Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc12g013990.2.1
CDS Infomation	Protein kinase, putative (AHRD V3.3 - B9SRD1_RICCO)
Sequence	ATGAATGAAGCACTCAAGCAGAACCGACTCTTGAAAGAGCAAGAAGAAAATAGTTCATAT CATCATGCCTCGACCAACAGAGATGGTGCTTCAGATCTGAAAAAGATGGAGCAGATAAGT TCACAGAGATCAATGTCATTACCCTCATCTCCCCACGAGTTGAGGAGACAGGTTCCAGAA AGAAGTGGGCCAGACAGGATGAATGATGAATTGGTCTCAACCTGGAACAGGATTCTAGAA TCACATATGTATCTGAATAAGCCTCTTCTACCTTATGAAGAATGGAACATAGACTTCTCA GAGTTGACTGTTGGCACTCGAGTTGGGATAGGGTTCTTTGGAGAAGTTTTTCGTGGCAAG TGGAATGGAACTGAGGTTGCTATTAAAGTTTTTCTGGAGCAAGATCTTACTGCTGAAAAT ATGGAGGACTTCTGCAATGAGATCTCTATCCTTAGGTTTATATTGTTCCTGGGTGCCTGT GCAAACCCCCCACATTTATCAATGGTTACTGAATACATGGAGATGGGATCTCTATATCAT TTGATCCATGTGAGTGGTCAAAAGAACAGGCTTAGCTGGAAGAAGAAGCTCAATATGCTC CGGGATATATGCAGAGGGCTCATGTGCTTACATCGAATGAAGATTGTCCATCGTGATTTA AAAAGTGCAAACTGCCTTGTGAATAAGCGCTGGACTGTCAAAATTTGTGATTTTGGCCTC TCAAGAATAATGACAGATGCATCTATAAGAGACTCAACGTCTGCTGGCACTCCAGAATGG ATGGCTCCAGAACTCATTCGTAATGAACCTTTCACAGAAAAATGTGACATTTTTAGCTTT GGTGTGATAATGTGGGAGCTTTGTACCCTAAACAGACCATGGGAGGGTATACCACCTGAT CGGGTCGTTTATGCTGTTGCCAATGAAGGATCAAGGTTAGAGATACCTGAAGGACCCCTC GGCAAACTAATAGCAGCCTTCAAACTACTCTACCAAGCTCGTCGTCACTGTTCATACAGA AGCCCATCTCACTTTTCTCCTACTTTCCGTTCTCATTTGCACAGATTTCTCTCTTCCTCA TCATCATCAGAAAACCCGAATTCGAATAACCCAAGTTCAATTCAACCCGTTTCCTACACC CCTAAGAACCCGCCAGAGAGTAGTAGCCGACCCGAATCAAATAACCCAGATGGGGTTAAA GCGGATGGTGGGTTGTGGACCCGGGAGGATCTGCGGTACTTGAAGGATACCCCGAAAATA GCTCCGATTTCTTATCCGACAAGGGTAGCGCCGTTACCGGAGGATTTGCCGGAAGAGGAG AAAGGGAAAATGGAAGGTATGGGTGATGAGATGGAGAGAGAGAGGAGAAGAATCGAGGCG CAAAAACGGGCGGCAATGAGGAGAGTTATGAATGCTGAAGAGGAAATGATTTCGTTTCCA ACATTGATTAATGTGAAGAGTGATGAAAAGAAGAAAAAAGCTGTTTATGATCTTAAAGAG GCCATTCGGCTTGTAAAGGCTAATGCCAAGAAGAAATTTGATGAAACTCTGGAAGCTCAT GTTGTTTTGACTCCTGATATGCGTCGAAGTGATCTGAAACTTGAAGGTACAGTGGCTGTT CCTCATGGGTTTGGAAAGGTATATCGGATTGCTGTTTTTGCTGAAGGAGCTGCTGCTGAT GAAGCCCGAGAAGCAGGGGCTGATGTTGTTGGTGGTTTGGAGCTCATAGAGAACATCAAG AGTGGAAATGTGAAGATTGATTTTGACAAATGTTTTTCCACTCATGCAATGATGCCGAAC TTGAGACAGATTGCGAAGTACTTGAGGCAGTTGATGCCAGATACTAAGAAAGGTACTGTT ACCAAAGATATAACAAAAGCAGTGAAAGAAGCTAAGCGAGGTGTACCGTTCAAAAAAGAT AAAACTGCAATTGTGCATGTAGGAATTGGGAAGGTAAGTTTTCAAGAAGAGGCATTGTGT GAAAACATTGGTGCATTTGTACATGAACTTTTGCGTCAGAAGCCTGCTGGTCTAAAAAAG AGCTCAAAATATGCTGGTTATGTGAATACAGTCCATCTCTGCAGTACGATGGGTCCATCA TTTCCTGTTACAATACAGTCGTTATCGATTGCAGCAGACCGCCATGCAAGGAAGTATGTT CAATGA

Peptide Sequence

PEP ID	Solyc12g013990.2.1
PEP Infomation	Protein kinase, putative (AHRD V3.3 - B9SRD1_RICCO)
Sequence	MNEALKQNRLLKEQEENSSYHHASTNRDGASDLKKMEQISSQRSMSLPSSPHELRRQVPE RSGPDRMNDELVSTWNRILESHMYLNKPLLPYEEWNIDFSELTVGTRVGIGFFGEVFRGK WNGTEVAIKVFLEQDLTAENMEDFCNEISILRFILFLGACANPPHLSMVTEYMEMGSLYH LIHVSGQKNRLSWKKKLNMLRDICRGLMCLHRMKIVHRDLKSANCLVNKRWTVKICDFGL SRIMTDASIRDSTSAGTPEWMAPELIRNEPFTEKCDIFSFGVIMWELCTLNRPWEGIPPD RVVYAVANEGSRLEIPEGPLGKLIAAFKLLYQARRHCSYRSPSHFSPTFRSHLHRFLSSS SSSENPNSNNPSSIQPVSYTPKNPPESSSRPESNNPDGVKADGGLWTREDLRYLKDTPKI APISYPTRVAPLPEDLPEEEKGKMEGMGDEMERERRRIEAQKRAAMRRVMNAEEEMISFP TLINVKSDEKKKKAVYDLKEAIRLVKANAKKKFDETLEAHVVLTPDMRRSDLKLEGTVAV PHGFGKVYRIAVFAEGAAADEAREAGADVVGGLELIENIKSGNVKIDFDKCFSTHAMMPN LRQIAKYLRQLMPDTKKGTVTKDITKAVKEAKRGVPFKKDKTAIVHVGIGKVSFQEEALC ENIGAFVHELLRQKPAGLKKSSKYAGYVNTVHLCSTMGPSFPVTIQSLSIAADRHARKYV Q*

Transcript Sequence

Transcript ID	Solyc12g013990.2.1
Transcript Infomation	Protein kinase, putative (AHRD V3.3 - B9SRD1_RICCO)
Sequence	ATGAATGAAGCACTCAAGCAGAACCGACTCTTGAAAGAGCAAGAAGAAAATAGTTCATAT CATCATGCCTCGACCAACAGAGATGGTGCTTCAGATCTGAAAAAGATGGAGCAGATAAGT TCACAGAGATCAATGTCATTACCCTCATCTCCCCACGAGTTGAGGAGACAGGTTCCAGAA AGAAGTGGGCCAGACAGGATGAATGATGAATTGGTCTCAACCTGGAACAGGATTCTAGAA TCACATATGTATCTGAATAAGCCTCTTCTACCTTATGAAGAATGGAACATAGACTTCTCA GAGTTGACTGTTGGCACTCGAGTTGGGATAGGGTTCTTTGGAGAAGTTTTTCGTGGCAAG TGGAATGGAACTGAGGTTGCTATTAAAGTTTTTCTGGAGCAAGATCTTACTGCTGAAAAT ATGGAGGACTTCTGCAATGAGATCTCTATCCTTAGGTTTATATTGTTCCTGGGTGCCTGT GCAAACCCCCCACATTTATCAATGGTTACTGAATACATGGAGATGGGATCTCTATATCAT TTGATCCATGTGAGTGGTCAAAAGAACAGGCTTAGCTGGAAGAAGAAGCTCAATATGCTC CGGGATATATGCAGAGGGCTCATGTGCTTACATCGAATGAAGATTGTCCATCGTGATTTA AAAAGTGCAAACTGCCTTGTGAATAAGCGCTGGACTGTCAAAATTTGTGATTTTGGCCTC TCAAGAATAATGACAGATGCATCTATAAGAGACTCAACGTCTGCTGGCACTCCAGAATGG ATGGCTCCAGAACTCATTCGTAATGAACCTTTCACAGAAAAATGTGACATTTTTAGCTTT GGTGTGATAATGTGGGAGCTTTGTACCCTAAACAGACCATGGGAGGGTATACCACCTGAT CGGGTCGTTTATGCTGTTGCCAATGAAGGATCAAGGTTAGAGATACCTGAAGGACCCCTC GGCAAACTAATAGCAGCCTTCAAACTACTCTACCAAGCTCGTCGTCACTGTTCATACAGA AGCCCATCTCACTTTTCTCCTACTTTCCGTTCTCATTTGCACAGATTTCTCTCTTCCTCA TCATCATCAGAAAACCCGAATTCGAATAACCCAAGTTCAATTCAACCCGTTTCCTACACC CCTAAGAACCCGCCAGAGAGTAGTAGCCGACCCGAATCAAATAACCCAGATGGGGTTAAA GCGGATGGTGGGTTGTGGACCCGGGAGGATCTGCGGTACTTGAAGGATACCCCGAAAATA GCTCCGATTTCTTATCCGACAAGGGTAGCGCCGTTACCGGAGGATTTGCCGGAAGAGGAG AAAGGGAAAATGGAAGGTATGGGTGATGAGATGGAGAGAGAGAGGAGAAGAATCGAGGCG CAAAAACGGGCGGCAATGAGGAGAGTTATGAATGCTGAAGAGGAAATGATTTCGTTTCCA ACATTGATTAATGTGAAGAGTGATGAAAAGAAGAAAAAAGCTGTTTATGATCTTAAAGAG GCCATTCGGCTTGTAAAGGCTAATGCCAAGAAGAAATTTGATGAAACTCTGGAAGCTCAT GTTGTTTTGACTCCTGATATGCGTCGAAGTGATCTGAAACTTGAAGGTACAGTGGCTGTT CCTCATGGGTTTGGAAAGGTATATCGGATTGCTGTTTTTGCTGAAGGAGCTGCTGCTGAT GAAGCCCGAGAAGCAGGGGCTGATGTTGTTGGTGGTTTGGAGCTCATAGAGAACATCAAG AGTGGAAATGTGAAGATTGATTTTGACAAATGTTTTTCCACTCATGCAATGATGCCGAAC TTGAGACAGATTGCGAAGTACTTGAGGCAGTTGATGCCAGATACTAAGAAAGGTACTGTT ACCAAAGATATAACAAAAGCAGTGAAAGAAGCTAAGCGAGGTGTACCGTTCAAAAAAGAT AAAACTGCAATTGTGCATGTAGGAATTGGGAAGGTAAGTTTTCAAGAAGAGGCATTGTGT GAAAACATTGGTGCATTTGTACATGAACTTTTGCGTCAGAAGCCTGCTGGTCTAAAAAAG AGCTCAAAATATGCTGGTTATGTGAATACAGTCCATCTCTGCAGTACGATGGGTCCATCA TTTCCTGTTACAATACAGTCGTTATCGATTGCAGCAGACCGCCATGCAAGGAAGTATGTT CAATGATAGTATTTGAATAGAAGATCCAATTTTAACTTGATACCCTCTCTTAATAGATCC AATTTTAACTTGGTACTATGTTGTACTCATTTGTTTAAATTTCTTGATTTTCCCACATTA GAAAAAAGGTGTTTCCTAGTTATTTTTGTTTCTTCCCCTTTACTGTAATGATCTATGCCC AGCCCTCTGCTTGAAACCCCTTTTTAACTCAAAATTCACTACTGTTGCTTCACATTTTTA TTGTTCTGTCAGAGAAAATAAGTATGTTTTCTGTTCTGTG