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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g010700.2.1
CDS Infomation

Regulator of Vps4 activity in the MVB pathway protein, putative (AHRD V3.3 *** A0A061E4V2_THECC)
Sequence

ATGTTTGATGTAATTTTTGGATGGAGAAAAGCTACTAAATGTAAGAATTTGATTAAAAGA
GTTAAATGCCGGCTTAAACTGTTGAAGAACAAGAGAAGTTGCATTGTTAAGCAATTGAAA
GATGATTTAGGGCAACTACTTAGACATGGACATTACCAAATTGTCTTTGATAGGGTTGAT
CAACTATTTATGGATGACAATATGTTGGTAGTATATGATTTATTGGAGAATTTTTGTGAA
TTTATCCTCATTAATCTTCCATATATACGTAGACACAAAGATTGTCCAAATGACATCAAT
GAAGCAGTGTCAAGTCTCGTATTTGCATCTACGAGACTTGGCAATTTACCAGAGCTTCCT
ACGATAAGGAAGCTCTTCGTACAACGTTATGGGAAGAAATTCGAAACATCTGCACTTGAA
TTACTTCCTGGAAATCTTGTGAACCATCAGATAAAACAGAACTTGTGTATAAAGTCTGTT
TCAAATGAAGTGAAATATAAATTAGTGGATGAAATAGCAAGGATTTGCTTTCAAAAAGGA
CCTTTACTTCTTGAATACAGAAATGAATCACAACATCAACAACAGGTGATTGGTAACAAG
AGAAGAGAAATGAGATTGAAGAATTCCAACATCGCGACAGAAGCACATATTGTATCGATT
GATTGTTCATCTGCAACTGATGAAACTTCTACGGATTATTTATCAGCAATCGAGCAAACT
TCTATAGGTTCAGTTCATTGTTTGAGGAACAATGAGCAGGAAAGAATATCAAATCCTGTT
CGATGTAGTGATTATTCGTCTCAATGTACAATTTCTAGTCCTAAGCTTGTAATGAAAAGA
GAGTTTTGGAGAACCAATGGCTTTATATCTGGACAAACGACAGATCAATTAGCTTATAAG
GACGACGTTGAGGAGTTTGAGTCTATTCTAAGCAAAGACTTAAACTTTCAAGATCAGAGG
CTTTTCATGTTCAGAGGACCTCTCTTTCCCTTAATGTTAAAGATGGATACTGATCATATC
AATGTGAGTATTTCCCCTCTGAAAAAGACGAGACTTATCGCTATGAAGGATGCATCATTC
ATGACGGATGATTTGGAGGGTTGTTCGTTTACATTCTCATCATCAGCACCAGCAATAACT
CGCGGACAACTTTATACGAGGACAAGGACTATGCCAGTTGAAAGGCCTAATGATAACCTC
GCGGACAACTTTCTTCGATCAAATTCTTTTCCAGTAATTCACAAGCCTAGTGAAGAATCG
TCGTTGAAAAGCTATGTCCATCCTAAGCTCCCGGATTACGATGAAATTGCAGCTATGTTC
AAGGCTCTCAAGAAAGAAAAACTGCAAAAGAAAAAATGCTAG

Peptide Sequence

PEP ID

Solyc12g010700.2.1
PEP Infomation

Regulator of Vps4 activity in the MVB pathway protein, putative (AHRD V3.3 *** A0A061E4V2_THECC)
Sequence

MFDVIFGWRKATKCKNLIKRVKCRLKLLKNKRSCIVKQLKDDLGQLLRHGHYQIVFDRVD
QLFMDDNMLVVYDLLENFCEFILINLPYIRRHKDCPNDINEAVSSLVFASTRLGNLPELP
TIRKLFVQRYGKKFETSALELLPGNLVNHQIKQNLCIKSVSNEVKYKLVDEIARICFQKG
PLLLEYRNESQHQQQVIGNKRREMRLKNSNIATEAHIVSIDCSSATDETSTDYLSAIEQT
SIGSVHCLRNNEQERISNPVRCSDYSSQCTISSPKLVMKREFWRTNGFISGQTTDQLAYK
DDVEEFESILSKDLNFQDQRLFMFRGPLFPLMLKMDTDHINVSISPLKKTRLIAMKDASF
MTDDLEGCSFTFSSSAPAITRGQLYTRTRTMPVERPNDNLADNFLRSNSFPVIHKPSEES
SLKSYVHPKLPDYDEIAAMFKALKKEKLQKKKC*

Transcript Sequence

Transcript ID

Solyc12g010700.2.1
Transcript Infomation

Regulator of Vps4 activity in the MVB pathway protein, putative (AHRD V3.3 *** A0A061E4V2_THECC)
Sequence

TATTTTTTTCTAAACTTCGATTATCAAATTTTTTTGTTCTTTTGTCTTGGCTAAATGTCA
ATCACTCTTTGAAAAGATTATCAAATTATCATTCTTTTGATTGGTTCAAAATATTAGTCA
TTTTCTAAACTTGAGATTGTTTTAAAATAGTTCATTTTTTAGAAAAATATTTAAAGTTAT
TGTTGCCACTTTTTATCCAAATTGACTCTTATTTCTTTTTAATAAATTACTGAAAATATG
ACATTTTAAGCAAAATAGAGGATAATTTAGATGTACTTTTTTTCAAATCGTAATGTCAAT
AAGTATCAAATAATTCGATTCACCATAGTTTAGAGTTAAAGACTTACAATTTAAAAATTA
ACCTAATATTGTTATCTCCGTAATTTATGCTTAACAAACATACAATTTTTTTTATTATTA
TTATTATCATTATTATTATTATTTTGGATAAGTGAAATGAGTTGTGGGGATTAACGAACG
TGATAAAAAATTAATGGGATAATGGTTATGACTTATGAGTATAGTGGAGTAGTAGTTAAT
AAAGCTGCTTTTAATATTTTTCGTTAATTTCATCTTTTTACCTTTTTTTTCCCCTTAAAC
TAAACTTTATATAAAAATACAAACTTTATTACTAGTGGTTCAGTTCATATATTCTTCAAC
CAAAAATATTTACTTTCTCTTTTAGCTAAAAAAGTAAAAACACACATGCTCTTTCATCTT
TTCCATTTTCATCATTCACTTGACACAATAATTCTCTAACAATAAATAGTTCACTCGTGT
CGATCAATTTATCGCTACGTATTAAGGTTACCTGTTGTATCGTACATATTTTTGTTAACA
TGTTTGATGTAATTTTTGGATGGAGAAAAGCTACTAAATGTAAGAATTTGATTAAAAGAG
TTAAATGCCGGCTTAAACTGTTGAAGAACAAGAGAAGTTGCATTGTTAAGCAATTGAAAG
ATGATTTAGGGCAACTACTTAGACATGGACATTACCAAATTGTCTTTGATAGGGTTGATC
AACTATTTATGGATGACAATATGTTGGTAGTATATGATTTATTGGAGAATTTTTGTGAAT
TTATCCTCATTAATCTTCCATATATACGTAGACACAAAGATTGTCCAAATGACATCAATG
AAGCAGTGTCAAGTCTCGTATTTGCATCTACGAGACTTGGCAATTTACCAGAGCTTCCTA
CGATAAGGAAGCTCTTCGTACAACGTTATGGGAAGAAATTCGAAACATCTGCACTTGAAT
TACTTCCTGGAAATCTTGTGAACCATCAGATAAAACAGAACTTGTGTATAAAGTCTGTTT
CAAATGAAGTGAAATATAAATTAGTGGATGAAATAGCAAGGATTTGCTTTCAAAAAGGAC
CTTTACTTCTTGAATACAGAAATGAATCACAACATCAACAACAGGTGATTGGTAACAAGA
GAAGAGAAATGAGATTGAAGAATTCCAACATCGCGACAGAAGCACATATTGTATCGATTG
ATTGTTCATCTGCAACTGATGAAACTTCTACGGATTATTTATCAGCAATCGAGCAAACTT
CTATAGGTTCAGTTCATTGTTTGAGGAACAATGAGCAGGAAAGAATATCAAATCCTGTTC
GATGTAGTGATTATTCGTCTCAATGTACAATTTCTAGTCCTAAGCTTGTAATGAAAAGAG
AGTTTTGGAGAACCAATGGCTTTATATCTGGACAAACGACAGATCAATTAGCTTATAAGG
ACGACGTTGAGGAGTTTGAGTCTATTCTAAGCAAAGACTTAAACTTTCAAGATCAGAGGC
TTTTCATGTTCAGAGGACCTCTCTTTCCCTTAATGTTAAAGATGGATACTGATCATATCA
ATGTGAGTATTTCCCCTCTGAAAAAGACGAGACTTATCGCTATGAAGGATGCATCATTCA
TGACGGATGATTTGGAGGGTTGTTCGTTTACATTCTCATCATCAGCACCAGCAATAACTC
GCGGACAACTTTATACGAGGACAAGGACTATGCCAGTTGAAAGGCCTAATGATAACCTCG
CGGACAACTTTCTTCGATCAAATTCTTTTCCAGTAATTCACAAGCCTAGTGAAGAATCGT
CGTTGAAAAGCTATGTCCATCCTAAGCTCCCGGATTACGATGAAATTGCAGCTATGTTCA
AGGCTCTCAAGAAAGAAAAACTGCAAAAGAAAAAATGCTAGCAGAAAGGAATGTATGTGT
GTATTTGTTTGTTGAGTGTATCTTTCCTTTTACTTGTTATACAAAATTCGTTAGATTTAT
GCATGAAATTACATTTCCCAACTGTAAACATTCTCGAATTTTCTGAGTGAAAATAAGCTA
ACGTTTGACCATGAAATTTTT