Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc12g009830.2.1
CDS Infomation	RING/U-box superfamily protein, putative (AHRD V3.3 *** A0A061GPA7_THECC)
Sequence	ATGGGGAAGAGAAAGAGAAGAGCTGATCTCAATAAAACTCATTCTCTTACTGACCAGCTG CCTCCACCTGGAATGGATGCCTTGTCGAGACAGACCTCTCATCAAGTTGATGTCTATGCA ACAAAGTCTTTCTCATCAATTATGGATATCATAGATGATTCTTCAAAGGCAACACAATGT CAACAACCATCCATTGTTCACCGTCGAAATATTGACCAGGCAATGTGTTCAAAGAATCCT CATCACTACTATGGGCTCCATTATACTCGACGGAGGTCTTCTAATAATGCTGAGGCATCA ACTTCCCGTGGTGGGACCACTTCTTTTTATGATGAGCTGATGTCTGCAAAGTCAGCTAGT AAATGCAACTCGGATTCTGGACATGACACAGAGAGTAAACCTCAAAAACCAGAAAGTGTT GGCGTTGCGCCCAGTTTACTGGCAACAAATGCAACGTCTTCCAACGTCACCAAGCAGTTT TGCGGATTATGTCAGAAGCCTTTGAGAAAGAAACACTATATGCTCGATAGCAACATACCT TCCTACGAGCCCTCTGTTGTGGCAGTTTTAGTTTGTGGTCATCTTTACCATGCTGATTGT TTGGAGGAAAGAACTCATCATGACAATGCAACAGATCCTCCCTGCCCGATCTGTCGTGGC ATCAATTGA

Peptide Sequence

PEP ID	Solyc12g009830.2.1
PEP Infomation	RING/U-box superfamily protein, putative (AHRD V3.3 *** A0A061GPA7_THECC)
Sequence	MGKRKRRADLNKTHSLTDQLPPPGMDALSRQTSHQVDVYATKSFSSIMDIIDDSSKATQC QQPSIVHRRNIDQAMCSKNPHHYYGLHYTRRRSSNNAEASTSRGGTTSFYDELMSAKSAS KCNSDSGHDTESKPQKPESVGVAPSLLATNATSSNVTKQFCGLCQKPLRKKHYMLDSNIP SYEPSVVAVLVCGHLYHADCLEERTHHDNATDPPCPICRGIN*

Transcript Sequence

Transcript ID	Solyc12g009830.2.1
Transcript Infomation	RING/U-box superfamily protein, putative (AHRD V3.3 *** A0A061GPA7_THECC)
Sequence	CCCCCAAAGAATCCATTTTTTCCCAAATTAAGCAATTAACTACCCAAAACCCCAAAAATT AGTGGCTAAATAGCCACTGATTTTCTAAAAAGTTTTAATCTTGTTGAGTTTACATGAAAT TGGCTTTGTGGGTGTGTGTTTAAAACTTATGGGGAAGAGAAAGAGAAGAGCTGATCTCAA TAAAACTCATTCTCTTACTGACCAGCTGCCTCCACCTGGAATGGATGCCTTGTCGAGACA GACCTCTCATCAAGTTGATGTCTATGCAACAAAGTCTTTCTCATCAATTATGGATATCAT AGATGATTCTTCAAAGGCAACACAATGTCAACAACCATCCATTGTTCACCGTCGAAATAT TGACCAGGCAATGTGTTCAAAGAATCCTCATCACTACTATGGGCTCCATTATACTCGACG GAGGTCTTCTAATAATGCTGAGGCATCAACTTCCCGTGGTGGGACCACTTCTTTTTATGA TGAGCTGATGTCTGCAAAGTCAGCTAGTAAATGCAACTCGGATTCTGGACATGACACAGA GAGTAAACCTCAAAAACCAGAAAGTGTTGGCGTTGCGCCCAGTTTACTGGCAACAAATGC AACGTCTTCCAACGTCACCAAGCAGTTTTGCGGATTATGTCAGAAGCCTTTGAGAAAGAA ACACTATATGCTCGATAGCAACATACCTTCCTACGAGCCCTCTGTTGTGGCAGTTTTAGT TTGTGGTCATCTTTACCATGCTGATTGTTTGGAGGAAAGAACTCATCATGACAATGCAAC AGATCCTCCCTGCCCGATCTGTCGTGGCATCAATTGAGTAGGTTTGCTTCTCTACCTGAA TGTAGATAACCTCAGATGCAGATTCAGGATTTGAAAAGCTCCGAGTTGTGTAGACATATA TACATATGTCTTAAGATCTCGATACAATGTAACTATCTGTTATGTTTATATATAGTTCGA GTCAAAGGTGCGCGTTTAATCTTTTGGATACCAGATGTATTGAGAGGGCAATGTAGCTTA CAAGATGCATCAACAATCAGTATAAACTTTTCAGTGTTTTCTTTGAAAATATTTGTGATG TATTAGTCTAACTCTAATAGAATTTATATAAGTCATTAGTTTATGACAAGTTGATGGATT ATACTATCTTAAACGGCAGGTCGTTTGGTACGTAATATAAGGTGAGATATATCAAGAGAT TAAAATTATATTTTGTTTGGTTGGAGGTGTAAATGTATACCTTCAATTAAACATAGTATA TATTTAATCGTAACGTTAATTTTGGATTTATACCTTCAACCAAATGGAATATAAATATGA GCGCAACCTTATTTTTGGATATCTCACTTTATTTCTTCTAATTTGATATTATTTTATTCT ACCTTCGAAATATCGTTTCTCATTAAAATAACTTTGTCTACGAACCAAACAACTCCGAAA GTTAATAATCTTTGAAAATGGTAACAGACAACACCATGTGTACCTGATTTGTGACTTTCC TTTTTCTGTCTTTTTCTACTATTTTAACTTTTTTCTAATAAAGGCATATTCCTTAAAAGT TTTAAATTTAAAATTTTGAAATTTCAAAAAGGTACCTTCCTTTTTTTTTTGGGACTAAAT ACAACTCAATAAACTTGGCAATGGCCCATAAAAACTATGTATTATATCATATTATAAGAT TTTAATTCTCATTGAATGTATGCAAACATCTGTCAAAAGACATATGGAAGGACCACCACA TTGTATTTTTTTTACAAATCAACTTCAAAATCAAATTTCAAACATTTTAATTTACGTGAC ATAATTTAATTAGACATAAATATATAAAAATTTAATATTTAATATTTTCGGCTCGAACAG TAAAAATCTATAG