Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g009900.2.1
CDS Infomation

zein-binding protein (Protein of unknown function, DUF593) (AHRD V3.3 *-* AT5G57830.1)
Sequence

ATGGCTGATATTGGCAAGGCAGTGTCTCGATTCGACGTAGAATCGTTACAAGAAATGCTT
TGTTTTCAAGAACAACTTATAGAGAAGTTGTACAATGAGTTGGATGAAGAAAGTGAAGCC
TCATCTACTGCAGCAACAGAGGCGTTATCGATGATTTTACGTTTACAAGGTGAAAAGGCT
GCAGAGGAAATGGAAGCAGAACAGTATAAGAGATTTGTAGAAGAAAAAATGAGTCATGCT
GAAGAATCATTATGTGTTTTACAAGAACTTATTGATCAAAAACAGATAAAGATAGATGAA
TTGGATCATCAGGCACAAGATTATCGATATAAGCTCGTGAGTATGGGCTATGATGACGAT
ATTGATGATAGTGAGCTCGAATATTTCGAGGATTTAGAAGGGAAATTGATTGTTCAGTCT
ATTGGGAGGTGTAAATCTACTCCGAATATCCCATTGAAAGATGATAACATGAAAAAGGAT
GATCTTAAAGACGAAAATATCAGTCCAAAACGCGATATGAATGATGTTCCAATGGTTGGG
AGTATAAGTGTGTACTGTGAGCAGATGGAAAAGTTGGAACAAAGAGTGAAACAGATTGCT
GGTGCTAATAACTACGCGAAATTGTCTAGTTTACCAATTTCTAAAAGAAGCTCTTGTAAC
AATTTCTTGGAGCAATTTAAAGAAACGTACATCGTTCAGCATCGAGTGAATAAATCAGAT
AACGAAGCTGCTGCTAGTCGATCTGTTTCTCCTCCGAATGTTCTTGATGTCTTTGAAGTC
CCTCGAGCCATTAAAGATGAAGATTTTGTTGTCCGAAAGGAGGCTGAAAGGCTTGTTAAA
GATGAAACTGATTGGCATAAGAAATATTTAATACCTATGCAGCATTTGGATATTTGTCCT
ACAACTAGTGCTTCCGAAACAGCAGAGATTCGTCATTTCAATAGGACGGTGTTTGAGATA
GATGAAGTCGAGAGACAAGGTACGAGGCAAGAACCCGATAAACACGAAGAGCTAATGATG
TTACATGACATTAAGGAGAAACTAAATTTAGAACCTTTAAAGCATTTGAAAGTTTGTCCA
ATGACTAGTGATTCAGAAACAGAAGAGATTCGTCGTGTCAATAGGAGCACGTTTAAGAAA
ACTGAAGTTGAGAGACAAGGTACGAGGCAAGAACCCAACAGACACAAAGAGCTAATGTTG
TTACATGACAGGAAGGAGCAACTAAATTTAGTACCTATAAAGCATTTGAAAAATTGTCCA
ATGACTCATGCTTCGGAAACAGCAGAGATTCGTCATGTCAATAAGAAGTTTGAGATAGCT
GAAGTCGAGAGACATGATACGAGGCAAGAACCCGAGAGAAACAAAGAGTTAATGTTGCTA
CATGACAGGAAGGAGCAACTAAATATAGTACCTATAAGGCATTTGAATAATTGTCCAATG
ACTAATGCTTCAGAAACAGCAGAGATTCATCGTGTCAATAAGAAGTTTGAGATAGCTGAA
GTCGAGAGAGATGGTACGAGGAAAGTCGAGAGACATGGTACGAGGCAAGAGACAGAGAGA
CACAAAGAGATAATGTTGTTACATGACATTAAGGAGCAACTTAATTTACTACCTATGCAG
AATGAGGACAAGTTACATAGAGTAGGTGAAGCTACTTCTCCTACCACTAGTGTTTCAGAA
ACAGCAGAGATTCGTCCTGTCAATAGGACGACGCTTGAGATAACTGAAGTTGATAGACAA
CGTATGAGGCAAGAATCCAACAGACACGAACAGCTAACGTTGTTATATGAGATCAAGGAG
CAACTAAATTTGATGCAATCCGACATTAGAACGTGGAAAAATATCAAGTCCTCTCCAAGA
GATGAGCCATCTGTAGATTCTCTAACAGAAGTGATGGCTTGCTTTTGGATGTGA

Peptide Sequence

PEP ID

Solyc12g009900.2.1
PEP Infomation

zein-binding protein (Protein of unknown function, DUF593) (AHRD V3.3 *-* AT5G57830.1)
Sequence

MADIGKAVSRFDVESLQEMLCFQEQLIEKLYNELDEESEASSTAATEALSMILRLQGEKA
AEEMEAEQYKRFVEEKMSHAEESLCVLQELIDQKQIKIDELDHQAQDYRYKLVSMGYDDD
IDDSELEYFEDLEGKLIVQSIGRCKSTPNIPLKDDNMKKDDLKDENISPKRDMNDVPMVG
SISVYCEQMEKLEQRVKQIAGANNYAKLSSLPISKRSSCNNFLEQFKETYIVQHRVNKSD
NEAAASRSVSPPNVLDVFEVPRAIKDEDFVVRKEAERLVKDETDWHKKYLIPMQHLDICP
TTSASETAEIRHFNRTVFEIDEVERQGTRQEPDKHEELMMLHDIKEKLNLEPLKHLKVCP
MTSDSETEEIRRVNRSTFKKTEVERQGTRQEPNRHKELMLLHDRKEQLNLVPIKHLKNCP
MTHASETAEIRHVNKKFEIAEVERHDTRQEPERNKELMLLHDRKEQLNIVPIRHLNNCPM
TNASETAEIHRVNKKFEIAEVERDGTRKVERHGTRQETERHKEIMLLHDIKEQLNLLPMQ
NEDKLHRVGEATSPTTSVSETAEIRPVNRTTLEITEVDRQRMRQESNRHEQLTLLYEIKE
QLNLMQSDIRTWKNIKSSPRDEPSVDSLTEVMACFWM*

Transcript Sequence

Transcript ID

Solyc12g009900.2.1
Transcript Infomation

zein-binding protein (Protein of unknown function, DUF593) (AHRD V3.3 *-* AT5G57830.1)
Sequence

AGTCAAGGTAATGATATATTTGCCCAAATCTATTAATTATGGATTTGGAAGAGACAAAGG
AAAAAAAAAAACTTATTCGCATTTAATATTTAAATCACTTAATTTGATGTAAACACTAAA
TGCGGATTCATGATGGAGGATTTGTTTTACTTTTCATTTTGTAAAACACAAATTACATCA
AAAACAATACTGTCATGAAAAAAGTATAAAAAAAAATCAATTTTTTTTTTGATCTGAAAA
ATCTCCCTAGAGGAAAGAAAATCAATTTATATTATCTTTGCCTATTTGATTATCTTCCTC
TAGTGGAGATTTTTCTATTTTCATTGATCCTTTATTCAACAATCACAAATTCTTTTTATC
TTAAATAACTTTTTTTTCTTGTTAATTTTGTGATTTCTTAGAAAATAAATTTAAATATTT
GAGGTTTAATTTCTTCATACCTGAAAATAATAAATTTGGATTTTTTTTTGTCTAGTAAAT
TATTAGATAATTTCTTGTTGAATGTGCAATAGGATGATTTAAGTGCAATTATATACATTT
TGTTAGGTGATTCACATAGTAGTATTAGCGAAATCAGAAATTTTGTTAACGGTGTTATTT
TGACCTGTATACATATAGTATAATTTTTGACGAAGAATGTTCATCTGATTACACATTTTT
GTATCACCTATTAGAGATATAAACAAGATTGTTTTTTTTTTGTTACGTTTGATGGCTGAT
ATTGGCAAGGCAGTGTCTCGATTCGACGTAGAATCGTTACAAGAAATGCTTTGTTTTCAA
GAACAACTTATAGAGAAGTTGTACAATGAGTTGGATGAAGAAAGTGAAGCCTCATCTACT
GCAGCAACAGAGGCGTTATCGATGATTTTACGTTTACAAGGTGAAAAGGCTGCAGAGGAA
ATGGAAGCAGAACAGTATAAGAGATTTGTAGAAGAAAAAATGAGTCATGCTGAAGAATCA
TTATGTGTTTTACAAGAACTTATTGATCAAAAACAGATAAAGATAGATGAATTGGATCAT
CAGGCACAAGATTATCGATATAAGCTCGTGAGTATGGGCTATGATGACGATATTGATGAT
AGTGAGCTCGAATATTTCGAGGATTTAGAAGGGAAATTGATTGTTCAGTCTATTGGGAGG
TGTAAATCTACTCCGAATATCCCATTGAAAGATGATAACATGAAAAAGGATGATCTTAAA
GACGAAAATATCAGTCCAAAACGCGATATGAATGATGTTCCAATGGTTGGGAGTATAAGT
GTGTACTGTGAGCAGATGGAAAAGTTGGAACAAAGAGTGAAACAGATTGCTGGTGCTAAT
AACTACGCGAAATTGTCTAGTTTACCAATTTCTAAAAGAAGCTCTTGTAACAATTTCTTG
GAGCAATTTAAAGAAACGTACATCGTTCAGCATCGAGTGAATAAATCAGATAACGAAGCT
GCTGCTAGTCGATCTGTTTCTCCTCCGAATGTTCTTGATGTCTTTGAAGTCCCTCGAGCC
ATTAAAGATGAAGATTTTGTTGTCCGAAAGGAGGCTGAAAGGCTTGTTAAAGATGAAACT
GATTGGCATAAGAAATATTTAATACCTATGCAGCATTTGGATATTTGTCCTACAACTAGT
GCTTCCGAAACAGCAGAGATTCGTCATTTCAATAGGACGGTGTTTGAGATAGATGAAGTC
GAGAGACAAGGTACGAGGCAAGAACCCGATAAACACGAAGAGCTAATGATGTTACATGAC
ATTAAGGAGAAACTAAATTTAGAACCTTTAAAGCATTTGAAAGTTTGTCCAATGACTAGT
GATTCAGAAACAGAAGAGATTCGTCGTGTCAATAGGAGCACGTTTAAGAAAACTGAAGTT
GAGAGACAAGGTACGAGGCAAGAACCCAACAGACACAAAGAGCTAATGTTGTTACATGAC
AGGAAGGAGCAACTAAATTTAGTACCTATAAAGCATTTGAAAAATTGTCCAATGACTCAT
GCTTCGGAAACAGCAGAGATTCGTCATGTCAATAAGAAGTTTGAGATAGCTGAAGTCGAG
AGACATGATACGAGGCAAGAACCCGAGAGAAACAAAGAGTTAATGTTGCTACATGACAGG
AAGGAGCAACTAAATATAGTACCTATAAGGCATTTGAATAATTGTCCAATGACTAATGCT
TCAGAAACAGCAGAGATTCATCGTGTCAATAAGAAGTTTGAGATAGCTGAAGTCGAGAGA
GATGGTACGAGGAAAGTCGAGAGACATGGTACGAGGCAAGAGACAGAGAGACACAAAGAG
ATAATGTTGTTACATGACATTAAGGAGCAACTTAATTTACTACCTATGCAGAATGAGGAC
AAGTTACATAGAGTAGGTGAAGCTACTTCTCCTACCACTAGTGTTTCAGAAACAGCAGAG
ATTCGTCCTGTCAATAGGACGACGCTTGAGATAACTGAAGTTGATAGACAACGTATGAGG
CAAGAATCCAACAGACACGAACAGCTAACGTTGTTATATGAGATCAAGGAGCAACTAAAT
TTGATGCAATCCGACATTAGAACGTGGAAAAATATCAAGTCCTCTCCAAGAGATGAGCCA
TCTGTAGATTCTCTAACAGAAGTGATGGCTTGCTTTTGGATGTGATCCAGCTATCAAAGT
TTTGCTTATAATGGCTTTTGAGTTGAGACAATCAGTGTCCG