTAGTGAACCGACTCCAATTTTTCACTCTCAAAATTTCATAAATCA
TGTTTTTGTAATCACTTTAGCATCATAATTACGAAAAAATGACTCTTAAACTATTTTTTC
TCGCTCTCTTCCTTCTATTGGTCTTCTCCGGCGCCGTTTACGGTCGCCGTTTCATCAGTG
ACGACTCCGCTGGAGTAATTTCCGATGGAGTTCACAGTGAGATCGGTCGGGATTTGGAAA
TTCTCCGGCTGGATCGGAATTTCGCCGGAGGTGAAGAGGAGAGTTGTGAACAGAGTTATG
GATTTCTGCCTTGTACTAAAACTGCTCTTGGAAATGTTTTTCTCATTTTGGTTTATGGTT
ACCTTATGTTCCTTGGTGCTACGTATCTCTCTTCTGGTAGTGAACTGTTGCTTGAGATTT
TAGGGCCTGGTATTATTGGGGGACTTTTTCTTCCTGTGCTTGGTGCTCTTCCAGATGCTA
TGCTTATTCTCGTATCGGGGATATCTGGAAGTACTGCAGCTGCTCAGAGCCAGGTCTCTG
TAGGAATGGGATTGCTAGCTGGGTCAACTGTGATGCTTATAACTGTTATTTGGGGAACCT
GTTGCATTGTTGGCAAGTGCGACATACAAAATTCTGTTGCTGTAGACATGAAAGACACTA
ACGGATTCAGCTTGACGGGTTCTGGTGTTAGTACTGACATCTGGACAAGCCATGCTGCAA
CGATAATGGCAGCATCTGTAACACCATTTCTTGTTGTCCAACTGCCACAGCTCCTCCATT
CAACTTCAGGAAGACATTTATCTGTCTTGATTGGTCTTATCATTTCACTTACTCTGCTTG
TTTCTTATTGCATCTATCAGGTCTTTCAGCCTTGGATACAGAGTAGACGTCTTGCTTATG
TAAAACATAAACATGTTATATCAGGAGTTTTGAGACAGTTAAGAATGCGTGCATTGGGGA
GGCTTTGCACAGACCAGGGAGCACCAAATATAGAAGTTTTAGAAAAGCTATTCAACGCAA
TTGATGAAAATGAGGATGGGCATCTTTCCCGTACTGAATTAAAAGCTCTGGTAGTAGGAA
TCCGTTTGGAGGAGATAAACTTACATGAGAATGATGCTGTAGAAAAACTGATGAAGGACT
TCGATACTTCACATGATCATCAAGTTGAAATGTCCGAGTTCATTGCTGGAGTTACAAAAT
GGCTTACTGAGGCCAGGGGTTCCGAGGCTCCTTCTCCTGAAGCTGGTCCTGATACAATGA
AGTACCTCGATGACTTGCATGAGCAAACAAGGAGAGAACACCATTTCTTAGGGGATCAAA
GTGACGAAAGTGTTGAGACTGTTGAGAATCCTAGATCAACTGCAATTAAGGCTGTTCTAC
TGCTTTTGCTGGGTACTGTCATTGCTGCCGTCTTTGCTGATCCTCTGGTTGATGCTGTCA
ATAATTTCTCTAGTGCCACAAGCATTCCTTCTTTCTTCATCTCATTCATTGCTCTGCCAC
TGGCGACCAACTCCAGTGAGGCGGTGTCAGCTATTATCTTTGCTAGCCGGAAAAAGTTGA
GATCTGCATCATTAACATTTTCTGAGTTGTATGGAGCAGTGACAATGAACAATCTCCTTT
GTCTATCAGTCTTCCTGGCTCTCGTCTATATCAGAGGATTGACATGGGACTTCTCGTCTG
AAGTCTTGGTTATTCTAATTGTCTGTGTTGTCGTGGGGGTCTTTGCAAGCGTCCGAAGCA
CCTTTCCTCTTTGGACTTCCTTGCTAGCTTTTCTACTTTACCCCTTCTCTCTCGTACTTG
TATATGTTCTTGACTACAAATTTGGTTGGTCTTAGTCTTGGACGACTCTTTTTGTTGAAC
TTGTATGCATCTTTTGAGCTACGGCACACTTTAGTCGCTCTTGGATTTTCTAGTAGAACT
TCAGTAACTTGAAAACTGAAGTCATTTGTTTACTTACAATTTCCCACTGCTGTTTATTGG
TTACAGGTTTTGAGTGTTCTCTCTAGTCTCTAGTCAATCATCTCATTATTGTTGAGCAGA
CTGCTTCTGCGCTTCCATTTATCTCTTTAAAAGTTCTGATGTACTTCTCTGCTAAGCACA
CT