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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g011010.2.1
CDS Infomation

protodermal factor 1 (AHRD V3.3 *-* AT2G42840.1)
Sequence

ATGGGGAATTACAAGCAAATATCTCTAATTTTGTGGGCTGCATTGCTCATACATAATTTG
GTCACTCCTGTTATGGCTAGAGCTTCTTTTGAAGAACAAAAGACATATTACTCTCCTGAT
CCGAGTACCGGAAATCCTCCTAGTTCAGGTTCAGGTTCACATACACCTCCGTCTCATGAT
TCAGGAGAAGGTGGTCATGGAGGAAAATCACCTGGTGGGAATTGTGGTACCCCGGCCCCT
AGTGGAGGGCATAAACATCACCATCATCATAACCCTACCCCATCCCCTCCATCAGGAGGG
CATGGAGGAGGTAGTTATTCTTCGCCTCCACCAACTCATCATGGTGGAGGTGGAACCCCT
CCTAGTACACCAACTCCTGACCCCGGTACTCCAAGCACTCCGGGGGGTGGTGGATACTAT
CCTTCCCCTACTCCTACACCTAGTACACCATCTACCCCCTCTACGCCTACAATTGAAACA
CCACCAACTCCTACCGTTGACCCTGGAACTCCAAGCACTCCAGGGGGTGGTGGTTACTAT
CCTTCCCCTACTCCTACACCTAGTACACCATCTACCCCCTCTACGCCTACTATTGAAACA
CCACCAACTCCAACCGTTGATCCTGGAACTCCAAGCACTCCGGGTGGTGGTGGTTACTAT
CCTTCGCCTACACCTACACCTAGTACCCCGTCTACACCTACTATTGAAACACCACCAACT
CCTACCGTTGATCCTGGAACTCCAAGCACTCCAGGTGGCGGTGGTGGTTACTATCCTTCC
CCTACACCTACTACCCCGTCTACACCTACCATTGAAACACCACCTACCCCTATCATTGAC
CCTGGAACTCCAAGTGCTCCAGGTGTCTTCCCAATTGACCCCAACTCACCACCTTTTACA
TGCAATTACTGGAGGACTCACCCGACGCTTATATGGGGTTTATTTGGCTGGTTGGGAACG
GTAGGAAATTCATTTGGTGTGGCTAGTGTTCCAGGATTTGGTTCAAACATGAACTTGCTT
CAAGCACTTTCAAACTCTCGTACCGATGCCTACGGGGATCTCTATCGAGAAGGAACAGCT
TCATTATTGAACTCCATGGTTAGCAAAAGCTTCACCTACACTACCAACCAAGTGAGGGAT
AGTTTTGTTTCAGCACTAAGTTCAGACAAGTCAGCAGCAGCTCAGGCACAACTATTCAAG
TTAGCTAACGAGGGTAGAGCTTGA

Peptide Sequence

PEP ID

Solyc12g011010.2.1
PEP Infomation

protodermal factor 1 (AHRD V3.3 *-* AT2G42840.1)
Sequence

MGNYKQISLILWAALLIHNLVTPVMARASFEEQKTYYSPDPSTGNPPSSGSGSHTPPSHD
SGEGGHGGKSPGGNCGTPAPSGGHKHHHHHNPTPSPPSGGHGGGSYSSPPPTHHGGGGTP
PSTPTPDPGTPSTPGGGGYYPSPTPTPSTPSTPSTPTIETPPTPTVDPGTPSTPGGGGYY
PSPTPTPSTPSTPSTPTIETPPTPTVDPGTPSTPGGGGYYPSPTPTPSTPSTPTIETPPT
PTVDPGTPSTPGGGGGYYPSPTPTTPSTPTIETPPTPIIDPGTPSAPGVFPIDPNSPPFT
CNYWRTHPTLIWGLFGWLGTVGNSFGVASVPGFGSNMNLLQALSNSRTDAYGDLYREGTA
SLLNSMVSKSFTYTTNQVRDSFVSALSSDKSAAAQAQLFKLANEGRA*

Transcript Sequence

Transcript ID

Solyc12g011010.2.1
Transcript Infomation

protodermal factor 1 (AHRD V3.3 *-* AT2G42840.1)
Sequence

TTTATAACATGCATCTAACTCCTTTCTTTTGTCACTTCACTCTTAGTAGTTGTCTCTTTA
ATTTGGAAGCAAACAAAAATGGGGAATTACAAGCAAATATCTCTAATTTTGTGGGCTGCA
TTGCTCATACATAATTTGGTCACTCCTGTTATGGCTAGAGCTTCTTTTGAAGAACAAAAG
ACATATTACTCTCCTGATCCGAGTACCGGAAATCCTCCTAGTTCAGGTTCAGGTTCACAT
ACACCTCCGTCTCATGATTCAGGAGAAGGTGGTCATGGAGGAAAATCACCTGGTGGGAAT
TGTGGTACCCCGGCCCCTAGTGGAGGGCATAAACATCACCATCATCATAACCCTACCCCA
TCCCCTCCATCAGGAGGGCATGGAGGAGGTAGTTATTCTTCGCCTCCACCAACTCATCAT
GGTGGAGGTGGAACCCCTCCTAGTACACCAACTCCTGACCCCGGTACTCCAAGCACTCCG
GGGGGTGGTGGATACTATCCTTCCCCTACTCCTACACCTAGTACACCATCTACCCCCTCT
ACGCCTACAATTGAAACACCACCAACTCCTACCGTTGACCCTGGAACTCCAAGCACTCCA
GGGGGTGGTGGTTACTATCCTTCCCCTACTCCTACACCTAGTACACCATCTACCCCCTCT
ACGCCTACTATTGAAACACCACCAACTCCAACCGTTGATCCTGGAACTCCAAGCACTCCG
GGTGGTGGTGGTTACTATCCTTCGCCTACACCTACACCTAGTACCCCGTCTACACCTACT
ATTGAAACACCACCAACTCCTACCGTTGATCCTGGAACTCCAAGCACTCCAGGTGGCGGT
GGTGGTTACTATCCTTCCCCTACACCTACTACCCCGTCTACACCTACCATTGAAACACCA
CCTACCCCTATCATTGACCCTGGAACTCCAAGTGCTCCAGGTGTCTTCCCAATTGACCCC
AACTCACCACCTTTTACATGCAATTACTGGAGGACTCACCCGACGCTTATATGGGGTTTA
TTTGGCTGGTTGGGAACGGTAGGAAATTCATTTGGTGTGGCTAGTGTTCCAGGATTTGGT
TCAAACATGAACTTGCTTCAAGCACTTTCAAACTCTCGTACCGATGCCTACGGGGATCTC
TATCGAGAAGGAACAGCTTCATTATTGAACTCCATGGTTAGCAAAAGCTTCACCTACACT
ACCAACCAAGTGAGGGATAGTTTTGTTTCAGCACTAAGTTCAGACAAGTCAGCAGCAGCT
CAGGCACAACTATTCAAGTTAGCTAACGAGGGTAGAGCTTGAGCACACAAGTCGTTAATC
CCTTTTCAAAATCGTCACTTTTCATCAGTTTATCGCGCTATGCATGATTTCATATATATA
GTATATGTTTATCTTGTGTGGATTGAATATTAGTAATGCTTATTTTTCCTCTCTATGCTT
TTCTATGTTACAATAGTAAGAGGTTTATGTAGGTTATTATGTGTGAATGCCACCTTCTAT
GTTCCATGTTATAATATCAAATATAATATGAAAGGAGAACACTATTAATGTCCCCAACAG
GCAATAACAGATTAAAATTTTTTAAAAATTGCTATGTTATGTAAATGATTTGGATAATAA
CAAACAACATAGAGTCGCAATTAAAACGACTTTCACATTTTTGTGTACTGGAT