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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g013910.2.1
CDS Infomation

PRA1 family protein (AHRD V3.3 *** K4DCS6_SOLLC)
Sequence

ATGGCGTTCTCAGCTAACCCGTTATCTCTGAGTGTACCCGAACCCGTATTCGAATCCTGG
CTCCGAGATACTGGCTACCTCGAAATTCTCGATCAACGGACCACCGATCTCCACCGCCAC
TCCTCCACCACCACCGTGGCGGCGACGACTGCTTCCTCCGACGCTGCTGTTACTAATTCT
GCTGCAGCCGCGGTGTCAATTTCAAATGGAGTCTTCGTTCTAATATTTTCACGTATTGGA
ACCTTATTATCGCTTTTAACGCTTAATCCGTTTGCAAAACTCACATCTGATGACTTTTCC
GGTGATACCCCGTCGTGGACCCTCCAATTCGTCGGGTCATTCGATTCCTACTCATTTCCT
TCGTCGCCGTCTCAGGCTCGGCTTAGAGTACACGAGAATGTGAAACGCTATGCTCGGAAT
TATGCCTCCCTCTTTGTCCTCTTCTTTGCTTGCTCTCTGTACCAAAAGCTGTTTGCCCTT
GTTGGGTTGATATCATGTTTGGCACTTTGGGATGTATTAAAGTTATGTGGAGATCGCTGG
GGATTAGAGCACCGCCCAGTTATCAAACAAAGCTTGATTCGCATTGCTCAGTGTGCTACT
GCAGTTATTCTATTCTGTACCAACGTTCAAATGGCTCTCTTCTCAGCTCTTGCGGTCAGT
TATGTAGTGATGATTCTGCATGCCTCATTTAGGAAGCTGACCCCCTCAAAACAATCAACT
TCAAAAGAAGTGAACAGGAGGGTCCTTAGAAGTTGA

Peptide Sequence

PEP ID

Solyc12g013910.2.1
PEP Infomation

PRA1 family protein (AHRD V3.3 *** K4DCS6_SOLLC)
Sequence

MAFSANPLSLSVPEPVFESWLRDTGYLEILDQRTTDLHRHSSTTTVAATTASSDAAVTNS
AAAAVSISNGVFVLIFSRIGTLLSLLTLNPFAKLTSDDFSGDTPSWTLQFVGSFDSYSFP
SSPSQARLRVHENVKRYARNYASLFVLFFACSLYQKLFALVGLISCLALWDVLKLCGDRW
GLEHRPVIKQSLIRIAQCATAVILFCTNVQMALFSALAVSYVVMILHASFRKLTPSKQST
SKEVNRRVLRS*

Transcript Sequence

Transcript ID

Solyc12g013910.2.1
Transcript Infomation

PRA1 family protein (AHRD V3.3 *** K4DCS6_SOLLC)
Sequence

ATGGCGTTCTCAGCTAACCCGTTATCTCTGAGTGTACCCGAACCCGTATTCGAATCCTGG
CTCCGAGATACTGGCTACCTCGAAATTCTCGATCAACGGACCACCGATCTCCACCGCCAC
TCCTCCACCACCACCGTGGCGGCGACGACTGCTTCCTCCGACGCTGCTGTTACTAATTCT
GCTGCAGCCGCGGTGTCAATTTCAAATGGAGTCTTCGTTCTAATATTTTCACGTATTGGA
ACCTTATTATCGCTTTTAACGCTTAATCCGTTTGCAAAACTCACATCTGATGACTTTTCC
GGTGATACCCCGTCGTGGACCCTCCAATTCGTCGGGTCATTCGATTCCTACTCATTTCCT
TCGTCGCCGTCTCAGGCTCGGCTTAGAGTACACGAGAATGTGAAACGCTATGCTCGGAAT
TATGCCTCCCTCTTTGTCCTCTTCTTTGCTTGCTCTCTGTACCAAAAGCTGTTTGCCCTT
GTTGGGTTGATATCATGTTTGGCACTTTGGGATGTATTAAAGTTATGTGGAGATCGCTGG
GGATTAGAGCACCGCCCAGTTATCAAACAAAGCTTGATTCGCATTGCTCAGTGTGCTACT
GCAGTTATTCTATTCTGTACCAACGTTCAAATGGCTCTCTTCTCAGCTCTTGCGGTCAGT
TATGTAGTGATGATTCTGCATGCCTCATTTAGGAAGCTGACCCCCTCAAAACAATCAACT
TCAAAAGAAGTGAACAGGAGGGTCCTTAGAAGTTGATGAGTGGTTATTATTGTCAAGTCA
TACAATCACATAGTCGTTGCCTGGAGAGAGGGTTAACCGTGTTTACAAACTATAGCATTC
GAGTCTGGCTCATGAGTGCATCTCTCCATATGAAACGGAGAATTCTTCGAGTCACAATGT
AAGAAAAGTTTCTTCTTTAATTTGATTTTTTTTTAGGATGTGTGTATGTGTCTGTACAAT
GGGAAAAAAAAAGACTAGATAAGATTTCAGATGGGTGTAGAACCCTAAAGAGAATTGGCA
CTGCTAAGGCTTTGTTCTTTTACTATATGAATTAGTATTAGTAACACATTTATTAATCTT
TGACTGAATAATTTGCTTTCCTTGACATGCTATAGTTAATACTTAAATAGTATAAACTTT
GTCTTTGCACATGAACAAAATGGGCTAATGTTGCTTTAATATATCATAGATC