Plant GARDEN
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g009610.2.1
CDS Infomation

RabGAP/TBC domain-containing protein (AHRD V3.3 *** AT5G52580.1)
Sequence

ATGCATGAAATTGACGTTCACGATCTCTCCGACGACGCCGATTATGCTGCGTCTGTTCAG
CAAGGTTCGGCGAGCATGAATAGGAGCAATAGCAGTAAGCAGGGTTCATCAGGTGAACAG
GAAGGCGCTGAAATAGTGTATGTGAAAGATAATGTGGCAATTCATCCAACTCAGTATGCC
TCAGAGAGGATTAGTGGTCGACTAAAGCTGATCAAGCAAGGAGGTTCTCTGTTTATGACT
TGGATTCCATATAAAGGACAAAGCTCGAGTGCAAGGTTGTCTGAAAAAGATAAGAGTCTT
TACACTATACGAGCAGTTCCATTTTCGGATGTTAGATCAATTCGACGACACACTCCGACC
CTGGGGTGGCAATATGTTATTGTAGTTTTGTCATCAGGACTAGCATTTCCTCCGCTTTAT
TTCTACAATGGCGGTGTGCGGGAGTTTCTTGCAACAATTAAGCAGCATGCTTATCTTGTG
AGATCAGCCGATGATGCTAATGTATTTCTTGTCAACGACTTTCAAGATCCACTCCAGAGA
ACTCTCTCCTCCTTGGAACTTCCTAGGGCTGTTTCTGTAACTAACAGTCCATCATCAGCT
GCACCTAGCGAATCCCCATCTAGCTGGACAGAGGGGGAAACTTTTGATAGAAATTCTGCA
CTTGCTCAACAAAATGCCAGGCAAAGACAAAAACATAATGATCCTGCTCGAGATTTGTCA
ATTCAAGTACTAGAGAAATTTTCTCTTGTGACCAGATTTGCTCGTGAAACGACATCACAA
CTTTTTGGTGAAGCTCAGGGAGATAGTTTTGTCTCTAATGACAGGAGGAATCACGATGGA
AAAACATATGATTATCCTCGCATTGCCGAATCTAATGATGCTCAGAAGCTTCCTGAGGAT
GTCCCGGTGCCTGCGGATCCCTTGGAGTTTGACAAACTGTCACTAGTATGGGGAAAACCA
CGGCAACCCCCCTTGGGAACAGAAGAGTGGTCTGCTTTCCTGGACACCGAAGGGAGAGTC
ACAGACTCAGAAGCAGTAAGAAAGAGAATATTTTATGGTGGAGTGGAACCAGATCTACGT
AAAGAGGTGTGGCAATTTCTGTTGGGATACCATTCATATGATTCAACTTATGCAGAGAGG
GAATACCTTGTGTCCGTCAAAAAGTCAGAATATGAAACGATAAAAAACCAATGGAAGAGC
ATCTCTAAGGAGCAGGCAAAAAGATTTACAAAATTCCGAGAGAGGAGAGGCCTCATTGAA
AAAGATGTGGTGAGGACTGATAGGTCAGTTTCATTCTATGAAGAGGATGACAACCCAAAC
ATTAAATGTTTGCGTGATATACTGCTGACATACTCATTCTACAACTTTGATTTGGGTTAC
TGTCAGGGTATGAGCGATCTCCTTTCACCAATATTGTTTATTATGGGAGATGAATCAGAA
ACATTTTGGTGCTTTGTGGCGTTGATGGAACGACTTGGACCAAACTTTAACCGTGACCAA
AATGGAATGCACTCTCAGCTTTTTGCATTATCAAAGTTGGTCGAGTTGTTGGACATCCCT
CTGCATAATTACTTCAAACAGAAGGACTGTTTGAATTATTTCTTCTGCTTCCGATGGGTT
CTTATTCAATTCAAAAGGGAGTTTGAATTTGAACAAACGATGCGATTGTGGGAGGTATTA
TGGACGCATTATGGGAGCGAGCACCTTCATCTGTATGTGTGTGTCGCGATTCTGAAAAGA
CATCGCAGCAAAATAATAGGAGAGGGGATGGATTTCGACACACTACTGAAATTTATCAAC
GAGCTGAGTGGTCATATTGACCTAGATGCTATCCTCAGGGATGCAGAGGCTCTGTGTATA
TGTGCCGGCGAAAATGGTGAATCCTGCATCCCTCCTGGAACTCCACCTTCATTACCAGTT
GACGATGCTTCAATGTATTACCAACAAGATGATGATGATCATATGTTATAA

Peptide Sequence

PEP ID

Solyc12g009610.2.1
PEP Infomation

RabGAP/TBC domain-containing protein (AHRD V3.3 *** AT5G52580.1)
Sequence

MHEIDVHDLSDDADYAASVQQGSASMNRSNSSKQGSSGEQEGAEIVYVKDNVAIHPTQYA
SERISGRLKLIKQGGSLFMTWIPYKGQSSSARLSEKDKSLYTIRAVPFSDVRSIRRHTPT
LGWQYVIVVLSSGLAFPPLYFYNGGVREFLATIKQHAYLVRSADDANVFLVNDFQDPLQR
TLSSLELPRAVSVTNSPSSAAPSESPSSWTEGETFDRNSALAQQNARQRQKHNDPARDLS
IQVLEKFSLVTRFARETTSQLFGEAQGDSFVSNDRRNHDGKTYDYPRIAESNDAQKLPED
VPVPADPLEFDKLSLVWGKPRQPPLGTEEWSAFLDTEGRVTDSEAVRKRIFYGGVEPDLR
KEVWQFLLGYHSYDSTYAEREYLVSVKKSEYETIKNQWKSISKEQAKRFTKFRERRGLIE
KDVVRTDRSVSFYEEDDNPNIKCLRDILLTYSFYNFDLGYCQGMSDLLSPILFIMGDESE
TFWCFVALMERLGPNFNRDQNGMHSQLFALSKLVELLDIPLHNYFKQKDCLNYFFCFRWV
LIQFKREFEFEQTMRLWEVLWTHYGSEHLHLYVCVAILKRHRSKIIGEGMDFDTLLKFIN
ELSGHIDLDAILRDAEALCICAGENGESCIPPGTPPSLPVDDASMYYQQDDDDHML*

Transcript Sequence

Transcript ID

Solyc12g009610.2.1
Transcript Infomation

RabGAP/TBC domain-containing protein (AHRD V3.3 *** AT5G52580.1)
Sequence

CATAAGAGATTTTTTTTTCTTTTTTCTTTGTCACCCAAAAACCGTCAGCTATTCCTTCGT
CTCTAAGAGAAGCTTTCTACTTCACCCCCTCTCCCCCCACCCCAAACCCAAACACACACC
GCCCCGGCAATTGCCTACCTTAATTTTCCGGCGATGCATGAAATTGACGTTCACGATCTC
TCCGACGACGCCGATTATGCTGCGTCTGTTCAGCAAGGTTCGGCGAGCATGAATAGGAGC
AATAGCAGTAAGCAGGGTTCATCAGGTGAACAGGAAGGCGCTGAAATAGTGTATGTGAAA
GATAATGTGGCAATTCATCCAACTCAGTATGCCTCAGAGAGGATTAGTGGTCGACTAAAG
CTGATCAAGCAAGGAGGTTCTCTGTTTATGACTTGGATTCCATATAAAGGACAAAGCTCG
AGTGCAAGGTTGTCTGAAAAAGATAAGAGTCTTTACACTATACGAGCAGTTCCATTTTCG
GATGTTAGATCAATTCGACGACACACTCCGACCCTGGGGTGGCAATATGTTATTGTAGTT
TTGTCATCAGGACTAGCATTTCCTCCGCTTTATTTCTACAATGGCGGTGTGCGGGAGTTT
CTTGCAACAATTAAGCAGCATGCTTATCTTGTGAGATCAGCCGATGATGCTAATGTATTT
CTTGTCAACGACTTTCAAGATCCACTCCAGAGAACTCTCTCCTCCTTGGAACTTCCTAGG
GCTGTTTCTGTAACTAACAGTCCATCATCAGCTGCACCTAGCGAATCCCCATCTAGCTGG
ACAGAGGGGGAAACTTTTGATAGAAATTCTGCACTTGCTCAACAAAATGCCAGGCAAAGA
CAAAAACATAATGATCCTGCTCGAGATTTGTCAATTCAAGTACTAGAGAAATTTTCTCTT
GTGACCAGATTTGCTCGTGAAACGACATCACAACTTTTTGGTGAAGCTCAGGGAGATAGT
TTTGTCTCTAATGACAGGAGGAATCACGATGGAAAAACATATGATTATCCTCGCATTGCC
GAATCTAATGATGCTCAGAAGCTTCCTGAGGATGTCCCGGTGCCTGCGGATCCCTTGGAG
TTTGACAAACTGTCACTAGTATGGGGAAAACCACGGCAACCCCCCTTGGGAACAGAAGAG
TGGTCTGCTTTCCTGGACACCGAAGGGAGAGTCACAGACTCAGAAGCAGTAAGAAAGAGA
ATATTTTATGGTGGAGTGGAACCAGATCTACGTAAAGAGGTGTGGCAATTTCTGTTGGGA
TACCATTCATATGATTCAACTTATGCAGAGAGGGAATACCTTGTGTCCGTCAAAAAGTCA
GAATATGAAACGATAAAAAACCAATGGAAGAGCATCTCTAAGGAGCAGGCAAAAAGATTT
ACAAAATTCCGAGAGAGGAGAGGCCTCATTGAAAAAGATGTGGTGAGGACTGATAGGTCA
GTTTCATTCTATGAAGAGGATGACAACCCAAACATTAAATGTTTGCGTGATATACTGCTG
ACATACTCATTCTACAACTTTGATTTGGGTTACTGTCAGGGTATGAGCGATCTCCTTTCA
CCAATATTGTTTATTATGGGAGATGAATCAGAAACATTTTGGTGCTTTGTGGCGTTGATG
GAACGACTTGGACCAAACTTTAACCGTGACCAAAATGGAATGCACTCTCAGCTTTTTGCA
TTATCAAAGTTGGTCGAGTTGTTGGACATCCCTCTGCATAATTACTTCAAACAGAAGGAC
TGTTTGAATTATTTCTTCTGCTTCCGATGGGTTCTTATTCAATTCAAAAGGGAGTTTGAA
TTTGAACAAACGATGCGATTGTGGGAGGTATTATGGACGCATTATGGGAGCGAGCACCTT
CATCTGTATGTGTGTGTCGCGATTCTGAAAAGACATCGCAGCAAAATAATAGGAGAGGGG
ATGGATTTCGACACACTACTGAAATTTATCAACGAGCTGAGTGGTCATATTGACCTAGAT
GCTATCCTCAGGGATGCAGAGGCTCTGTGTATATGTGCCGGCGAAAATGGTGAATCCTGC
ATCCCTCCTGGAACTCCACCTTCATTACCAGTTGACGATGCTTCAATGTATTACCAACAA
GATGATGATGATCATATGTTATAA