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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g013620.2.1
CDS Infomation

jasmonic acid 2
Sequence

ATGGGTGTTCAAGAAAAAGATCCACTTTTGCAATTAAGTTTACCACCAGGATTTAGATTT
TATCCAACTGATGAAGAGCTTTTAGTTCAATATTTATGTAAGAAAGTTGCTGGACATGAT
TTTCCTCTACAAATTATTGGTGAAATTGATTTATACAAATTTGATCCTTGGGTTTTACCT
AGTAAGGCGACATTTGGTGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTAT
CCGAATGGATCTAGACCGAATCGAGTAGCAGGTTCGGGTTATTGGAAAGCAACGGGGACG
GATAAGGTGATAACTTCGCAAGGAAGAAAAGTTGGAATTAAGAAAGCTCTTGTGTTTTAT
GTGGGTAAAGCTCCAAAAGGATCCAAGACGAATTGGATTATGCATGAATATAGACTTTTT
GAATCTTCAAGGAAAAATAATGGAAGTTCAAAGCTAGATGAATGGGTGCTTTGTCGAATT
TATAAGAAGAATTCAAGTGGACCAAAACCTCTGATGTCTGGTTTACACAGCAGTAATGAA
TACAGCCATGGTTCGTCGACTTCGTCATCATCCCAATTCGATGATATGCTCGAATCATTA
CCAGAAATGGACGATCGATTCTCCAATTTACCGAGGTTGAACTCTCTCAAGGCCGAGAAA
TTCAACCTCGATCGTCTGGATTCAGCCAATTTCGATTGGGCAATTCTCGCTGGGCTCAAA
CCAATGCCGGAATTGGGCCCAGCAAATCAAGCTCCAGGCGTTCAGGGTCAGGCTCAGGGG
CATGTCAATAACCACATTCACAGCGACAACAACAATATGAATTTTCTCAACGATGTTTAC
GCCCATCCTCCAAATTTCCGAGGCAACACAAAGGTTGAAAGTATTAATCTAGACGAAGAA
GTTGAAAGCGGGAAAAGAAATCAACGGATTGACCAATCGAGTTACTTCCAACAGAGTCTC
AATGGATTTTCCCAAGCGTATACAAACAATGTGGATCAATTCGGGATCCAATGTCCGAAT
CAGACGTTAAATCTCGGGTTCAAGCAGTAG

Peptide Sequence

PEP ID

Solyc12g013620.2.1
PEP Infomation

jasmonic acid 2
Sequence

MGVQEKDPLLQLSLPPGFRFYPTDEELLVQYLCKKVAGHDFPLQIIGEIDLYKFDPWVLP
SKATFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVITSQGRKVGIKKALVFY
VGKAPKGSKTNWIMHEYRLFESSRKNNGSSKLDEWVLCRIYKKNSSGPKPLMSGLHSSNE
YSHGSSTSSSSQFDDMLESLPEMDDRFSNLPRLNSLKAEKFNLDRLDSANFDWAILAGLK
PMPELGPANQAPGVQGQAQGHVNNHIHSDNNNMNFLNDVYAHPPNFRGNTKVESINLDEE
VESGKRNQRIDQSSYFQQSLNGFSQAYTNNVDQFGIQCPNQTLNLGFKQ*

Transcript Sequence

Transcript ID

Solyc12g013620.2.1
Transcript Infomation

jasmonic acid 2
Sequence

CTATCCCAATTTTCAAAAAAAAAAAAAAAACTTTAGAAATTTTGAAAAAAAATAATATTT
TTTTTATGAAAAAAAAAGAAGTTTTTTATTAATTAAAAAAAAAATTATGGGTGTTCAAGA
AAAAGATCCACTTTTGCAATTAAGTTTACCACCAGGATTTAGATTTTATCCAACTGATGA
AGAGCTTTTAGTTCAATATTTATGTAAGAAAGTTGCTGGACATGATTTTCCTCTACAAAT
TATTGGTGAAATTGATTTATACAAATTTGATCCTTGGGTTTTACCTAGTAAGGCGACATT
TGGTGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTATCCGAATGGATCTAG
ACCGAATCGAGTAGCAGGTTCGGGTTATTGGAAAGCAACGGGGACGGATAAGGTGATAAC
TTCGCAAGGAAGAAAAGTTGGAATTAAGAAAGCTCTTGTGTTTTATGTGGGTAAAGCTCC
AAAAGGATCCAAGACGAATTGGATTATGCATGAATATAGACTTTTTGAATCTTCAAGGAA
AAATAATGGAAGTTCAAAGCTAGATGAATGGGTGCTTTGTCGAATTTATAAGAAGAATTC
AAGTGGACCAAAACCTCTGATGTCTGGTTTACACAGCAGTAATGAATACAGCCATGGTTC
GTCGACTTCGTCATCATCCCAATTCGATGATATGCTCGAATCATTACCAGAAATGGACGA
TCGATTCTCCAATTTACCGAGGTTGAACTCTCTCAAGGCCGAGAAATTCAACCTCGATCG
TCTGGATTCAGCCAATTTCGATTGGGCAATTCTCGCTGGGCTCAAACCAATGCCGGAATT
GGGCCCAGCAAATCAAGCTCCAGGCGTTCAGGGTCAGGCTCAGGGGCATGTCAATAACCA
CATTCACAGCGACAACAACAATATGAATTTTCTCAACGATGTTTACGCCCATCCTCCAAA
TTTCCGAGGCAACACAAAGGTTGAAAGTATTAATCTAGACGAAGAAGTTGAAAGCGGGAA
AAGAAATCAACGGATTGACCAATCGAGTTACTTCCAACAGAGTCTCAATGGATTTTCCCA
AGCGTATACAAACAATGTGGATCAATTCGGGATCCAATGTCCGAATCAGACGTTAAATCT
CGGGTTCAAGCAGTAGAGGATACTGGAAAGTAAGAAAAGTTGTAGCTCGAAATCTGAATG
CCAGTATACTGTGTATATATACAGAAGGCCTGGATTTAGATTTCCTTGGCCCAACGGATT
CGAAGAAAGAGCAAGTACAGTATCATGCCAAGGAAATTAAGTCCTTCGAGGGCACGTCTG
GGCAGACGTCGTGGACGTTATTTGCAAGTTCTTGCAATTGTGTCTGAAGTCATTAGGCTG
AGTGGCACTTCTTATTTGCAAGTTGTGTTTGAAGTCATTAGGCCGAAGGCACGTCTGCGT
GGACGATAAAATAATGTACACAAACAGGAGATATATGCAGGGGCGTGTATATTCTTTTAG
GAAACTGGGCTTTTAGTTTGTTTTATTTTATGATACATTTCCAGATTTGGATGTATT