Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g013950.2.1
CDS Infomation

Sec1 family domain-containing protein 2 (AHRD V3.3 *** W9RNR0_9ROSA)
Sequence

ATGGCTACGGTTGATGTGATCAAGTGCTGTATGGATTCCATTAGACAAATATCAGATGAA
ATTAGAGAAGCCATAGTTTATCTGGATGCAGGGTGTACCGAAAGCTTTGAATATGTTGGC
GCATTCTCTCTGTTTTTGGAGCTTGGTGCACATGCCATTTGCAGCTTGGAGAAAATGTCT
CCTCTTGATAAGGTGGTTGATTGGAATTCGACTTCTGGGCCTGCAAAGAAAATTGTTGTT
ATCACGTCACGTCTTCTAAGTGATGCACATAGATACATTTTACGTTGTCTGAGTGCATTT
CAGACTCTGCGCAGCTGTGCTATATTTACATGCATTTCAGAGACAGGTCACTCAGCATAT
CCTGAATCACCTTTAGGACCGGATGCATATCATGAATATGAATCTTTGCTTGTCCAAGAT
TATGAGGAGCTTGCCAGAAAGTTTCTGATGAACTCTAGCCATACCGGAGAAAGCATAGTA
AAGGAAAGTATGTCCGCTGAAGATGAAGGATGGTCACAATTAACCACCAGCGAAGAGGGG
CCTTTTAATTTCAGTTCTGTTGCAAGTGCACAAAATTCATATGAAGACAGTGTAATTGAC
CGGACAGATGTACGGAAAAAGTTGAAAGTTTCTGTGCATCATTTCCCTCTGGTCTTGTGT
CCTTTTTCACCTAGATTCTTTGTCTTGCCTTCAGAAGGATCAGTTGCCGAAGCGTACCTA
TCCGCTGAACATGATAACTCTATAAGCTTTGGGTTACCTTCAATAAGTACTGGGACAACT
GCTGATGGTGAGGATGTCCCTCCTGGGGCAACTCTTACCGCTCAATTTCTTTATCATCTG
GCGGCAAAGATGGACCTGAAACTTGAGATATTTTCCCTGGGTGATGTTTCAAAAACTGTT
GGAAAGCTTCTAACAGACATGTCAAGTCTTTATGATGTTGGTCGACGTAAGAGATCTGCA
GGGCTATTACTCATTGACCGCACTCTTGACCTTCTTACTCCATGCTGTCATGGGGATTCA
CTTGTGGATCAAATGTTTTCATCATTGCCTCACAGAGAACGGATGGCATCCTTAAGTCAA
GCTAAAAGCTCCCGAAGCCAGGTTAAACTAGGCCCTGCTTACTTACAGCGTTCACCCCTC
ACCGTACAGATACCACTCAATAATTTCCTAAGAGAGGATACTTCAAGTTCTTACAACTTT
CAGCTGGTGGAAAGCGTTGAAGCATTTCTCCGTGGTTGGAATTCAAGAGACTCAACTTCT
CAGATGGACGAGTTGGTGAATTTTAGCACTAAACCTAGTGGTGAAATGTCCACACAAGAT
TTTCAGAGTGACCTTCTTTGTGGTTCTTTCGTCTCTACGGAAAATTTTCATGGAACACCG
TACCTAGAAGCCATACTAGAGCGAAGATCAAAAGATGGGGCCGTGCTGATCAAGAAATGG
CTGCAAGAAAGTTTACGTCGAGAAAATGTATCATTGAATGCAAAAATCCGTCCTGGTTAT
GCTTCAAAATCAGATCTGCAGACTATGATTAAGGCATTAGCTAAAAGCCAGTCACTGCTG
GCGAAAAACAAAGGAATTATCCAGCTAGCTGCAGCAGCACTATCTGCACTAGATGAGTCA
CATAGTGCTAAATGGGATGCATTTAGCAGTGCTGAGAAGATACTGAATGTAAATGCTGGG
GACACGAGCCAAAGTCTTGCTGCTCAAATTAGTGATCTCATAAATAAAAGTGCGTTAGTT
AGTTCACAGGGTAATAACAAAATGGATGCTCAACGGGGGCTTCTTACTCTACAAGATGCT
CTGCTACTCACAGTTGTTGGATATATATTGGCAGGTGAGAATTTCCCATCTTCTGGGACT
GTTGGTCCTTTCTCTTGGCAAGAGGAACATTTTATGAAAGAAGCAATTGTTGATGCGATT
ATTGAGAACCCAACAGTTGCGAAATTAAAGTTTCTGAAAGGTTTAACTCAGGATCTAGAA
GCCAACTTTAACAGAAAATCAGAAGAGAAGAAGGAAGATCTTTCTAATACTGAAAGCATT
GATTTTGATGATGACGATTGGGGTAGTTGGGGTGATGAAGATTCTGGAAAAGATAAAAGA
AAAGAGCAAGTGTATGATGACATGCAATTGAAGTTAGAACTACGTGATAGGGTGGATAAT
CTATTCAAATTTTTTCACAAATTGTCCAGCTTTAAAAAGAATGTTTCATTCAGAGAGTGG
TCACAGGCTCTTAGTAAGTTCAATGATGATCCTTACTCAAACAAAGGACTGCTTTATAAA
GTGCTATCAAGGGTGTTAGATAAGCATGAAGTACCTGGCTTAGAGTATCATTCATCTACT
GTTGGCCGCCTATTCAAAAGCGGGTTTGGGAGATTTGGTCTTGGGCAGGCAAAACCAAGT
CTGGCAGATCACGATGTTATTCTCGTGTTTGTTGTGGGAGGCATAAATGGTGTAGAGGTT
CGAGAAGCTCAGGAGGCATTATCTGAGAGCAGCAGGCCTGAAGTCGAATTAATTTTAGGT
GGAACAACTTTTCTTACACCTAAAGATATGTTTGAACTACTGCTGGGCGATTATTGTTGT
GTGTAA

Peptide Sequence

PEP ID

Solyc12g013950.2.1
PEP Infomation

Sec1 family domain-containing protein 2 (AHRD V3.3 *** W9RNR0_9ROSA)
Sequence

MATVDVIKCCMDSIRQISDEIREAIVYLDAGCTESFEYVGAFSLFLELGAHAICSLEKMS
PLDKVVDWNSTSGPAKKIVVITSRLLSDAHRYILRCLSAFQTLRSCAIFTCISETGHSAY
PESPLGPDAYHEYESLLVQDYEELARKFLMNSSHTGESIVKESMSAEDEGWSQLTTSEEG
PFNFSSVASAQNSYEDSVIDRTDVRKKLKVSVHHFPLVLCPFSPRFFVLPSEGSVAEAYL
SAEHDNSISFGLPSISTGTTADGEDVPPGATLTAQFLYHLAAKMDLKLEIFSLGDVSKTV
GKLLTDMSSLYDVGRRKRSAGLLLIDRTLDLLTPCCHGDSLVDQMFSSLPHRERMASLSQ
AKSSRSQVKLGPAYLQRSPLTVQIPLNNFLREDTSSSYNFQLVESVEAFLRGWNSRDSTS
QMDELVNFSTKPSGEMSTQDFQSDLLCGSFVSTENFHGTPYLEAILERRSKDGAVLIKKW
LQESLRRENVSLNAKIRPGYASKSDLQTMIKALAKSQSLLAKNKGIIQLAAAALSALDES
HSAKWDAFSSAEKILNVNAGDTSQSLAAQISDLINKSALVSSQGNNKMDAQRGLLTLQDA
LLLTVVGYILAGENFPSSGTVGPFSWQEEHFMKEAIVDAIIENPTVAKLKFLKGLTQDLE
ANFNRKSEEKKEDLSNTESIDFDDDDWGSWGDEDSGKDKRKEQVYDDMQLKLELRDRVDN
LFKFFHKLSSFKKNVSFREWSQALSKFNDDPYSNKGLLYKVLSRVLDKHEVPGLEYHSST
VGRLFKSGFGRFGLGQAKPSLADHDVILVFVVGGINGVEVREAQEALSESSRPEVELILG
GTTFLTPKDMFELLLGDYCCV*

Transcript Sequence

Transcript ID

Solyc12g013950.2.1
Transcript Infomation

Sec1 family domain-containing protein 2 (AHRD V3.3 *** W9RNR0_9ROSA)
Sequence

TCGAACTTTCGTCTAATTTTCCGTTACTATATCCAACTTCGAGCTTGTATATTCAAAGTT
TAAAACTTTAGACCAATTAAATTTTTGATGTGACTAAACTTTAAAACTTTATTAAATTTG
GCTATTTATTAAATAGAGCATTTTTTTCCACATCACAAGAGAGAGCCCACTAGAAGCCCA
GCGGGTCCGTGATTATGCTGCCTTCACAATCCAGTTGACCCGGGTCATCGCAGTGTGATT
GAAGTGAAATTCGCCGGGATTCCGTCGCCGGAAATATATCTTGCTCCGGCACTGGCCACG
GCCACATCGCGTGAGAGGAATTATGGCTACGGTTGATGTGATCAAGTGCTGTATGGATTC
CATTAGACAAATATCAGATGAAATTAGAGAAGCCATAGTTTATCTGGATGCAGGGTGTAC
CGAAAGCTTTGAATATGTTGGCGCATTCTCTCTGTTTTTGGAGCTTGGTGCACATGCCAT
TTGCAGCTTGGAGAAAATGTCTCCTCTTGATAAGGTGGTTGATTGGAATTCGACTTCTGG
GCCTGCAAAGAAAATTGTTGTTATCACGTCACGTCTTCTAAGTGATGCACATAGATACAT
TTTACGTTGTCTGAGTGCATTTCAGACTCTGCGCAGCTGTGCTATATTTACATGCATTTC
AGAGACAGGTCACTCAGCATATCCTGAATCACCTTTAGGACCGGATGCATATCATGAATA
TGAATCTTTGCTTGTCCAAGATTATGAGGAGCTTGCCAGAAAGTTTCTGATGAACTCTAG
CCATACCGGAGAAAGCATAGTAAAGGAAAGTATGTCCGCTGAAGATGAAGGATGGTCACA
ATTAACCACCAGCGAAGAGGGGCCTTTTAATTTCAGTTCTGTTGCAAGTGCACAAAATTC
ATATGAAGACAGTGTAATTGACCGGACAGATGTACGGAAAAAGTTGAAAGTTTCTGTGCA
TCATTTCCCTCTGGTCTTGTGTCCTTTTTCACCTAGATTCTTTGTCTTGCCTTCAGAAGG
ATCAGTTGCCGAAGCGTACCTATCCGCTGAACATGATAACTCTATAAGCTTTGGGTTACC
TTCAATAAGTACTGGGACAACTGCTGATGGTGAGGATGTCCCTCCTGGGGCAACTCTTAC
CGCTCAATTTCTTTATCATCTGGCGGCAAAGATGGACCTGAAACTTGAGATATTTTCCCT
GGGTGATGTTTCAAAAACTGTTGGAAAGCTTCTAACAGACATGTCAAGTCTTTATGATGT
TGGTCGACGTAAGAGATCTGCAGGGCTATTACTCATTGACCGCACTCTTGACCTTCTTAC
TCCATGCTGTCATGGGGATTCACTTGTGGATCAAATGTTTTCATCATTGCCTCACAGAGA
ACGGATGGCATCCTTAAGTCAAGCTAAAAGCTCCCGAAGCCAGGTTAAACTAGGCCCTGC
TTACTTACAGCGTTCACCCCTCACCGTACAGATACCACTCAATAATTTCCTAAGAGAGGA
TACTTCAAGTTCTTACAACTTTCAGCTGGTGGAAAGCGTTGAAGCATTTCTCCGTGGTTG
GAATTCAAGAGACTCAACTTCTCAGATGGACGAGTTGGTGAATTTTAGCACTAAACCTAG
TGGTGAAATGTCCACACAAGATTTTCAGAGTGACCTTCTTTGTGGTTCTTTCGTCTCTAC
GGAAAATTTTCATGGAACACCGTACCTAGAAGCCATACTAGAGCGAAGATCAAAAGATGG
GGCCGTGCTGATCAAGAAATGGCTGCAAGAAAGTTTACGTCGAGAAAATGTATCATTGAA
TGCAAAAATCCGTCCTGGTTATGCTTCAAAATCAGATCTGCAGACTATGATTAAGGCATT
AGCTAAAAGCCAGTCACTGCTGGCGAAAAACAAAGGAATTATCCAGCTAGCTGCAGCAGC
ACTATCTGCACTAGATGAGTCACATAGTGCTAAATGGGATGCATTTAGCAGTGCTGAGAA
GATACTGAATGTAAATGCTGGGGACACGAGCCAAAGTCTTGCTGCTCAAATTAGTGATCT
CATAAATAAAAGTGCGTTAGTTAGTTCACAGGGTAATAACAAAATGGATGCTCAACGGGG
GCTTCTTACTCTACAAGATGCTCTGCTACTCACAGTTGTTGGATATATATTGGCAGGTGA
GAATTTCCCATCTTCTGGGACTGTTGGTCCTTTCTCTTGGCAAGAGGAACATTTTATGAA
AGAAGCAATTGTTGATGCGATTATTGAGAACCCAACAGTTGCGAAATTAAAGTTTCTGAA
AGGTTTAACTCAGGATCTAGAAGCCAACTTTAACAGAAAATCAGAAGAGAAGAAGGAAGA
TCTTTCTAATACTGAAAGCATTGATTTTGATGATGACGATTGGGGTAGTTGGGGTGATGA
AGATTCTGGAAAAGATAAAAGAAAAGAGCAAGTGTATGATGACATGCAATTGAAGTTAGA
ACTACGTGATAGGGTGGATAATCTATTCAAATTTTTTCACAAATTGTCCAGCTTTAAAAA
GAATGTTTCATTCAGAGAGTGGTCACAGGCTCTTAGTAAGTTCAATGATGATCCTTACTC
AAACAAAGGACTGCTTTATAAAGTGCTATCAAGGGTGTTAGATAAGCATGAAGTACCTGG
CTTAGAGTATCATTCATCTACTGTTGGCCGCCTATTCAAAAGCGGGTTTGGGAGATTTGG
TCTTGGGCAGGCAAAACCAAGTCTGGCAGATCACGATGTTATTCTCGTGTTTGTTGTGGG
AGGCATAAATGGTGTAGAGGTTCGAGAAGCTCAGGAGGCATTATCTGAGAGCAGCAGGCC
TGAAGTCGAATTAATTTTAGGTGGAACAACTTTTCTTACACCTAAAGATATGTTTGAACT
ACTGCTGGGCGATTATTGTTGTGTGTAAGGCTGTGTAGCTTTCTAGTTTTGTTATGTAAA
GTTTAAGATGACAAGTTCTGTCTAATGTCTGATATTTAGAGAATACAAAACTTTTCCTTA
ATGTAAACAGCATTGGAACTTATATGATTTTCAATATATTTTTCGTATACTTCCTAATAA
AAAAGAAATACAATGGTTGTCAACAAA