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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g009080.2.1
CDS Infomation

OBP3-RESPONSIVE GENE 4 family protein (AHRD V3.3 *** U5FFX8_POPTR)
Sequence

ATGGAGGAGGGCGGTTTGAGTCAAAGTGGAGAAGAACCTAAATCATGGGATGAGCTTTAC
AATGTCAATCTGATGCCTTCGGAGATTTTTCTCAAGTTCAGAAAAGAAATTGAGGGCTAT
CGAGTTGGTGTTAACTTGGAGTTTTACAATGCCCCATACAATGAATATCTGGCTAAGTTG
GTCTTAAAACCTTTAGCCCCTGAGCGGAGATGGAAGTTCATATATGAGCCTTTGAATCAT
GAAGTCCGCCTTCTTTCCAAGAAGATCCCGGTGACAAAATTTCTAAATCTTCAGGTTGGT
GTAGGCCATAGCTTTAAGTTGCAGGCAACAGGTTGGAAATGGAAGCTCACGTCTTGTTTC
GGCGGAGATGGTATCTCCAGCATCCGGAATAAAACATCGCTTGGATTATGTCCTGGTGTG
GATTTCCGTTTTGGATGGAAAGCAGATTATGTATTTCCAGAAGTTACTGGGCAAGGCTTT
AGGCACTGGTGA

Peptide Sequence

PEP ID

Solyc12g009080.2.1
PEP Infomation

OBP3-RESPONSIVE GENE 4 family protein (AHRD V3.3 *** U5FFX8_POPTR)
Sequence

MEEGGLSQSGEEPKSWDELYNVNLMPSEIFLKFRKEIEGYRVGVNLEFYNAPYNEYLAKL
VLKPLAPERRWKFIYEPLNHEVRLLSKKIPVTKFLNLQVGVGHSFKLQATGWKWKLTSCF
GGDGISSIRNKTSLGLCPGVDFRFGWKADYVFPEVTGQGFRHW*

Transcript Sequence

Transcript ID

Solyc12g009080.2.1
Transcript Infomation

OBP3-RESPONSIVE GENE 4 family protein (AHRD V3.3 *** U5FFX8_POPTR)
Sequence

AAAAATAACTATATTTATTATTAATTAAAACTAAACCCTTTTTTATAATTCTTAAAGTTC
AAATTCACTCTCTTCTCTCTCCGTTGCAGTTATCCTCAAGTTTGAATTGATTCTCGGGTA
CGAGAATGGAGGAGGGCGGTTTGAGTCAAAGTGGAGAAGAACCTAAATCATGGGATGAGC
TTTACAATGTCAATCTGATGCCTTCGGAGATTTTTCTCAAGTTCAGAAAAGAAATTGAGG
GCTATCGAGTTGGTGTTAACTTGGAGTTTTACAATGCCCCATACAATGAATATCTGGCTA
AGTTGGTCTTAAAACCTTTAGCCCCTGAGCGGAGATGGAAGTTCATATATGAGCCTTTGA
ATCATGAAGTCCGCCTTCTTTCCAAGAAGATCCCGGTGACAAAATTTCTAAATCTTCAGG
TTGGTGTAGGCCATAGCTTTAAGTTGCAGGCAACAGGTTGGAAATGGAAGCTCACGTCTT
GTTTCGGCGGAGATGGTATCTCCAGCATCCGGAATAAAACATCGCTTGGATTATGTCCTG
GTGTGGATTTCCGTTTTGGATGGAAAGCAGATTATGTATTTCCAGAAGTTACTGGGCAAG
GCTTTAGGCACTGGTGAACCGTTGTTCAATATGAATTCTGGACGACTACAAGCGTCACTG
GATAGAGTGGAGGCCATCTTTTCCCAATAAGCACAGCCCATTCTTGGACATGTTATTGAT
TGATATTGACATTTCCCAACAAATTATCGACCTCCTAGAAAATGTTGAAGAAATAATCGA
GGGAGAGTTGGTTGACCACAGCTACACAAGAGTACCAAAGGAAGGAGGCAGAGGCGGAAC
CAGAATTTTTAGGCTCATGGCACATATTTCTTATTCTTCTTGCTAGATCTAAGAAGTCTA
TCACTATATTAGTTTTGAGGCAAAGAATTAGCCCAGATAATAAAGTGTGTTAATTTTCTC
ATTCAAATTTTCTCATTCAATTATTGTTGCTTTTGTTGTTTTTTTATGTGTATATTAACC
CTTCAGATTGAAAATTTTGACTCCATTACTACTCATATCGTAATTTTTATGAGTTTATAT
GATAGATTGTTGGACTAATATGGTACTAACAATTAGTGCAAAATTATTGGT