Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g009150.2.1
CDS Infomation

TRICHOME BIREFRINGENCE-LIKE 16 (AHRD V3.3 *** AT5G20680.5)
Sequence

ATGAAGGGAGGTTTGAAGGTGTCACAGATCTCTCTCATCCTGATCGGATTCGTGTGTGCT
TCTGTTCTTCTTTTGGCATATGTGAAGAGCCTACTTCTTTCTTCTTCAGTACTACCTCAG
AATCATGTCTTGCAGCTTTCTCCAGATCTTAGAGTGAAAGATGAAGAAGCTTTGGGAGAA
GGAAGCGGATCGGAGCAATCACAAGACAGTGTTAACTTTGAATCTGAAAAATATCCTACT
TATGCAAACTCTTCACCGGTGATTAAGGTGACTGAAGAGTTGATTACTCATGAAGAAAGA
GGAGGTATTGCTCCGAATATCACTGAAAAAGGAGATTCAAAAGATGTTTCAGACAAAAAA
ACTGGTTTAATAGAGCAGGAAATTGACGTTTCCACTGCTGTGAGTTCTGGGGGTGAACAT
AGTGACAATTTTACAGCAACCCCGGAAAGACAAGATTGCAACTTTGCTAAAGGCAGATGG
GTCATAGATGATAGCCGACCTTTATATTCTGGATTTGGCTGTAAGCAATGGTTGTCATCT
ATGTGGGCTTGTCGCTTGACACAACGTACAGATTTTGAATATGAAAAGTTACGTTGGCGA
CCCAAAAATTGTGAGATGGAAGATTTTACTGGTGTTAAATTTCTGAAAAGGATGCAAAAC
AAAACTCTGGCGTTTATCGGGGATTCGCTTGGTAGACAGCAATTTCAGTCACTTATGTGT
ATGATTAGTGGTGGAAAAGATAGACCTAATGTTCTTGATGTGGGGCATGAATATGGTCTA
GTGCAATCTCGTGGTTCTGGTCGACCTGATGGATGGGCTTTTCGATTTCCAGACACCAAA
ACAACTATTCTTTATTATTGGTCTGCTAGTCTCTGTGACTTGACACCTATAAATCCATCT
GATCCTGCTACTGATTACGCCATGCACCTGGACCGTCCTCCAGCATTTTTGAGTCATTTC
CTTCCAAGGTTCGATGTCCTTGTTCTAAACACAGGACACCATTGGAATAGAGGAAAGCTT
AAGGCCAATCGATGGGTCATGTATGTAGGTGGTGTCCCTAATACAAACCGGAAGATTGTG
ACTATAGGTGGTGCCAAGAATTTCACAATCCACAGTATTGTCAATTGGGTGAACTCACAG
CTGCCAAAATACCCTCATGTAAAAGCATTCTATCGGACTATATCCCCCAGACATTTCTTT
AACGGAGATTGGAACACAGGAGGTACATGTGACAACACTACACCACTTTCCGAAGGGAAG
GAGGTTTTACAAGACGAATCAAGTGACTATGATGCAGCACGTGCTGTTAGAGGAACAGAC
GTTAAGCTTTTGGACATCACTGCTTTATCCCAGCTGAGAGATGAAGGTCATATATCTCGA
TACAGCATCAAAGCAACACCAGGTGTCCAGGATTGTCTACATTGGTGCTTACCAGGTGTT
CCAGATACATGGAATGAAATTCTTTTTGCTCAAATTTGA

Peptide Sequence

PEP ID

Solyc12g009150.2.1
PEP Infomation

TRICHOME BIREFRINGENCE-LIKE 16 (AHRD V3.3 *** AT5G20680.5)
Sequence

MKGGLKVSQISLILIGFVCASVLLLAYVKSLLLSSSVLPQNHVLQLSPDLRVKDEEALGE
GSGSEQSQDSVNFESEKYPTYANSSPVIKVTEELITHEERGGIAPNITEKGDSKDVSDKK
TGLIEQEIDVSTAVSSGGEHSDNFTATPERQDCNFAKGRWVIDDSRPLYSGFGCKQWLSS
MWACRLTQRTDFEYEKLRWRPKNCEMEDFTGVKFLKRMQNKTLAFIGDSLGRQQFQSLMC
MISGGKDRPNVLDVGHEYGLVQSRGSGRPDGWAFRFPDTKTTILYYWSASLCDLTPINPS
DPATDYAMHLDRPPAFLSHFLPRFDVLVLNTGHHWNRGKLKANRWVMYVGGVPNTNRKIV
TIGGAKNFTIHSIVNWVNSQLPKYPHVKAFYRTISPRHFFNGDWNTGGTCDNTTPLSEGK
EVLQDESSDYDAARAVRGTDVKLLDITALSQLRDEGHISRYSIKATPGVQDCLHWCLPGV
PDTWNEILFAQI*

Transcript Sequence

Transcript ID

Solyc12g009150.2.1
Transcript Infomation

TRICHOME BIREFRINGENCE-LIKE 16 (AHRD V3.3 *** AT5G20680.5)
Sequence

AACTACACCACAGTCGTCATCGGTTAATGTATTAGTATCATTTTCACACTAACCCCACCC
CCACCCCACCTGTCCACTTCTTCTCTAACACTTCAATCTTCATGCACCTCATCTAGCCAT
TTTTTCTCTATTTTCTTGAATTGATTCTTAACTTCAGATGTTTTTCAACTCAAATTCATC
ATTCTTACACAATTTAATCTATTGATTACCTTCATAAATCATTTCTACATCATCAATCCT
ACGTTTTCCAGGTTCAAATTCATCCAATTTTTAGATGTTACTCTGAAGCAAAAATAATGT
CCATTGTGGTGGAATGAGTTCAAGTCCAAACATCCCTAAGCTTCAAGGATGAAGGGAGGT
TTGAAGGTGTCACAGATCTCTCTCATCCTGATCGGATTCGTGTGTGCTTCTGTTCTTCTT
TTGGCATATGTGAAGAGCCTACTTCTTTCTTCTTCAGTACTACCTCAGAATCATGTCTTG
CAGCTTTCTCCAGATCTTAGAGTGAAAGATGAAGAAGCTTTGGGAGAAGGAAGCGGATCG
GAGCAATCACAAGACAGTGTTAACTTTGAATCTGAAAAATATCCTACTTATGCAAACTCT
TCACCGGTGATTAAGGTGACTGAAGAGTTGATTACTCATGAAGAAAGAGGAGGTATTGCT
CCGAATATCACTGAAAAAGGAGATTCAAAAGATGTTTCAGACAAAAAAACTGGTTTAATA
GAGCAGGAAATTGACGTTTCCACTGCTGTGAGTTCTGGGGGTGAACATAGTGACAATTTT
ACAGCAACCCCGGAAAGACAAGATTGCAACTTTGCTAAAGGCAGATGGGTCATAGATGAT
AGCCGACCTTTATATTCTGGATTTGGCTGTAAGCAATGGTTGTCATCTATGTGGGCTTGT
CGCTTGACACAACGTACAGATTTTGAATATGAAAAGTTACGTTGGCGACCCAAAAATTGT
GAGATGGAAGATTTTACTGGTGTTAAATTTCTGAAAAGGATGCAAAACAAAACTCTGGCG
TTTATCGGGGATTCGCTTGGTAGACAGCAATTTCAGTCACTTATGTGTATGATTAGTGGT
GGAAAAGATAGACCTAATGTTCTTGATGTGGGGCATGAATATGGTCTAGTGCAATCTCGT
GGTTCTGGTCGACCTGATGGATGGGCTTTTCGATTTCCAGACACCAAAACAACTATTCTT
TATTATTGGTCTGCTAGTCTCTGTGACTTGACACCTATAAATCCATCTGATCCTGCTACT
GATTACGCCATGCACCTGGACCGTCCTCCAGCATTTTTGAGTCATTTCCTTCCAAGGTTC
GATGTCCTTGTTCTAAACACAGGACACCATTGGAATAGAGGAAAGCTTAAGGCCAATCGA
TGGGTCATGTATGTAGGTGGTGTCCCTAATACAAACCGGAAGATTGTGACTATAGGTGGT
GCCAAGAATTTCACAATCCACAGTATTGTCAATTGGGTGAACTCACAGCTGCCAAAATAC
CCTCATGTAAAAGCATTCTATCGGACTATATCCCCCAGACATTTCTTTAACGGAGATTGG
AACACAGGAGGTACATGTGACAACACTACACCACTTTCCGAAGGGAAGGAGGTTTTACAA
GACGAATCAAGTGACTATGATGCAGCACGTGCTGTTAGAGGAACAGACGTTAAGCTTTTG
GACATCACTGCTTTATCCCAGCTGAGAGATGAAGGTCATATATCTCGATACAGCATCAAA
GCAACACCAGGTGTCCAGGATTGTCTACATTGGTGCTTACCAGGTGTTCCAGATACATGG
AATGAAATTCTTTTTGCTCAAATTTGATATACCTTGACTCTGCAAACGACTGGTGTTGAA
ACTTGAAACTTCTTCTCCATCTGCCATCAAAGGAACGCGAGTTGCCAAATGATGCAGTAT
ATGAGTATTATCGCGAAATCTTTGATCCATGGAGATACTATATGACTTACACATTATAGA
GAGAACTACAGCTGCTGCTTTGCCATATGCTAAGAAGAGGAGCCTTTTTTTTTTTAGGTT
GGAAGAGAGCTCCACCATTGATCTATATACTATATATTCCACATGAGTTTATACTCTTTT
AGAAATATGAGAAAATTATCCAAAGGTTATTTATGGCTATTTTTATATGTTTCCATTTTC
TTATTGAAGTATATTTCATAGCTGAACTTTTTTCTAAAAATTTCCAGTACTATGAGGATT
AATGTAATAGGCATGTATGACATTATCACACTAGAGCAGGTTTACTCGGTGCGCACCTAA
AGAGTAGCGAAGTTTACTCATAGAGCAAACTTACTCATTGCGCACTTAAAGAGTAGAGAG
TAGACTTACTCATTGCGTACTAGAGTAGTGAAGTTCACTCCGTGCGCATCTGAAATGTAG
TGGTGTTTACATCGAGTGCAGGTTTACTTAGTGCGCACTTAAAGAGTAGCGATTTTCCTG
ATAATTTCCAAAAAGAATATGCATGAAATTGAAATTACAAGATTAAAATAGCATTAAGCC
AAATCCAAGTTTTTTTTTATATAAAAATTATAGAGTCGTTTGAACTTTGCTTTGAAGTTA
AAAATTTT