Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g011190.2.1
CDS Infomation

Plant regulator RWP-RK family protein (AHRD V3.3 *-* AT2G43500.9)
Sequence

ATGAGTAATCTACAAGGTTCAGCTCCAAGCTCCAACCCAAACCCGATTCAGAATCCGAAT
CCGAATCCGTATCCGAAACCAATTATGGACCCAAAATCTGTATCCTTTGATGACGTTTCC
AAGTTGTTCAGTTTGCCTCTCTCTGATGCTGCTGAATCCCTAGGTGTTTGTGCAAGTGTT
CTCAAGAAAATATGCTATGAGAATGGTCTGGTGCGGTGGCCATATCGAAAGGTCAGCTCT
GGAAAGAGTATTGAAGATATAAAGAAGGAGGCATTAAGGGAAAAACAAGAGCGATCCCTG
GAATTTCCTAAAGCTCCTGGAGAAAAGAATGGTTCTTTAGCCAGTTCTGCAATCTCATCA
TTTTCGGGCTCCCCCTTGCCAAACAAGAGTATAAGTTCCACAATGGAAATGCCAAGAGCA
GGGGTCTTCTCACAGCAGCAAGGAACCAGGAATTTTCAATCTGGAAGTTCACCGCATTTC
CGTATCTCTAACTTGACAAAAGGAACTTCAGTTTATGATGAATTCAAATATGGTTTTCCA
TCCGATGGCTTGTCTACTGCAACGTATAGGTGGTGGGGAAACAAGAGTCCTGATGGTAAC
CAGGATAGCAAATTGAATGATGACAATGCCAAAAACAGCACGGAGCAAGCAGAAAATGTA
GCAGAGAAAACTGAATGCCAGACAAGTGTGGATTCCACAGGAACGACTTTACTGACTGAT
GTGAGGAAACGAGCTGCCAAAGAGGGGAAAGAAACACTGAGGCTTGGAGTTCATAGACGA
CGAAGTGCAAAGATGCTTGATTCAACAAAAAGGAAGATTCTTCATCAGGTATTCAAATCG
TATTTTCATGTCCATGGAGATATGAGTAGCATGGAATCATGA

Peptide Sequence

PEP ID

Solyc12g011190.2.1
PEP Infomation

Plant regulator RWP-RK family protein (AHRD V3.3 *-* AT2G43500.9)
Sequence

MSNLQGSAPSSNPNPIQNPNPNPYPKPIMDPKSVSFDDVSKLFSLPLSDAAESLGVCASV
LKKICYENGLVRWPYRKVSSGKSIEDIKKEALREKQERSLEFPKAPGEKNGSLASSAISS
FSGSPLPNKSISSTMEMPRAGVFSQQQGTRNFQSGSSPHFRISNLTKGTSVYDEFKYGFP
SDGLSTATYRWWGNKSPDGNQDSKLNDDNAKNSTEQAENVAEKTECQTSVDSTGTTLLTD
VRKRAAKEGKETLRLGVHRRRSAKMLDSTKRKILHQVFKSYFHVHGDMSSMES*

Transcript Sequence

Transcript ID

Solyc12g011190.2.1
Transcript Infomation

Plant regulator RWP-RK family protein (AHRD V3.3 *-* AT2G43500.9)
Sequence

CCCATTTTTTATGTATCTAATAAATCAATTTCAAAAATTAATCAAATTTTTATATATATT
TTAAAAATATTATACTTTTACTCACAATATTTTTCAAAATATTAACTTAATCATAATAAA
TTGAGGGTATACTATTTTGAATAAACTAGTTGTCGTCTTTGACTGAACCAGGGGTCCAAT
TGAGCATGAGTAATCTACAAGGTTCAGCTCCAAGCTCCAACCCAAACCCGATTCAGAATC
CGAATCCGAATCCGTATCCGAAACCAATTATGGACCCAAAATCTGTATCCTTTGATGACG
TTTCCAAGTTGTTCAGTTTGCCTCTCTCTGATGCTGCTGAATCCCTAGGTGTTTGTGCAA
GTGTTCTCAAGAAAATATGCTATGAGAATGGTCTGGTGCGGTGGCCATATCGAAAGGTCA
GCTCTGGAAAGAGTATTGAAGATATAAAGAAGGAGGCATTAAGGGAAAAACAAGAGCGAT
CCCTGGAATTTCCTAAAGCTCCTGGAGAAAAGAATGGTTCTTTAGCCAGTTCTGCAATCT
CATCATTTTCGGGCTCCCCCTTGCCAAACAAGAGTATAAGTTCCACAATGGAAATGCCAA
GAGCAGGGGTCTTCTCACAGCAGCAAGGAACCAGGAATTTTCAATCTGGAAGTTCACCGC
ATTTCCGTATCTCTAACTTGACAAAAGGAACTTCAGTTTATGATGAATTCAAATATGGTT
TTCCATCCGATGGCTTGTCTACTGCAACGTATAGGTGGTGGGGAAACAAGAGTCCTGATG
GTAACCAGGATAGCAAATTGAATGATGACAATGCCAAAAACAGCACGGAGCAAGCAGAAA
ATGTAGCAGAGAAAACTGAATGCCAGACAAGTGTGGATTCCACAGGAACGACTTTACTGA
CTGATGTGAGGAAACGAGCTGCCAAAGAGGGGAAAGAAACACTGAGGCTTGGAGTTCATA
GACGACGAAGTGCAAAGATGCTTGATTCAACAAAAAGGAAGATTCTTCATCAGGTATTCA
AATCGTATTTTCATGTCCATGGAGATATGAGTAGCATGGAATCATGACAGAGGACCAATA
TTCGTCTTCTCTCGATATGATGGAATGAACAATGATCATTGCAAGACTCACACGAAGAGG
ACATGTTACATCTAGGTTCCAGTGCTGTGTGTGAAATTTACCAAGCAATTATATAAGTTA
TGTTTTCTACGGCTATGACTGAGATTAGATTCTTGAACTTCCATAGGCAAAATTAGTCAC
CAATATATGGAGTTTTAGCTTGATCTTGATTATTTCTAGCTTAGAAGACAAAATTAGTCA
CACTCTATTGTAATTTATTGTTATTTTCTTGCAATAGTGATTCGTCTAACTTGGGTCGTG
AATTTAGGTTTAAGTGATCACGATTGTTAGAGAGAGAT