Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g009590.2.1
CDS Infomation

Methyl-CpG-binding domain protein (AHRD V3.3 *-* G7JE44_MEDTR)
Sequence

ATGGCGAAATCAGTGGAGAAAAATGAAGTTGTGTCTATTGAGCTTCCAGCTCCTTCTGGT
TGGAGCAAGAAGTTTCTGCCTAAAAAAGGAGGTACTCCCAAGAAGAATGATATCGTATTT
ACTGCACCAACAGGAGAGGAGATCACCACAAGAAAACAGTTGGAACAGTACCTGAAGTCA
CACCCTGGTGGTCCACCAGTAGCGGAGTTTGATTGGGGAACTGGTGAAACCCCAAGAAGA
TCGGCGAGGATCACTGGAAAGGCAAAGGCAACTCAATCTCCTACAGAAAGTGAACCTGCT
AAGAAACGAGGCAGAAAGTCTTCAGCTTCGAAGAAGGATTCCAAAGACAAAGAAGTCACT
AAAGAAACTGAAGCAGCAAAGGATGATGACATGGAGGAAGCTGAAAAGCACGAGAAGGAC
ACTGCAGCAATGGAATCTGAGGAAGATGTTGAAAAAAAAGAAAATGAGAACCCAAATGAA
ACTCAAGATGGAGAAAGCGAAGTGGAGAAGAAAGATGAAATCCAATCTTCTGAGAAGGAT
GTTGTGAAGGAGAACTTAGATGAAGGCCAAAATGTTCATGACAAAGTAGAAGATGCTCAA
GTTGAGAAAGACGTTCAGATGGCTGATAATGTTGGACCTTCTCAAGATGTTGAAGAGGCT
CCTGTTGTTAAAGCAGCTGATGGTCCTGACGCTACTAAAATTAACGAGGAGGAAAAGGAT
GTACAGGTTCAAGAAGTAGAAAAGGTACCTACTGAAGAAGCTCACATCGAGAAAGATGTT
AAGATGGCTGATAATGATGTTGAAGAGGAGACCCCTGCTGATAAAACAGCTGTTGGTCCT
GAAGCTACTAATATTAACGAGGAGGGAAAGGATGTACAGGTTCAAGAAGTGGAAATATTA
CCTACCGAGGAAGCTCAGGTTGAGAAAGATGTCAAAATGACTGATAACATTGGACATCCA
GACGTTGTTGAAGAAACCCCTGCTGATGTTCCTGAAGCTACTAAACTAAATGAGGAGGAA
AAGGATGTACAGATTCAAGAATCAGAAAACAAACCTAATGAAGAAGCTCAGGTTGAAAAA
GATGTCAACAATGTTGAAGAGGCTCTTGCTGAAAAAGCAGCGGAGGAAAAGGATGTACAG
GTTCAAGAAGCAGAAAAAGTAGATCCTAGCGCTGCTGAGGAGTTGAAGCATCAAGCAGAA
GGAAAGAGTACTGATGATCAAGATAATTTGATGAACATTGAAATAAGTAAGGTGGAGGGA
GAAGTAACTGAGAATGGCAGCAATGCCAACGAGGCCAAGCCTTGA

Peptide Sequence

PEP ID

Solyc12g009590.2.1
PEP Infomation

Methyl-CpG-binding domain protein (AHRD V3.3 *-* G7JE44_MEDTR)
Sequence

MAKSVEKNEVVSIELPAPSGWSKKFLPKKGGTPKKNDIVFTAPTGEEITTRKQLEQYLKS
HPGGPPVAEFDWGTGETPRRSARITGKAKATQSPTESEPAKKRGRKSSASKKDSKDKEVT
KETEAAKDDDMEEAEKHEKDTAAMESEEDVEKKENENPNETQDGESEVEKKDEIQSSEKD
VVKENLDEGQNVHDKVEDAQVEKDVQMADNVGPSQDVEEAPVVKAADGPDATKINEEEKD
VQVQEVEKVPTEEAHIEKDVKMADNDVEEETPADKTAVGPEATNINEEGKDVQVQEVEIL
PTEEAQVEKDVKMTDNIGHPDVVEETPADVPEATKLNEEEKDVQIQESENKPNEEAQVEK
DVNNVEEALAEKAAEEKDVQVQEAEKVDPSAAEELKHQAEGKSTDDQDNLMNIEISKVEG
EVTENGSNANEAKP*

Transcript Sequence

Transcript ID

Solyc12g009590.2.1
Transcript Infomation

Methyl-CpG-binding domain protein (AHRD V3.3 *-* G7JE44_MEDTR)
Sequence

GGGAAATTTTGGTTAGGTGGGAAATGGCGAAATCAGTGGAGAAAAATGAAGTTGTGTCTA
TTGAGCTTCCAGCTCCTTCTGGTTGGAGCAAGAAGTTTCTGCCTAAAAAAGGAGGTACTC
CCAAGAAGAATGATATCGTATTTACTGCACCAACAGGAGAGGAGATCACCACAAGAAAAC
AGTTGGAACAGTACCTGAAGTCACACCCTGGTGGTCCACCAGTAGCGGAGTTTGATTGGG
GAACTGGTGAAACCCCAAGAAGATCGGCGAGGATCACTGGAAAGGCAAAGGCAACTCAAT
CTCCTACAGAAAGTGAACCTGCTAAGAAACGAGGCAGAAAGTCTTCAGCTTCGAAGAAGG
ATTCCAAAGACAAAGAAGTCACTAAAGAAACTGAAGCAGCAAAGGATGATGACATGGAGG
AAGCTGAAAAGCACGAGAAGGACACTGCAGCAATGGAATCTGAGGAAGATGTTGAAAAAA
AAGAAAATGAGAACCCAAATGAAACTCAAGATGGAGAAAGCGAAGTGGAGAAGAAAGATG
AAATCCAATCTTCTGAGAAGGATGTTGTGAAGGAGAACTTAGATGAAGGCCAAAATGTTC
ATGACAAAGTAGAAGATGCTCAAGTTGAGAAAGACGTTCAGATGGCTGATAATGTTGGAC
CTTCTCAAGATGTTGAAGAGGCTCCTGTTGTTAAAGCAGCTGATGGTCCTGACGCTACTA
AAATTAACGAGGAGGAAAAGGATGTACAGGTTCAAGAAGTAGAAAAGGTACCTACTGAAG
AAGCTCACATCGAGAAAGATGTTAAGATGGCTGATAATGATGTTGAAGAGGAGACCCCTG
CTGATAAAACAGCTGTTGGTCCTGAAGCTACTAATATTAACGAGGAGGGAAAGGATGTAC
AGGTTCAAGAAGTGGAAATATTACCTACCGAGGAAGCTCAGGTTGAGAAAGATGTCAAAA
TGACTGATAACATTGGACATCCAGACGTTGTTGAAGAAACCCCTGCTGATGTTCCTGAAG
CTACTAAACTAAATGAGGAGGAAAAGGATGTACAGATTCAAGAATCAGAAAACAAACCTA
ATGAAGAAGCTCAGGTTGAAAAAGATGTCAACAATGTTGAAGAGGCTCTTGCTGAAAAAG
CAGCGGAGGAAAAGGATGTACAGGTTCAAGAAGCAGAAAAAGTAGATCCTAGCGCTGCTG
AGGAGTTGAAGCATCAAGCAGAAGGAAAGAGTACTGATGATCAAGATAATTTGATGAACA
TTGAAATAAGTAAGGTGGAGGGAGAAGTAACTGAGAATGGCAGCAATGCCAACGAGGCCA
AGCCTTGAGCAGTGGTTCTCTCTAACTCTAACATTTTGCTCTTTTTGCTTCATTTGGATG
ACTGTAGTGTTGTCAATTATAGATACTCTGATTGTTCATGAGAGACATCTGTATGCAAAA
CCATAGATTTAGGTCCTAAATATTGCTCTGTAAGGATTTTATCGCCTGTACCAGTACTAC
TGTATGCCATAGATT