Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g010040.2.1
CDS Infomation

leucine aminopeptidase A
Sequence

ATGGCCGCATTGAGAGTTTCTTCAGCATTGGCTTGTTCATCTTCTTCATCTTTTCACTCA
TACCCTTCAATTTTTACTAAATTTCAATCTAGTCCCATCTGGTCTTTTTCAATTTCAGTT
ACACCCTTGTGTTCAAGAAGAGCTAAAAGAATGGCTCATTCTATTGCTCGTGATACTCTT
GGTCTTACTCATACTAATCAAAGTGATGCTCCTAAGATTTCATTTGCTGCTAAAGAGATT
GATCTGGTGGAATGGAAAGGAGACATACTTACAGTAGGTGCCACAGAGAAGGACTTGGCT
AGAGACGGGAATTCTAAGTTCCAGAATCCACTATTGCAAAAGCTAGATTCCAAATTGAGT
GGCTTATTGTCTGAAGCTTCATCTGAGGAGGATTTTAGTGGAAAGGCTGGACAATCCACA
ATTTTGAGGCTTCCTGGTCTTGGCTCAAAAAGGATTGCTCTAGTTGGGCTTGGCTCACCA
ACATCATCAACTGCTGCTTATCGCTGTTTAGGGGAGGCTGCTGCTGCAGCTGCCAAGTCT
GCTCAGGCTAGTAATATCGCCATTGCTCTTGCTTCTACGGATGGACTCTCTGCAGAGTTG
AAGCTTAGCTCTGCCTCTGCCATAACAACTGGAGCTGTGCTGGGGACATTTGAAGATAAT
AGGTTTAAGTCAGAGTCAAAGAAACCAACATTGAAATCTTTGGATATTCTTGGACTGGGT
ACTGGACCTGAGATAGAGAAGAAAATCAAGTATGCAGCAGATGTCTGTGCAGGTGTTATA
CTCGGAAGAGAGCTTGTCAATGCACCCGCCAATGTTCTTACGCCTGCGGTACTTGCTGAA
GAGGCCAAAAAGATTGCGTCCACTTATAGCGATGTCTTTTCTGCAAACATCTTGGATGTT
GAGCAGTGCAAAGAATTGAAAATGGGATCCTATTTAGCTGTCGCTGCAGCTTCTGCAAAT
CCTGCTCATTTCATCCATTTGTGTTATAAGCCTAGTAGTGGAGAAATAAAAAAGAAGATA
GCCTTGGTTGGAAAGGGATTAACTTTTGACAGTGGTGGCTACAACATCAAGACTGGACCT
GGTTGTTCTATTGAGCTAATGAAGTTTGACATGGGAGGGGCTGCAGCTGTTTTGGGTGCA
GCAAAAGCTCTTGGTCAGATAAAACCCGCTGGAGTAGAGGTGCATTTCATTGTTGCAGCT
TGTGAGAATATGATCAGTGGGACAGGCATGAGGCCTGGAGACATTATCACTGCTTCAAAT
GGGAAGACAATTGAGGTTAACAACACGGATGCTGAGGGTAGACTCACACTTGCTGATGCG
TTGGTATATGCCTGTAACCAAGGTGTAGAAAAGATAGTTGATTTGGCAACATTAACTGGT
GCTTGTGTGGTTGCTCTTGGGCCTTCAATTGCTGGTATTTTTACACCTAGCGATGACCTA
GCTAAGGAGGTGGTTGCAGCTTCTGAGGTAAGCGGTGAAAAACTATGGAGGTTGCCGATG
GAGGATAGCTACTGGGACTCTATGAAATCAGGAGTGGCTGATATGGTGAACACGGGAGGT
CGTCCAGGTGGTGCGATAACCGCTGCTCTCTTCCTGAAGCAGTTTGTTAACGAGAAGGTC
CAATGGATGCATATCGACTTAGCTGGTCCTGTCTGGAGTGATAAAAAGAAAAACGCCACG
GGTTTTGGTGTTTCAACTTTGGTGGAATGGGTGCTGAAGAACTCTACAAATTAG

Peptide Sequence

PEP ID

Solyc12g010040.2.1
PEP Infomation

leucine aminopeptidase A
Sequence

MAALRVSSALACSSSSSFHSYPSIFTKFQSSPIWSFSISVTPLCSRRAKRMAHSIARDTL
GLTHTNQSDAPKISFAAKEIDLVEWKGDILTVGATEKDLARDGNSKFQNPLLQKLDSKLS
GLLSEASSEEDFSGKAGQSTILRLPGLGSKRIALVGLGSPTSSTAAYRCLGEAAAAAAKS
AQASNIAIALASTDGLSAELKLSSASAITTGAVLGTFEDNRFKSESKKPTLKSLDILGLG
TGPEIEKKIKYAADVCAGVILGRELVNAPANVLTPAVLAEEAKKIASTYSDVFSANILDV
EQCKELKMGSYLAVAAASANPAHFIHLCYKPSSGEIKKKIALVGKGLTFDSGGYNIKTGP
GCSIELMKFDMGGAAAVLGAAKALGQIKPAGVEVHFIVAACENMISGTGMRPGDIITASN
GKTIEVNNTDAEGRLTLADALVYACNQGVEKIVDLATLTGACVVALGPSIAGIFTPSDDL
AKEVVAASEVSGEKLWRLPMEDSYWDSMKSGVADMVNTGGRPGGAITAALFLKQFVNEKV
QWMHIDLAGPVWSDKKKNATGFGVSTLVEWVLKNSTN*

Transcript Sequence

Transcript ID

Solyc12g010040.2.1
Transcript Infomation

leucine aminopeptidase A
Sequence

TCATTATCTTCTCAATTTGTCACTCAACAACAAGTCACACTGACCCTTTAGGTCTCTCTA
TCTACATATAAATACACAAAAAATTCCATTATCAATGGCCGCATTGAGAGTTTCTTCAGC
ATTGGCTTGTTCATCTTCTTCATCTTTTCACTCATACCCTTCAATTTTTACTAAATTTCA
ATCTAGTCCCATCTGGTCTTTTTCAATTTCAGTTACACCCTTGTGTTCAAGAAGAGCTAA
AAGAATGGCTCATTCTATTGCTCGTGATACTCTTGGTCTTACTCATACTAATCAAAGTGA
TGCTCCTAAGATTTCATTTGCTGCTAAAGAGATTGATCTGGTGGAATGGAAAGGAGACAT
ACTTACAGTAGGTGCCACAGAGAAGGACTTGGCTAGAGACGGGAATTCTAAGTTCCAGAA
TCCACTATTGCAAAAGCTAGATTCCAAATTGAGTGGCTTATTGTCTGAAGCTTCATCTGA
GGAGGATTTTAGTGGAAAGGCTGGACAATCCACAATTTTGAGGCTTCCTGGTCTTGGCTC
AAAAAGGATTGCTCTAGTTGGGCTTGGCTCACCAACATCATCAACTGCTGCTTATCGCTG
TTTAGGGGAGGCTGCTGCTGCAGCTGCCAAGTCTGCTCAGGCTAGTAATATCGCCATTGC
TCTTGCTTCTACGGATGGACTCTCTGCAGAGTTGAAGCTTAGCTCTGCCTCTGCCATAAC
AACTGGAGCTGTGCTGGGGACATTTGAAGATAATAGGTTTAAGTCAGAGTCAAAGAAACC
AACATTGAAATCTTTGGATATTCTTGGACTGGGTACTGGACCTGAGATAGAGAAGAAAAT
CAAGTATGCAGCAGATGTCTGTGCAGGTGTTATACTCGGAAGAGAGCTTGTCAATGCACC
CGCCAATGTTCTTACGCCTGCGGTACTTGCTGAAGAGGCCAAAAAGATTGCGTCCACTTA
TAGCGATGTCTTTTCTGCAAACATCTTGGATGTTGAGCAGTGCAAAGAATTGAAAATGGG
ATCCTATTTAGCTGTCGCTGCAGCTTCTGCAAATCCTGCTCATTTCATCCATTTGTGTTA
TAAGCCTAGTAGTGGAGAAATAAAAAAGAAGATAGCCTTGGTTGGAAAGGGATTAACTTT
TGACAGTGGTGGCTACAACATCAAGACTGGACCTGGTTGTTCTATTGAGCTAATGAAGTT
TGACATGGGAGGGGCTGCAGCTGTTTTGGGTGCAGCAAAAGCTCTTGGTCAGATAAAACC
CGCTGGAGTAGAGGTGCATTTCATTGTTGCAGCTTGTGAGAATATGATCAGTGGGACAGG
CATGAGGCCTGGAGACATTATCACTGCTTCAAATGGGAAGACAATTGAGGTTAACAACAC
GGATGCTGAGGGTAGACTCACACTTGCTGATGCGTTGGTATATGCCTGTAACCAAGGTGT
AGAAAAGATAGTTGATTTGGCAACATTAACTGGTGCTTGTGTGGTTGCTCTTGGGCCTTC
AATTGCTGGTATTTTTACACCTAGCGATGACCTAGCTAAGGAGGTGGTTGCAGCTTCTGA
GGTAAGCGGTGAAAAACTATGGAGGTTGCCGATGGAGGATAGCTACTGGGACTCTATGAA
ATCAGGAGTGGCTGATATGGTGAACACGGGAGGTCGTCCAGGTGGTGCGATAACCGCTGC
TCTCTTCCTGAAGCAGTTTGTTAACGAGAAGGTCCAATGGATGCATATCGACTTAGCTGG
TCCTGTCTGGAGTGATAAAAAGAAAAACGCCACGGGTTTTGGTGTTTCAACTTTGGTGGA
ATGGGTGCTGAAGAACTCTACAAATTAGAACCAGTCATCATCTGATGGCTAAAACATATG
AGGGAGTTATGTTTTACCATTTTATAAGAAAAAAAAACTTATGAAAAGTTGTAATCTCAA
GGGACTTATGGATGTTTGAGAAAAGAATTTGCATCAAGTTTTTATGAATAAATTTGGGGT
GAAAATGGTGGAAAAGAAAAGGCACTAGTAGACTTAGATATTGATTTATAAAATGCCTAA
TATTGCCATCTTACATATGGAATTTATTACCCCTATCCTATTCATGC