Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g010500.2.1
CDS Infomation

RING/U-box superfamily protein (AHRD V3.3 *-* AT3G47180.1)
Sequence

ATGGCTGATGATGAACAGAGGAAGCCAACTACCAGAAGAACACCTCTTAGCCAAATAGAT
GAGGAAAGGGTATGTATTATGTTGTCTATGGATGAAACTGAAAGTGAAAGTGAAGATGAG
GAAATTACTGCCTCTGATGAAGAATTTTTAGACAGTGAAATTCAAGATTTCGAGTTAGAA
TTCTACGACGATGACTATGATGATGATAACATGGAGGAAGATGATGTTGATCCAGATGAA
TTATCTTATGAGGAATTAATTGCTTTAGGAGAATTTGTTGGAGTAGAGAACAGAGGATTA
ACTGAAGAAGAAATCAACAAATCCTTACATTCTTCAACATTTCAATCCAATAATTCCAAG
ACACTTGTCAACAAGTGTGTTGTGTGTCAATTGGAATATGAAGAAGGAGAGAAGTTAGTA
GCACTTCCATGTGATCATCCCTACCATTTAGATTGTATTAAAAAATGGCTTCAAATAAAG
AAGGTTTGCCCAATATGTAGTGATGAGGTCTCATCTACTAATGTTCCCAAGGAACTATAG

Peptide Sequence

PEP ID

Solyc12g010500.2.1
PEP Infomation

RING/U-box superfamily protein (AHRD V3.3 *-* AT3G47180.1)
Sequence

MADDEQRKPTTRRTPLSQIDEERVCIMLSMDETESESEDEEITASDEEFLDSEIQDFELE
FYDDDYDDDNMEEDDVDPDELSYEELIALGEFVGVENRGLTEEEINKSLHSSTFQSNNSK
TLVNKCVVCQLEYEEGEKLVALPCDHPYHLDCIKKWLQIKKVCPICSDEVSSTNVPKEL*

Transcript Sequence

Transcript ID

Solyc12g010500.2.1
Transcript Infomation

RING/U-box superfamily protein (AHRD V3.3 *-* AT3G47180.1)
Sequence

ATGGCTGATGATGAACAGAGGAAGCCAACTACCAGAAGAACACCTCTTAGCCAAATAGAT
GAGGAAAGGGTATGTATTATGTTGTCTATGGATGAAACTGAAAGTGAAAGTGAAGATGAG
GAAATTACTGCCTCTGATGAAGAATTTTTAGACAGTGAAATTCAAGATTTCGAGTTAGAA
TTCTACGACGATGACTATGATGATGATAACATGGAGGAAGATGATGTTGATCCAGATGAA
TTATCTTATGAGGAATTAATTGCTTTAGGAGAATTTGTTGGAGTAGAGAACAGAGGATTA
ACTGAAGAAGAAATCAACAAATCCTTACATTCTTCAACATTTCAATCCAATAATTCCAAG
ACACTTGTCAACAAGTGTGTTGTGTGTCAATTGGAATATGAAGAAGGAGAGAAGTTAGTA
GCACTTCCATGTGATCATCCCTACCATTTAGATTGTATTAAAAAATGGCTTCAAATAAAG
AAGGTTTGCCCAATATGTAGTGATGAGGTCTCATCTACTAATGTTCCCAAGGAACTATAG
CTCTATGTCACTTGTATTATAAACCAAATTATTGTATTGAAATTAATCAAAAGATTTATT
GAATGTGTCAAGGGAAATTTGGAACATGGATTAAATGCACAATTTTTTCAAAAAAAAATG
TTGTACTAACATAATTTCTATTTGAATTAAGGGGTATGACCTTCATATTCTCTGTTTATA
AATGTATGTTGTATATGGACTTCTAACAATTTAGAAAATAATTTACTTTCGCTTCTAAGC
TGATTAAAGACGGATTCAGAATTTGAAATTGATGTGTTTCTACAACGATTTGACATATAT
TGATAAATATTTAGTAAATTATTTGGTTTCACGTGAACCTGTAATCAACCTTTTCAGATC
CACCCCTAAAGCTGATTTGTGTAACTTGTCAAGTATCGCGCGGTAAAATTTGCAAATAAG
AAAATAATAGTTGTAAGTTCATACATCTTATGATCTCAACTAA